Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS03370

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
691,431	+				-0.6
691,432	-				+0.3
691,473	+				-0.7
691,473	+				-2.1
691,474	-				+2.3
691,474	-				+0.7
691,595	+				-0.6
691,596	-				+0.0
691,612	+				+2.5
691,629	+				-1.5
691,630	-				-0.1
691,630	-				-0.8
692,378	+				+0.3
692,378	+				+2.1
692,378	+				+0.3
692,473	+		LU632_RS03370	0.35	+1.2
692,614	+				+0.4
692,615	-				+0.5
692,615	-				+1.7
692,615	-				+1.0
692,665	+		LU632_RS03375	0.11	-0.1
692,666	-		LU632_RS03375	0.11	+0.3
692,668	+		LU632_RS03375	0.12	-0.0
692,668	+		LU632_RS03375	0.12	+0.9
692,742	+		LU632_RS03375	0.24	+0.3
692,742	+		LU632_RS03375	0.24	+0.5
692,743	-		LU632_RS03375	0.24	+0.3
692,785	+		LU632_RS03375	0.31	-1.3
692,785	+		LU632_RS03375	0.31	-0.7
692,786	-		LU632_RS03375	0.31	-0.4
692,822	+		LU632_RS03375	0.37	+0.2
692,823	-		LU632_RS03375	0.37	+1.4
692,823	-		LU632_RS03375	0.37	-1.7
692,856	+		LU632_RS03375	0.42	-4.0
692,860	+		LU632_RS03375	0.43	+0.5
692,958	+		LU632_RS03375	0.59	+1.9
693,167	+				+0.8
693,168	-				+0.2
693,168	-				+0.0
693,168	-				-1.3
693,196	+				+1.6
693,197	-				+0.5
693,197	-				+0.6
693,198	+				+0.1
693,199	-				+0.8
693,199	-				+1.1
693,399	-				+3.2
693,474	+				-0.2
693,527	-				+0.7
693,561	-				+0.4