Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_09305 and OLJFJH_09310 are separated by 12 nucleotides OLJFJH_09310 and OLJFJH_09315 are separated by 41 nucleotides OLJFJH_09315 and OLJFJH_09320 are separated by 328 nucleotides
OLJFJH_09305: OLJFJH_09305 - assimilatory sulfite reductase (NADPH) hemoprotein subunit, at 1,927,709 to 1,929,424
_09305
OLJFJH_09310: OLJFJH_09310 - phosphoadenylyl-sulfate reductase, at 1,929,437 to 1,930,168
_09310
OLJFJH_09315: OLJFJH_09315 - YCII domain-containing protein, at 1,930,210 to 1,930,494
_09315
OLJFJH_09320: OLJFJH_09320 - siroheme synthase CysG, at 1,930,823 to 1,932,238
_09320
Position (kb)
1929
1930
1931 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1928.486 kb on - strand, within OLJFJH_09305 at 1928.486 kb on - strand, within OLJFJH_09305 at 1928.486 kb on - strand, within OLJFJH_09305 at 1928.501 kb on - strand, within OLJFJH_09305 at 1928.510 kb on + strand, within OLJFJH_09305 at 1928.510 kb on + strand, within OLJFJH_09305 at 1928.510 kb on + strand, within OLJFJH_09305 at 1928.510 kb on + strand, within OLJFJH_09305 at 1928.510 kb on + strand, within OLJFJH_09305 at 1928.511 kb on - strand, within OLJFJH_09305 at 1928.511 kb on - strand, within OLJFJH_09305 at 1928.511 kb on - strand, within OLJFJH_09305 at 1928.551 kb on + strand, within OLJFJH_09305 at 1928.637 kb on - strand, within OLJFJH_09305 at 1928.721 kb on - strand, within OLJFJH_09305 at 1928.728 kb on + strand, within OLJFJH_09305 at 1928.941 kb on + strand, within OLJFJH_09305 at 1929.124 kb on + strand, within OLJFJH_09305 at 1929.124 kb on + strand, within OLJFJH_09305 at 1929.124 kb on + strand, within OLJFJH_09305 at 1929.125 kb on - strand, within OLJFJH_09305 at 1929.245 kb on - strand, within OLJFJH_09305 at 1929.433 kb on + strand at 1929.433 kb on + strand at 1929.433 kb on + strand at 1929.434 kb on - strand at 1929.434 kb on - strand at 1929.515 kb on - strand, within OLJFJH_09310 at 1929.515 kb on - strand, within OLJFJH_09310 at 1929.515 kb on - strand, within OLJFJH_09310 at 1929.585 kb on + strand, within OLJFJH_09310 at 1929.585 kb on + strand, within OLJFJH_09310 at 1929.585 kb on + strand, within OLJFJH_09310 at 1929.586 kb on - strand, within OLJFJH_09310 at 1929.704 kb on - strand, within OLJFJH_09310 at 1929.738 kb on + strand, within OLJFJH_09310 at 1929.738 kb on + strand, within OLJFJH_09310 at 1929.738 kb on + strand, within OLJFJH_09310 at 1929.738 kb on + strand, within OLJFJH_09310 at 1929.810 kb on + strand, within OLJFJH_09310 at 1930.013 kb on + strand, within OLJFJH_09310 at 1930.093 kb on + strand, within OLJFJH_09310 at 1930.094 kb on - strand, within OLJFJH_09310 at 1930.166 kb on + strand at 1930.167 kb on - strand at 1930.274 kb on + strand, within OLJFJH_09315 at 1930.409 kb on + strand, within OLJFJH_09315 at 1930.472 kb on + strand at 1930.472 kb on + strand at 1930.472 kb on + strand at 1930.473 kb on - strand at 1930.481 kb on - strand at 1930.481 kb on - strand at 1930.490 kb on + strand at 1930.490 kb on + strand at 1930.490 kb on + strand at 1930.490 kb on + strand at 1930.490 kb on + strand at 1930.490 kb on + strand at 1930.490 kb on + strand at 1930.494 kb on + strand at 1930.494 kb on + strand at 1930.494 kb on + strand at 1930.494 kb on + strand at 1930.495 kb on - strand at 1930.495 kb on - strand at 1930.495 kb on - strand at 1930.495 kb on - strand at 1930.690 kb on + strand at 1930.690 kb on + strand at 1930.719 kb on + strand at 1930.720 kb on - strand at 1930.720 kb on - strand at 1930.725 kb on - strand at 1930.741 kb on - strand at 1930.784 kb on + strand at 1930.784 kb on + strand at 1930.784 kb on + strand at 1930.784 kb on + strand at 1930.784 kb on + strand at 1930.784 kb on + strand at 1930.785 kb on - strand at 1930.785 kb on - strand at 1930.785 kb on - strand at 1930.785 kb on - strand at 1930.786 kb on + strand at 1930.786 kb on + strand at 1930.802 kb on + strand at 1930.802 kb on + strand at 1930.802 kb on + strand at 1930.803 kb on - strand at 1930.803 kb on - strand at 1930.803 kb on - strand at 1930.810 kb on + strand at 1930.810 kb on + strand at 1930.829 kb on + strand at 1930.830 kb on - strand at 1930.830 kb on - strand at 1930.911 kb on + strand at 1930.911 kb on + strand at 1930.912 kb on - strand at 1931.016 kb on - strand, within OLJFJH_09320 at 1931.155 kb on + strand, within OLJFJH_09320 at 1931.156 kb on - strand, within OLJFJH_09320 at 1931.156 kb on - strand, within OLJFJH_09320
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-6 remove 1,928,486 - OLJFJH_09305 0.45 -2.4 1,928,486 - OLJFJH_09305 0.45 -1.0 1,928,486 - OLJFJH_09305 0.45 -3.3 1,928,501 - OLJFJH_09305 0.46 -0.2 1,928,510 + OLJFJH_09305 0.47 -0.8 1,928,510 + OLJFJH_09305 0.47 -0.1 1,928,510 + OLJFJH_09305 0.47 +0.3 1,928,510 + OLJFJH_09305 0.47 -1.5 1,928,510 + OLJFJH_09305 0.47 -0.7 1,928,511 - OLJFJH_09305 0.47 -2.2 1,928,511 - OLJFJH_09305 0.47 -2.4 1,928,511 - OLJFJH_09305 0.47 -3.2 1,928,551 + OLJFJH_09305 0.49 -1.7 1,928,637 - OLJFJH_09305 0.54 -2.5 1,928,721 - OLJFJH_09305 0.59 -1.9 1,928,728 + OLJFJH_09305 0.59 +0.1 1,928,941 + OLJFJH_09305 0.72 -1.1 1,929,124 + OLJFJH_09305 0.82 -1.7 1,929,124 + OLJFJH_09305 0.82 -0.5 1,929,124 + OLJFJH_09305 0.82 -0.5 1,929,125 - OLJFJH_09305 0.83 -3.5 1,929,245 - OLJFJH_09305 0.90 -1.6 1,929,433 + -2.3 1,929,433 + -2.2 1,929,433 + -2.3 1,929,434 - -0.5 1,929,434 - -2.2 1,929,515 - OLJFJH_09310 0.11 -0.8 1,929,515 - OLJFJH_09310 0.11 -1.9 1,929,515 - OLJFJH_09310 0.11 -2.1 1,929,585 + OLJFJH_09310 0.20 -1.6 1,929,585 + OLJFJH_09310 0.20 -1.8 1,929,585 + OLJFJH_09310 0.20 -2.2 1,929,586 - OLJFJH_09310 0.20 -1.4 1,929,704 - OLJFJH_09310 0.36 -1.6 1,929,738 + OLJFJH_09310 0.41 -2.0 1,929,738 + OLJFJH_09310 0.41 -3.1 1,929,738 + OLJFJH_09310 0.41 -1.4 1,929,738 + OLJFJH_09310 0.41 -1.8 1,929,810 + OLJFJH_09310 0.51 -1.6 1,930,013 + OLJFJH_09310 0.79 +0.2 1,930,093 + OLJFJH_09310 0.90 -1.6 1,930,094 - OLJFJH_09310 0.90 -1.5 1,930,166 + +0.4 1,930,167 - +0.2 1,930,274 + OLJFJH_09315 0.22 +0.2 1,930,409 + OLJFJH_09315 0.70 +0.5 1,930,472 + -0.2 1,930,472 + +1.1 1,930,472 + -0.4 1,930,473 - +0.1 1,930,481 - +0.5 1,930,481 - +0.1 1,930,490 + -0.7 1,930,490 + -1.7 1,930,490 + -0.7 1,930,490 + -2.1 1,930,490 + -0.6 1,930,490 + -0.2 1,930,490 + +0.3 1,930,494 + +0.4 1,930,494 + -0.9 1,930,494 + +0.0 1,930,494 + -0.5 1,930,495 - +0.6 1,930,495 - -1.3 1,930,495 - +0.9 1,930,495 - +1.1 1,930,690 + +1.0 1,930,690 + -0.2 1,930,719 + -1.6 1,930,720 - -1.6 1,930,720 - +0.2 1,930,725 - -0.5 1,930,741 - -1.1 1,930,784 + -0.2 1,930,784 + -1.8 1,930,784 + +0.4 1,930,784 + +1.4 1,930,784 + +0.4 1,930,784 + -0.3 1,930,785 - +0.2 1,930,785 - -0.2 1,930,785 - -0.6 1,930,785 - -0.4 1,930,786 + -0.4 1,930,786 + -0.6 1,930,802 + +0.5 1,930,802 + -0.4 1,930,802 + -0.5 1,930,803 - -0.9 1,930,803 - -1.0 1,930,803 - -1.3 1,930,810 + +0.1 1,930,810 + -1.2 1,930,829 + -0.7 1,930,830 - -0.1 1,930,830 - -0.9 1,930,911 + -0.4 1,930,911 + -1.0 1,930,912 - -0.2 1,931,016 - OLJFJH_09320 0.14 -0.9 1,931,155 + OLJFJH_09320 0.23 -2.2 1,931,156 - OLJFJH_09320 0.24 -1.1 1,931,156 - OLJFJH_09320 0.24 -0.2
Or see this region's nucleotide sequence