Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00635

Experiment: Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 5 Petiole 1 (TE2-S-C5-P1)
130,095	-	adhP	LU632_RS00630	0.44	+0.4
130,146	-	adhP	LU632_RS00630	0.50	+0.2
130,146	-	adhP	LU632_RS00630	0.50	-2.2
130,165	+	adhP	LU632_RS00630	0.51	+0.0
130,181	+	adhP	LU632_RS00630	0.53	+0.9
130,225	+	adhP	LU632_RS00630	0.57	+1.0
130,226	-	adhP	LU632_RS00630	0.57	-1.2
130,226	-	adhP	LU632_RS00630	0.57	-0.3
130,275	+	adhP	LU632_RS00630	0.62	-1.5
130,370	-	adhP	LU632_RS00630	0.72	+0.7
130,585	+				-0.2
130,586	-				-3.2
130,588	+				+1.2
130,656	-				+1.0
130,730	-				-0.4
130,855	+				+2.4
130,867	-				-2.9
130,943	+				-0.2
131,001	-				+0.2
131,022	+				+1.5
131,137	-		LU632_RS00635	0.32	-0.1
131,156	+		LU632_RS00635	0.43	-0.9
131,204	+		LU632_RS00635	0.69	-2.6
131,303	+				+0.4
131,304	-				-1.0
131,308	+				+1.2
131,309	-				-2.8
131,309	-				-1.8
131,331	-				+0.0
131,365	+				+3.9
131,365	+				+2.2
131,366	-				+0.4
131,366	-				-2.0
131,369	-				-2.3
131,396	+				+1.6
131,427	-				+0.3
131,437	-				-0.1
131,683	+				+0.7
131,846	+				-1.1