Strain Fitness in Erwinia amylovora T8 around OLJFJH_18025

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
3,785,434	-		OLJFJH_18015	0.13	+1.4
3,785,450	+		OLJFJH_18015	0.15	-1.3
3,785,471	-		OLJFJH_18015	0.19	-0.7
3,785,496	-		OLJFJH_18015	0.23	-0.1
3,785,496	-		OLJFJH_18015	0.23	-0.4
3,785,496	-		OLJFJH_18015	0.23	-0.4
3,785,542	+		OLJFJH_18015	0.30	-0.9
3,785,598	+		OLJFJH_18015	0.39	-1.3
3,785,603	+		OLJFJH_18015	0.40	-1.1
3,785,603	+		OLJFJH_18015	0.40	-0.2
3,785,604	-		OLJFJH_18015	0.40	-0.4
3,785,639	-		OLJFJH_18015	0.46	+0.0
3,785,840	+		OLJFJH_18015	0.79	-1.5
3,785,887	+		OLJFJH_18015	0.86	-2.4
3,785,887	+		OLJFJH_18015	0.86	-2.8
3,785,888	-		OLJFJH_18015	0.86	-2.3
3,785,888	-		OLJFJH_18015	0.86	-2.1
3,785,888	-		OLJFJH_18015	0.86	-1.1
3,785,969	+				-1.3
3,785,969	+				-1.0
3,785,970	-				+0.4
3,785,970	-				+0.1
3,785,970	-				+0.9
3,786,022	+		OLJFJH_18020	0.15	-0.9
3,786,022	+		OLJFJH_18020	0.15	-1.0
3,786,023	-		OLJFJH_18020	0.16	-2.4
3,786,023	-		OLJFJH_18020	0.16	-2.6
3,786,023	-		OLJFJH_18020	0.16	-0.4
3,786,025	-		OLJFJH_18020	0.16	+1.6
3,786,025	-		OLJFJH_18020	0.16	-0.1
3,786,025	-		OLJFJH_18020	0.16	-0.1
3,786,096	+		OLJFJH_18020	0.38	-1.3
3,786,097	-		OLJFJH_18020	0.38	-1.3
3,786,228	+		OLJFJH_18020	0.78	-1.7
3,786,280	+				-1.4
3,786,280	+				+0.7
3,786,280	+				+0.6
3,786,307	+				-0.3
3,786,307	+				-0.3
3,786,326	+				+0.7
3,786,447	+		OLJFJH_18025	0.15	-1.4
3,786,476	+		OLJFJH_18025	0.18	+0.7
3,786,477	-		OLJFJH_18025	0.18	-0.3
3,786,615	-		OLJFJH_18025	0.34	-2.6
3,786,615	-		OLJFJH_18025	0.34	-0.8
3,786,681	-		OLJFJH_18025	0.41	+0.2
3,786,690	-		OLJFJH_18025	0.42	-0.3
3,786,811	+		OLJFJH_18025	0.56	-1.0
3,786,914	-		OLJFJH_18025	0.68	-2.1
3,786,944	+		OLJFJH_18025	0.71	+0.2
3,786,944	+		OLJFJH_18025	0.71	-1.8
3,786,945	-		OLJFJH_18025	0.71	+0.7
3,786,946	+		OLJFJH_18025	0.71	-2.6
3,786,959	-		OLJFJH_18025	0.73	-1.3
3,787,067	-		OLJFJH_18025	0.85	-1.3
3,787,190	+				-0.4
3,787,190	+				+0.2
3,787,190	+				-2.0
3,787,191	-				+0.9
3,787,300	-				-0.0
3,787,427	-				-0.7
3,787,443	+				-0.5
3,787,498	+		OLJFJH_18030	0.12	+0.5
3,787,498	+		OLJFJH_18030	0.12	-0.2
3,787,498	+		OLJFJH_18030	0.12	+1.0
3,787,499	-		OLJFJH_18030	0.12	+1.2
3,787,499	-		OLJFJH_18030	0.12	-0.3
3,787,499	-		OLJFJH_18030	0.12	+0.3
3,787,499	-		OLJFJH_18030	0.12	-0.2
3,787,499	-		OLJFJH_18030	0.12	-0.7
3,787,499	-		OLJFJH_18030	0.12	+0.0
3,787,500	+		OLJFJH_18030	0.12	-1.4
3,787,500	+		OLJFJH_18030	0.12	-0.9
3,787,500	+		OLJFJH_18030	0.12	-0.5
3,787,501	-		OLJFJH_18030	0.12	-1.5
3,787,501	-		OLJFJH_18030	0.12	+0.0
3,787,501	-		OLJFJH_18030	0.12	-0.5
3,787,501	-		OLJFJH_18030	0.12	+0.2
3,787,501	-		OLJFJH_18030	0.12	-0.6
3,787,501	-		OLJFJH_18030	0.12	-0.4
3,787,563	-		OLJFJH_18030	0.17	+1.1
3,787,733	+		OLJFJH_18030	0.29	+1.7
3,787,734	-		OLJFJH_18030	0.30	+0.5
3,787,769	+		OLJFJH_18030	0.32	+0.2
3,787,976	-		OLJFJH_18030	0.47	-0.7
3,787,982	-		OLJFJH_18030	0.48	+1.0
3,787,982	-		OLJFJH_18030	0.48	-0.7
3,788,096	+		OLJFJH_18030	0.56	-1.2
3,788,096	+		OLJFJH_18030	0.56	-0.8
3,788,097	-		OLJFJH_18030	0.56	+0.3
3,788,132	+		OLJFJH_18030	0.59	+0.6
3,788,132	+		OLJFJH_18030	0.59	+0.0
3,788,133	-		OLJFJH_18030	0.59	-0.6
3,788,133	-		OLJFJH_18030	0.59	+1.0
3,788,135	+		OLJFJH_18030	0.59	-0.8
3,788,136	-		OLJFJH_18030	0.59	-0.1
3,788,139	+		OLJFJH_18030	0.59	-0.7