Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07315 and OLJFJH_07320 are separated by 91 nucleotides OLJFJH_07320 and OLJFJH_07325 are separated by 128 nucleotides OLJFJH_07325 and OLJFJH_07330 are separated by 12 nucleotides
OLJFJH_07315: OLJFJH_07315 - beta-N-acetylhexosaminidase, at 1,491,089 to 1,493,461
_07315
OLJFJH_07320: OLJFJH_07320 - 2-iminobutanoate/2-iminopropanoate deaminase, at 1,493,553 to 1,493,939
_07320
OLJFJH_07325: OLJFJH_07325 - aspartate carbamoyltransferase regulatory subunit, at 1,494,068 to 1,494,532
_07325
OLJFJH_07330: OLJFJH_07330 - aspartate carbamoyltransferase, at 1,494,545 to 1,495,480
_07330
Position (kb)
1493
1494 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1492.578 kb on + strand, within OLJFJH_07315 at 1492.578 kb on + strand, within OLJFJH_07315 at 1492.579 kb on - strand, within OLJFJH_07315 at 1492.687 kb on - strand, within OLJFJH_07315 at 1492.859 kb on - strand, within OLJFJH_07315 at 1492.862 kb on + strand, within OLJFJH_07315 at 1492.862 kb on + strand, within OLJFJH_07315 at 1492.862 kb on + strand, within OLJFJH_07315 at 1492.863 kb on - strand, within OLJFJH_07315 at 1492.921 kb on + strand, within OLJFJH_07315 at 1492.921 kb on + strand, within OLJFJH_07315 at 1492.921 kb on + strand, within OLJFJH_07315 at 1492.922 kb on - strand, within OLJFJH_07315 at 1492.935 kb on + strand, within OLJFJH_07315 at 1492.935 kb on + strand, within OLJFJH_07315 at 1492.936 kb on - strand, within OLJFJH_07315 at 1492.977 kb on + strand, within OLJFJH_07315 at 1493.217 kb on + strand, within OLJFJH_07315 at 1493.218 kb on - strand, within OLJFJH_07315 at 1493.296 kb on + strand at 1493.297 kb on - strand at 1493.297 kb on - strand at 1493.377 kb on - strand at 1493.377 kb on - strand at 1493.455 kb on + strand at 1493.460 kb on - strand at 1493.460 kb on - strand at 1493.555 kb on - strand at 1493.668 kb on + strand, within OLJFJH_07320 at 1493.769 kb on + strand, within OLJFJH_07320 at 1493.804 kb on + strand, within OLJFJH_07320 at 1493.863 kb on + strand, within OLJFJH_07320 at 1493.864 kb on + strand, within OLJFJH_07320 at 1493.865 kb on - strand, within OLJFJH_07320 at 1494.115 kb on - strand, within OLJFJH_07325 at 1494.267 kb on + strand, within OLJFJH_07325 at 1494.303 kb on + strand, within OLJFJH_07325 at 1494.304 kb on - strand, within OLJFJH_07325 at 1494.472 kb on + strand, within OLJFJH_07325 at 1494.546 kb on + strand at 1494.546 kb on + strand at 1494.547 kb on - strand at 1494.570 kb on - strand at 1494.597 kb on + strand at 1494.598 kb on - strand at 1494.598 kb on - strand at 1494.671 kb on - strand, within OLJFJH_07330 at 1494.697 kb on + strand, within OLJFJH_07330 at 1494.760 kb on - strand, within OLJFJH_07330 at 1494.799 kb on + strand, within OLJFJH_07330 at 1494.801 kb on + strand, within OLJFJH_07330 at 1494.801 kb on + strand, within OLJFJH_07330 at 1494.801 kb on + strand, within OLJFJH_07330 at 1494.801 kb on + strand, within OLJFJH_07330 at 1494.801 kb on + strand, within OLJFJH_07330 at 1494.801 kb on + strand, within OLJFJH_07330 at 1494.802 kb on - strand, within OLJFJH_07330 at 1494.802 kb on - strand, within OLJFJH_07330 at 1494.802 kb on - strand, within OLJFJH_07330 at 1494.809 kb on - strand, within OLJFJH_07330 at 1494.887 kb on - strand, within OLJFJH_07330 at 1494.887 kb on - strand, within OLJFJH_07330 at 1494.887 kb on - strand, within OLJFJH_07330 at 1494.888 kb on + strand, within OLJFJH_07330 at 1494.889 kb on - strand, within OLJFJH_07330 at 1494.889 kb on - strand, within OLJFJH_07330
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-6 remove 1,492,578 + OLJFJH_07315 0.63 -0.2 1,492,578 + OLJFJH_07315 0.63 -0.1 1,492,579 - OLJFJH_07315 0.63 +0.0 1,492,687 - OLJFJH_07315 0.67 +0.5 1,492,859 - OLJFJH_07315 0.75 -0.7 1,492,862 + OLJFJH_07315 0.75 -2.4 1,492,862 + OLJFJH_07315 0.75 +0.3 1,492,862 + OLJFJH_07315 0.75 -0.0 1,492,863 - OLJFJH_07315 0.75 -0.4 1,492,921 + OLJFJH_07315 0.77 +0.9 1,492,921 + OLJFJH_07315 0.77 +0.4 1,492,921 + OLJFJH_07315 0.77 -0.3 1,492,922 - OLJFJH_07315 0.77 -0.1 1,492,935 + OLJFJH_07315 0.78 +0.0 1,492,935 + OLJFJH_07315 0.78 +0.7 1,492,936 - OLJFJH_07315 0.78 +0.0 1,492,977 + OLJFJH_07315 0.80 -1.2 1,493,217 + OLJFJH_07315 0.90 +0.3 1,493,218 - OLJFJH_07315 0.90 -0.2 1,493,296 + +0.1 1,493,297 - -2.7 1,493,297 - +0.6 1,493,377 - -0.1 1,493,377 - +2.1 1,493,455 + +0.3 1,493,460 - -0.2 1,493,460 - +1.3 1,493,555 - +0.4 1,493,668 + OLJFJH_07320 0.30 -1.5 1,493,769 + OLJFJH_07320 0.56 -1.8 1,493,804 + OLJFJH_07320 0.65 -0.8 1,493,863 + OLJFJH_07320 0.80 -1.3 1,493,864 + OLJFJH_07320 0.80 -1.5 1,493,865 - OLJFJH_07320 0.81 +0.0 1,494,115 - OLJFJH_07325 0.10 -1.3 1,494,267 + OLJFJH_07325 0.43 +0.3 1,494,303 + OLJFJH_07325 0.51 +0.2 1,494,304 - OLJFJH_07325 0.51 -0.7 1,494,472 + OLJFJH_07325 0.87 +0.1 1,494,546 + +1.6 1,494,546 + +0.3 1,494,547 - -0.9 1,494,570 - +2.5 1,494,597 + -1.7 1,494,598 - -1.9 1,494,598 - +0.1 1,494,671 - OLJFJH_07330 0.13 -0.5 1,494,697 + OLJFJH_07330 0.16 -1.3 1,494,760 - OLJFJH_07330 0.23 -1.6 1,494,799 + OLJFJH_07330 0.27 -0.7 1,494,801 + OLJFJH_07330 0.27 -1.8 1,494,801 + OLJFJH_07330 0.27 -0.6 1,494,801 + OLJFJH_07330 0.27 -0.6 1,494,801 + OLJFJH_07330 0.27 -0.9 1,494,801 + OLJFJH_07330 0.27 -1.3 1,494,801 + OLJFJH_07330 0.27 -1.0 1,494,802 - OLJFJH_07330 0.27 -2.0 1,494,802 - OLJFJH_07330 0.27 -2.2 1,494,802 - OLJFJH_07330 0.27 -1.4 1,494,809 - OLJFJH_07330 0.28 +0.5 1,494,887 - OLJFJH_07330 0.37 -1.8 1,494,887 - OLJFJH_07330 0.37 -1.6 1,494,887 - OLJFJH_07330 0.37 -1.2 1,494,888 + OLJFJH_07330 0.37 -2.5 1,494,889 - OLJFJH_07330 0.37 -1.2 1,494,889 - OLJFJH_07330 0.37 -1.2
Or see this region's nucleotide sequence