Strain Fitness in Erwinia amylovora T8 around OLJFJH_09115

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
1,889,088	+				+0.2
1,889,154	+				-0.3
1,889,199	-				-0.3
1,889,235	-				+0.0
1,889,246	+				+0.1
1,889,247	-				-0.0
1,889,322	+		OLJFJH_09110	0.15	-0.5
1,889,347	-		OLJFJH_09110	0.19	-0.5
1,889,358	+		OLJFJH_09110	0.21	+1.3
1,889,358	+		OLJFJH_09110	0.21	-0.2
1,889,404	-		OLJFJH_09110	0.29	-0.2
1,889,458	-		OLJFJH_09110	0.39	+0.6
1,889,458	-		OLJFJH_09110	0.39	+0.4
1,889,469	+		OLJFJH_09110	0.41	+0.5
1,889,530	+		OLJFJH_09110	0.52	+0.4
1,889,530	+		OLJFJH_09110	0.52	+0.2
1,889,530	+		OLJFJH_09110	0.52	-0.4
1,889,531	-		OLJFJH_09110	0.52	-1.0
1,889,567	-		OLJFJH_09110	0.58	+0.4
1,889,602	+		OLJFJH_09110	0.65	-0.1
1,889,608	+		OLJFJH_09110	0.66	+0.1
1,889,609	-		OLJFJH_09110	0.66	-0.5
1,889,609	-		OLJFJH_09110	0.66	-0.8
1,889,609	-		OLJFJH_09110	0.66	+0.6
1,889,609	-		OLJFJH_09110	0.66	-0.4
1,889,657	+		OLJFJH_09110	0.75	-0.2
1,889,702	+		OLJFJH_09110	0.83	-0.3
1,889,790	+				-1.0
1,889,791	-				+3.0
1,889,857	+				+1.8
1,889,857	+				-0.1
1,889,858	-				-0.5
1,889,884	+				+0.7
1,889,885	-				-1.4
1,889,902	+				-0.4
1,889,903	-				-0.7
1,889,903	-				+1.1
1,889,914	-				-0.7
1,889,933	+				-0.8
1,889,966	-				-0.3
1,889,979	+				+0.2
1,890,037	+				-5.3
1,890,038	-				-2.3
1,890,057	-				-5.5
1,890,060	+				-3.6
1,890,060	+				-0.5
1,890,061	-				-3.7
1,890,062	+				-4.5
1,890,062	+				-2.7
1,890,062	+				-4.1
1,890,062	+				-1.2
1,890,062	+				-5.1
1,890,062	+				-0.2
1,890,062	+				-4.9
1,890,062	+				-2.2
1,890,063	-				-2.8
1,890,063	-				-5.8
1,890,063	-				-2.8
1,890,063	-				-1.2
1,890,063	-				-3.6
1,890,063	-				-3.1
1,890,063	-				-2.9
1,890,063	-				-3.1
1,890,063	-				-4.1
1,890,063	-				-3.7
1,890,063	-				-3.1
1,890,100	+				-5.6
1,890,229	-		OLJFJH_09115	0.18	-2.7
1,890,685	-		OLJFJH_09115	0.51	-5.2
1,890,685	-		OLJFJH_09115	0.51	-4.4
1,890,685	-		OLJFJH_09115	0.51	-4.5
1,890,753	+		OLJFJH_09115	0.56	-3.7
1,890,866	-		OLJFJH_09115	0.65	-2.9
1,890,909	-		OLJFJH_09115	0.68	-4.1
1,890,945	+		OLJFJH_09115	0.71	-3.6
1,890,948	+		OLJFJH_09115	0.71	-4.0
1,890,970	-		OLJFJH_09115	0.72	-5.7
1,890,996	+		OLJFJH_09115	0.74	-3.2
1,891,024	-		OLJFJH_09115	0.76	-5.1
1,891,026	+		OLJFJH_09115	0.76	-1.2
1,891,026	+		OLJFJH_09115	0.76	-4.7
1,891,027	-		OLJFJH_09115	0.77	-3.9
1,891,098	+		OLJFJH_09115	0.82	-1.5
1,891,099	-		OLJFJH_09115	0.82	-5.8
1,891,188	+		OLJFJH_09115	0.88	-3.8
1,891,188	+		OLJFJH_09115	0.88	-2.6
1,891,188	+		OLJFJH_09115	0.88	-3.9
1,891,192	+		OLJFJH_09115	0.89	-2.6
1,891,192	+		OLJFJH_09115	0.89	-2.8
1,891,192	+		OLJFJH_09115	0.89	-4.6
1,891,193	-		OLJFJH_09115	0.89	-1.9
1,891,193	-		OLJFJH_09115	0.89	-4.7
1,891,193	-		OLJFJH_09115	0.89	-4.8
1,891,193	-		OLJFJH_09115	0.89	-4.9
1,891,257	+				-5.3
1,891,272	+				-5.4
1,891,293	-				-3.8
1,891,332	+				-3.2
1,891,332	+				-1.7
1,891,333	-				-4.3
1,891,333	-				-4.2
1,891,333	-				-3.7
1,891,333	-				-2.8
1,891,545	-				-1.2
1,891,547	+				-0.8
1,891,548	-				-1.0
1,891,609	-				+0.2
1,891,612	-				-1.3
1,891,680	+				-0.5
1,891,748	+		OLJFJH_09120	0.14	+0.1
1,891,751	-		OLJFJH_09120	0.14	-0.0
1,891,860	-		OLJFJH_09120	0.23	+0.8
1,891,942	+		OLJFJH_09120	0.29	-0.4
1,891,948	+		OLJFJH_09120	0.30	-0.0
1,891,972	+		OLJFJH_09120	0.32	-0.4
1,892,055	-		OLJFJH_09120	0.39	-1.7
1,892,138	-		OLJFJH_09120	0.45	+0.1
1,892,138	-		OLJFJH_09120	0.45	+0.1
1,892,138	-		OLJFJH_09120	0.45	-0.6
1,892,260	+		OLJFJH_09120	0.55	-0.1
1,892,270	+		OLJFJH_09120	0.56	+0.3
1,892,270	+		OLJFJH_09120	0.56	-1.1
1,892,270	+		OLJFJH_09120	0.56	-0.5
1,892,271	-		OLJFJH_09120	0.56	-0.4
1,892,273	-		OLJFJH_09120	0.56	-0.4
1,892,297	-		OLJFJH_09120	0.58	+0.3