Strain Fitness in Erwinia amylovora T8 around OLJFJH_17850

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
3,748,939	-				-0.4
3,748,958	+				+0.8
3,748,958	+				-0.3
3,748,958	+				+0.2
3,748,958	-				-0.0
3,748,959	-				-0.3
3,748,959	-				+0.1
3,748,959	-				+0.8
3,748,978	+				-0.8
3,748,978	+				-0.1
3,748,979	-				-0.1
3,748,979	-				-0.3
3,749,029	+		OLJFJH_17840	0.33	+0.2
3,749,035	-		OLJFJH_17840	0.37	-0.7
3,749,035	-		OLJFJH_17840	0.37	-0.2
3,749,084	-		OLJFJH_17840	0.70	+0.4
3,749,088	+		OLJFJH_17840	0.73	-0.6
3,749,088	+		OLJFJH_17840	0.73	-1.8
3,749,089	-		OLJFJH_17840	0.73	+0.4
3,749,089	-		OLJFJH_17840	0.73	-0.6
3,749,089	-		OLJFJH_17840	0.73	+0.4
3,749,089	-		OLJFJH_17840	0.73	+0.0
3,749,164	+				-0.0
3,749,164	+				+1.9
3,749,165	-				-0.0
3,749,181	+				-1.8
3,749,181	+				-0.9
3,749,181	+				+0.9
3,749,181	+				-0.4
3,749,234	+		OLJFJH_17845	0.15	+0.2
3,749,238	+		OLJFJH_17845	0.16	+0.3
3,749,266	+		OLJFJH_17845	0.20	+0.7
3,749,267	-		OLJFJH_17845	0.21	+0.3
3,749,330	+		OLJFJH_17845	0.30	+0.1
3,749,331	-		OLJFJH_17845	0.31	+0.6
3,749,352	+		OLJFJH_17845	0.34	-0.0
3,749,375	-		OLJFJH_17845	0.37	-0.1
3,749,434	+		OLJFJH_17845	0.47	-0.1
3,749,435	-		OLJFJH_17845	0.47	+0.2
3,749,491	+		OLJFJH_17845	0.56	+0.2
3,749,491	+		OLJFJH_17845	0.56	+0.2
3,749,492	-		OLJFJH_17845	0.56	+0.4
3,749,492	-		OLJFJH_17845	0.56	+0.2
3,749,492	-		OLJFJH_17845	0.56	-0.2
3,749,492	-		OLJFJH_17845	0.56	-1.2
3,749,492	-		OLJFJH_17845	0.56	+0.2
3,749,630	-		OLJFJH_17845	0.77	-0.4
3,749,681	+		OLJFJH_17845	0.85	+0.0
3,749,681	+		OLJFJH_17845	0.85	-0.8
3,749,682	-		OLJFJH_17845	0.85	+1.2
3,749,682	-		OLJFJH_17845	0.85	+0.2
3,749,682	-		OLJFJH_17845	0.85	+1.3
3,749,684	+		OLJFJH_17845	0.86	-0.1
3,749,685	-		OLJFJH_17845	0.86	+0.0
3,749,724	+				-0.4
3,749,724	+				-0.6
3,749,724	+				-1.1
3,749,724	+				-0.3
3,749,725	-				+1.0
3,749,725	-				-1.5
3,749,725	-				+0.3
3,749,727	-				+0.2
3,749,803	+				+0.7
3,749,807	+				+0.1
3,749,808	-				-1.9
3,749,828	+				+0.7
3,749,828	+				+0.5
3,749,830	+				+0.1
3,750,038	+		OLJFJH_17850	0.11	-1.1
3,750,061	-		OLJFJH_17850	0.13	-1.6
3,750,136	-		OLJFJH_17850	0.19	-1.2
3,750,188	+		OLJFJH_17850	0.23	-1.1
3,750,189	-		OLJFJH_17850	0.24	-1.0
3,750,211	+		OLJFJH_17850	0.25	-1.9
3,750,211	+		OLJFJH_17850	0.25	-1.0
3,750,212	-		OLJFJH_17850	0.25	-1.2
3,750,212	-		OLJFJH_17850	0.25	-0.4
3,750,212	-		OLJFJH_17850	0.25	-0.6
3,750,280	-		OLJFJH_17850	0.31	-0.8
3,750,287	+		OLJFJH_17850	0.32	-2.4
3,750,315	+		OLJFJH_17850	0.34	-1.5
3,750,315	+		OLJFJH_17850	0.34	-1.6
3,750,316	-		OLJFJH_17850	0.34	-1.6
3,750,319	+		OLJFJH_17850	0.34	-0.9
3,750,319	+		OLJFJH_17850	0.34	-4.3
3,750,319	+		OLJFJH_17850	0.34	-1.0
3,750,319	+		OLJFJH_17850	0.34	+0.6
3,750,319	+		OLJFJH_17850	0.34	-1.7
3,750,320	-		OLJFJH_17850	0.35	-1.0
3,750,320	-		OLJFJH_17850	0.35	-1.1
3,750,320	-		OLJFJH_17850	0.35	-2.0
3,750,320	-		OLJFJH_17850	0.35	-0.8
3,750,321	+		OLJFJH_17850	0.35	-1.2
3,750,417	+		OLJFJH_17850	0.43	-0.8
3,750,465	+		OLJFJH_17850	0.47	+1.7
3,750,465	+		OLJFJH_17850	0.47	-0.3
3,750,511	-		OLJFJH_17850	0.51	-0.7
3,750,528	-		OLJFJH_17850	0.52	-0.5
3,750,547	+		OLJFJH_17850	0.54	-0.4
3,750,547	+		OLJFJH_17850	0.54	-0.9
3,750,547	+		OLJFJH_17850	0.54	-1.8
3,750,548	-		OLJFJH_17850	0.54	-1.2
3,750,548	-		OLJFJH_17850	0.54	-1.3
3,750,557	+		OLJFJH_17850	0.54	-0.3
3,750,557	+		OLJFJH_17850	0.54	-1.7
3,750,558	-		OLJFJH_17850	0.54	-2.6
3,750,580	-		OLJFJH_17850	0.56	-0.8
3,750,671	-		OLJFJH_17850	0.64	-1.3
3,750,686	+		OLJFJH_17850	0.65	-0.9
3,750,690	-		OLJFJH_17850	0.65	-1.9
3,750,729	+		OLJFJH_17850	0.69	-0.8
3,750,729	+		OLJFJH_17850	0.69	-0.8
3,750,729	+		OLJFJH_17850	0.69	-1.1
3,750,729	+		OLJFJH_17850	0.69	-1.4
3,750,729	+		OLJFJH_17850	0.69	-1.8
3,750,730	-		OLJFJH_17850	0.69	-2.0
3,750,810	+		OLJFJH_17850	0.76	-0.2
3,750,810	+		OLJFJH_17850	0.76	-1.5
3,750,811	-		OLJFJH_17850	0.76	-1.6
3,750,830	+		OLJFJH_17850	0.77	-1.4
3,750,879	+		OLJFJH_17850	0.81	-2.5
3,750,880	-		OLJFJH_17850	0.81	-1.8
3,750,938	+		OLJFJH_17850	0.86	-1.7
3,750,945	+		OLJFJH_17850	0.87	-2.0
3,750,946	-		OLJFJH_17850	0.87	-1.7
3,750,991	-				-2.0
3,751,115	+				-3.3
3,751,115	+				-0.5
3,751,115	+				-0.9
3,751,115	+				-1.1
3,751,116	-				+0.3
3,751,116	-				+0.8
3,751,124	-				-1.6
3,751,145	-				-3.3
3,751,174	+				-1.4
3,751,174	+				-2.9
3,751,174	+				-1.4
3,751,175	-				-0.8
3,751,225	+				+1.4
3,751,322	-				-1.1
3,751,346	+				-4.0
3,751,346	+				-0.9
3,751,346	+				-0.9
3,751,346	+				-0.8
3,751,346	+				-1.3
3,751,346	+				-2.9
3,751,346	+				-1.3
3,751,346	+				-3.0
3,751,346	+				-1.8
3,751,346	+				-2.1
3,751,347	-				-1.0
3,751,347	-				-1.6
3,751,347	-				-2.0
3,751,347	-				-0.2
3,751,347	-				-1.5
3,751,347	-				-0.9
3,751,347	-				+0.5
3,751,444	+		OLJFJH_17855	0.10	-1.6
3,751,444	+		OLJFJH_17855	0.10	-1.0
3,751,576	+		OLJFJH_17855	0.15	-0.2
3,751,576	+		OLJFJH_17855	0.15	-1.9
3,751,577	-		OLJFJH_17855	0.15	-2.0
3,751,597	+		OLJFJH_17855	0.15	-0.6
3,751,598	-		OLJFJH_17855	0.15	-2.0
3,751,598	-		OLJFJH_17855	0.15	-2.6
3,751,601	-		OLJFJH_17855	0.15	-0.5
3,751,696	+		OLJFJH_17855	0.18	-1.2
3,751,696	+		OLJFJH_17855	0.18	-1.2
3,751,697	-		OLJFJH_17855	0.18	-1.4
3,751,727	-		OLJFJH_17855	0.19	-1.2
3,751,727	-		OLJFJH_17855	0.19	+0.2
3,751,729	+		OLJFJH_17855	0.19	-1.3
3,751,896	+		OLJFJH_17855	0.25	-1.0
3,751,897	-		OLJFJH_17855	0.25	-1.8
3,751,918	+		OLJFJH_17855	0.25	-0.5
3,751,919	-		OLJFJH_17855	0.25	-1.8
3,751,940	+		OLJFJH_17855	0.26	-1.1
3,751,940	+		OLJFJH_17855	0.26	-1.6
3,751,949	-		OLJFJH_17855	0.26	-0.6
3,751,958	+		OLJFJH_17855	0.27	-1.3
3,751,959	-		OLJFJH_17855	0.27	-0.0
3,752,050	+		OLJFJH_17855	0.30	-0.1
3,752,051	-		OLJFJH_17855	0.30	-2.1