Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_12960 and OLJFJH_12965 are separated by 54 nucleotides OLJFJH_12965 and OLJFJH_12970 are separated by 175 nucleotides
OLJFJH_12960: OLJFJH_12960 - 2OG-Fe dioxygenase family protein, at 2,729,528 to 2,730,274
_12960
OLJFJH_12965: OLJFJH_12965 - Lysine exporter LysO, at 2,730,329 to 2,731,219
_12965
OLJFJH_12970: OLJFJH_12970 - AI-2E family transporter, at 2,731,395 to 2,732,513
_12970
Position (kb)
2730
2731
2732 Strain fitness (log2 ratio)
-1
0
1
2 at 2729.332 kb on + strand at 2729.605 kb on + strand, within OLJFJH_12960 at 2729.605 kb on + strand, within OLJFJH_12960 at 2729.605 kb on + strand, within OLJFJH_12960 at 2729.635 kb on + strand, within OLJFJH_12960 at 2729.635 kb on + strand, within OLJFJH_12960 at 2729.673 kb on - strand, within OLJFJH_12960 at 2729.731 kb on + strand, within OLJFJH_12960 at 2729.910 kb on - strand, within OLJFJH_12960 at 2729.928 kb on + strand, within OLJFJH_12960 at 2729.965 kb on + strand, within OLJFJH_12960 at 2730.018 kb on + strand, within OLJFJH_12960 at 2730.018 kb on + strand, within OLJFJH_12960 at 2730.019 kb on - strand, within OLJFJH_12960 at 2730.069 kb on + strand, within OLJFJH_12960 at 2730.069 kb on + strand, within OLJFJH_12960 at 2730.092 kb on + strand, within OLJFJH_12960 at 2730.187 kb on - strand, within OLJFJH_12960 at 2730.450 kb on + strand, within OLJFJH_12965 at 2730.622 kb on + strand, within OLJFJH_12965 at 2730.878 kb on - strand, within OLJFJH_12965 at 2731.396 kb on + strand at 2731.710 kb on + strand, within OLJFJH_12970 at 2731.809 kb on + strand, within OLJFJH_12970 at 2731.878 kb on + strand, within OLJFJH_12970 at 2731.973 kb on - strand, within OLJFJH_12970 at 2732.005 kb on + strand, within OLJFJH_12970 at 2732.006 kb on - strand, within OLJFJH_12970 at 2732.049 kb on - strand, within OLJFJH_12970 at 2732.049 kb on - strand, within OLJFJH_12970 at 2732.052 kb on + strand, within OLJFJH_12970 at 2732.052 kb on + strand, within OLJFJH_12970 at 2732.053 kb on - strand, within OLJFJH_12970 at 2732.053 kb on - strand, within OLJFJH_12970
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-6 remove 2,729,332 + +0.9 2,729,605 + OLJFJH_12960 0.10 -1.6 2,729,605 + OLJFJH_12960 0.10 +1.0 2,729,605 + OLJFJH_12960 0.10 +0.2 2,729,635 + OLJFJH_12960 0.14 +0.5 2,729,635 + OLJFJH_12960 0.14 -0.6 2,729,673 - OLJFJH_12960 0.19 +0.1 2,729,731 + OLJFJH_12960 0.27 +0.3 2,729,910 - OLJFJH_12960 0.51 +0.4 2,729,928 + OLJFJH_12960 0.54 -0.2 2,729,965 + OLJFJH_12960 0.59 +0.2 2,730,018 + OLJFJH_12960 0.66 +1.0 2,730,018 + OLJFJH_12960 0.66 +0.2 2,730,019 - OLJFJH_12960 0.66 +0.9 2,730,069 + OLJFJH_12960 0.72 -0.1 2,730,069 + OLJFJH_12960 0.72 +0.2 2,730,092 + OLJFJH_12960 0.76 +1.1 2,730,187 - OLJFJH_12960 0.88 -0.6 2,730,450 + OLJFJH_12965 0.14 -1.6 2,730,622 + OLJFJH_12965 0.33 -1.2 2,730,878 - OLJFJH_12965 0.62 -1.2 2,731,396 + +1.3 2,731,710 + OLJFJH_12970 0.28 -0.3 2,731,809 + OLJFJH_12970 0.37 -0.1 2,731,878 + OLJFJH_12970 0.43 +0.6 2,731,973 - OLJFJH_12970 0.52 -0.5 2,732,005 + OLJFJH_12970 0.55 +2.6 2,732,006 - OLJFJH_12970 0.55 -0.7 2,732,049 - OLJFJH_12970 0.58 -0.0 2,732,049 - OLJFJH_12970 0.58 -0.5 2,732,052 + OLJFJH_12970 0.59 +0.5 2,732,052 + OLJFJH_12970 0.59 +0.5 2,732,053 - OLJFJH_12970 0.59 -1.2 2,732,053 - OLJFJH_12970 0.59 -0.4
Or see this region's nucleotide sequence