Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_07270 and OLJFJH_07275 are separated by 176 nucleotides OLJFJH_07275 and OLJFJH_07280 are separated by 75 nucleotides
OLJFJH_07270: OLJFJH_07270 - lipoprotein NlpI, at 1,479,701 to 1,480,585
_07270
OLJFJH_07275: OLJFJH_07275 - DEAD/DEAH family ATP-dependent RNA helicase, at 1,480,762 to 1,482,678
_07275
OLJFJH_07280: OLJFJH_07280 - luciferase-like monooxygenase, at 1,482,754 to 1,483,761
_07280
Position (kb)
1480
1481
1482
1483 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1479.775 kb on + strand at 1479.895 kb on - strand, within OLJFJH_07270 at 1479.896 kb on + strand, within OLJFJH_07270 at 1479.914 kb on + strand, within OLJFJH_07270 at 1479.915 kb on - strand, within OLJFJH_07270 at 1479.993 kb on + strand, within OLJFJH_07270 at 1480.011 kb on + strand, within OLJFJH_07270 at 1480.013 kb on + strand, within OLJFJH_07270 at 1480.091 kb on + strand, within OLJFJH_07270 at 1480.138 kb on + strand, within OLJFJH_07270 at 1480.211 kb on + strand, within OLJFJH_07270 at 1480.273 kb on + strand, within OLJFJH_07270 at 1480.273 kb on + strand, within OLJFJH_07270 at 1480.415 kb on + strand, within OLJFJH_07270 at 1480.419 kb on + strand, within OLJFJH_07270 at 1480.419 kb on + strand, within OLJFJH_07270 at 1480.423 kb on + strand, within OLJFJH_07270 at 1480.427 kb on + strand, within OLJFJH_07270 at 1480.427 kb on + strand, within OLJFJH_07270 at 1480.434 kb on + strand, within OLJFJH_07270 at 1480.435 kb on - strand, within OLJFJH_07270 at 1480.584 kb on - strand at 1480.720 kb on + strand at 1480.724 kb on + strand at 1480.725 kb on - strand at 1480.757 kb on - strand at 1480.759 kb on + strand at 1480.837 kb on + strand at 1480.869 kb on + strand at 1480.972 kb on - strand, within OLJFJH_07275 at 1481.716 kb on + strand, within OLJFJH_07275 at 1481.860 kb on - strand, within OLJFJH_07275 at 1482.325 kb on + strand, within OLJFJH_07275 at 1482.364 kb on - strand, within OLJFJH_07275 at 1482.441 kb on + strand, within OLJFJH_07275 at 1482.442 kb on - strand, within OLJFJH_07275 at 1482.677 kb on - strand at 1482.935 kb on + strand, within OLJFJH_07280 at 1482.935 kb on + strand, within OLJFJH_07280 at 1482.936 kb on - strand, within OLJFJH_07280 at 1483.038 kb on + strand, within OLJFJH_07280 at 1483.234 kb on + strand, within OLJFJH_07280 at 1483.234 kb on + strand, within OLJFJH_07280 at 1483.235 kb on - strand, within OLJFJH_07280 at 1483.235 kb on - strand, within OLJFJH_07280 at 1483.267 kb on + strand, within OLJFJH_07280 at 1483.268 kb on - strand, within OLJFJH_07280 at 1483.268 kb on - strand, within OLJFJH_07280 at 1483.268 kb on - strand, within OLJFJH_07280 at 1483.398 kb on + strand, within OLJFJH_07280 at 1483.398 kb on + strand, within OLJFJH_07280 at 1483.398 kb on + strand, within OLJFJH_07280 at 1483.399 kb on - strand, within OLJFJH_07280 at 1483.399 kb on - strand, within OLJFJH_07280 at 1483.399 kb on - strand, within OLJFJH_07280 at 1483.399 kb on - strand, within OLJFJH_07280 at 1483.515 kb on + strand, within OLJFJH_07280 at 1483.515 kb on + strand, within OLJFJH_07280 at 1483.515 kb on + strand, within OLJFJH_07280 at 1483.515 kb on + strand, within OLJFJH_07280 at 1483.516 kb on - strand, within OLJFJH_07280 at 1483.563 kb on - strand, within OLJFJH_07280 at 1483.605 kb on + strand, within OLJFJH_07280 at 1483.605 kb on + strand, within OLJFJH_07280 at 1483.605 kb on + strand, within OLJFJH_07280 at 1483.605 kb on + strand, within OLJFJH_07280 at 1483.606 kb on - strand, within OLJFJH_07280 at 1483.606 kb on - strand, within OLJFJH_07280 at 1483.606 kb on - strand, within OLJFJH_07280 at 1483.606 kb on - strand, within OLJFJH_07280 at 1483.677 kb on + strand at 1483.677 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-6 remove 1,479,775 + +0.7 1,479,895 - OLJFJH_07270 0.22 +0.5 1,479,896 + OLJFJH_07270 0.22 -0.7 1,479,914 + OLJFJH_07270 0.24 -0.6 1,479,915 - OLJFJH_07270 0.24 -2.5 1,479,993 + OLJFJH_07270 0.33 +0.2 1,480,011 + OLJFJH_07270 0.35 -0.8 1,480,013 + OLJFJH_07270 0.35 -1.1 1,480,091 + OLJFJH_07270 0.44 +0.0 1,480,138 + OLJFJH_07270 0.49 -0.5 1,480,211 + OLJFJH_07270 0.58 +1.3 1,480,273 + OLJFJH_07270 0.65 -0.7 1,480,273 + OLJFJH_07270 0.65 -0.3 1,480,415 + OLJFJH_07270 0.81 +1.2 1,480,419 + OLJFJH_07270 0.81 -0.4 1,480,419 + OLJFJH_07270 0.81 -1.0 1,480,423 + OLJFJH_07270 0.82 +0.5 1,480,427 + OLJFJH_07270 0.82 +0.4 1,480,427 + OLJFJH_07270 0.82 +1.1 1,480,434 + OLJFJH_07270 0.83 +0.7 1,480,435 - OLJFJH_07270 0.83 -0.5 1,480,584 - -0.1 1,480,720 + -1.5 1,480,724 + -0.9 1,480,725 - -1.0 1,480,757 - -0.5 1,480,759 + -1.1 1,480,837 + -2.4 1,480,869 + -0.1 1,480,972 - OLJFJH_07275 0.11 -0.1 1,481,716 + OLJFJH_07275 0.50 -1.0 1,481,860 - OLJFJH_07275 0.57 +0.3 1,482,325 + OLJFJH_07275 0.82 -0.4 1,482,364 - OLJFJH_07275 0.84 -0.5 1,482,441 + OLJFJH_07275 0.88 -2.7 1,482,442 - OLJFJH_07275 0.88 -2.0 1,482,677 - -0.7 1,482,935 + OLJFJH_07280 0.18 -0.3 1,482,935 + OLJFJH_07280 0.18 -0.1 1,482,936 - OLJFJH_07280 0.18 -0.2 1,483,038 + OLJFJH_07280 0.28 +0.8 1,483,234 + OLJFJH_07280 0.48 +0.8 1,483,234 + OLJFJH_07280 0.48 +0.2 1,483,235 - OLJFJH_07280 0.48 -0.1 1,483,235 - OLJFJH_07280 0.48 +0.5 1,483,267 + OLJFJH_07280 0.51 +1.1 1,483,268 - OLJFJH_07280 0.51 -0.3 1,483,268 - OLJFJH_07280 0.51 -0.4 1,483,268 - OLJFJH_07280 0.51 +0.1 1,483,398 + OLJFJH_07280 0.64 +2.3 1,483,398 + OLJFJH_07280 0.64 +0.3 1,483,398 + OLJFJH_07280 0.64 +1.2 1,483,399 - OLJFJH_07280 0.64 +0.2 1,483,399 - OLJFJH_07280 0.64 +0.6 1,483,399 - OLJFJH_07280 0.64 +0.2 1,483,399 - OLJFJH_07280 0.64 +1.5 1,483,515 + OLJFJH_07280 0.75 +1.0 1,483,515 + OLJFJH_07280 0.75 +1.4 1,483,515 + OLJFJH_07280 0.75 +0.4 1,483,515 + OLJFJH_07280 0.75 +1.1 1,483,516 - OLJFJH_07280 0.76 -0.8 1,483,563 - OLJFJH_07280 0.80 +0.5 1,483,605 + OLJFJH_07280 0.84 +0.7 1,483,605 + OLJFJH_07280 0.84 +1.6 1,483,605 + OLJFJH_07280 0.84 +2.4 1,483,605 + OLJFJH_07280 0.84 +1.2 1,483,606 - OLJFJH_07280 0.85 -0.6 1,483,606 - OLJFJH_07280 0.85 +1.0 1,483,606 - OLJFJH_07280 0.85 +0.1 1,483,606 - OLJFJH_07280 0.85 -0.3 1,483,677 + +0.4 1,483,677 + +1.7
Or see this region's nucleotide sequence