Strain Fitness in Erwinia amylovora T8 around OLJFJH_06230

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
1,257,900	+				-1.2
1,257,900	+				-1.4
1,257,901	-				-2.1
1,257,923	+				-1.4
1,257,924	-				-1.8
1,257,975	+		OLJFJH_06225	0.10	+0.6
1,257,976	-		OLJFJH_06225	0.10	-2.1
1,258,047	+		OLJFJH_06225	0.18	-1.6
1,258,047	+		OLJFJH_06225	0.18	-2.1
1,258,047	+		OLJFJH_06225	0.18	-3.8
1,258,047	+		OLJFJH_06225	0.18	-1.4
1,258,047	+		OLJFJH_06225	0.18	-1.6
1,258,047	+		OLJFJH_06225	0.18	-0.4
1,258,047	+		OLJFJH_06225	0.18	-2.9
1,258,048	-		OLJFJH_06225	0.18	-2.1
1,258,048	-		OLJFJH_06225	0.18	-1.1
1,258,048	-		OLJFJH_06225	0.18	-1.6
1,258,048	-		OLJFJH_06225	0.18	-2.5
1,258,162	+		OLJFJH_06225	0.30	-0.7
1,258,162	+		OLJFJH_06225	0.30	-1.9
1,258,163	-		OLJFJH_06225	0.31	-1.7
1,258,164	+		OLJFJH_06225	0.31	-1.8
1,258,178	+		OLJFJH_06225	0.32	-1.7
1,258,233	+		OLJFJH_06225	0.38	-2.2
1,258,369	+		OLJFJH_06225	0.53	-2.0
1,258,369	+		OLJFJH_06225	0.53	-3.5
1,258,369	+		OLJFJH_06225	0.53	-1.9
1,258,369	+		OLJFJH_06225	0.53	-2.2
1,258,370	-		OLJFJH_06225	0.53	-2.0
1,258,370	-		OLJFJH_06225	0.53	+0.5
1,258,447	+		OLJFJH_06225	0.61	-1.4
1,258,447	+		OLJFJH_06225	0.61	-2.2
1,258,447	+		OLJFJH_06225	0.61	-1.8
1,258,448	-		OLJFJH_06225	0.61	-2.7
1,258,449	+		OLJFJH_06225	0.61	-1.1
1,258,449	+		OLJFJH_06225	0.61	-1.5
1,258,449	+		OLJFJH_06225	0.61	-1.3
1,258,449	+		OLJFJH_06225	0.61	-2.3
1,258,450	-		OLJFJH_06225	0.61	-2.6
1,258,450	-		OLJFJH_06225	0.61	-2.3
1,258,450	-		OLJFJH_06225	0.61	-2.8
1,258,450	-		OLJFJH_06225	0.61	-2.6
1,258,515	+		OLJFJH_06225	0.69	-1.2
1,258,618	+		OLJFJH_06225	0.80	-1.9
1,258,639	-		OLJFJH_06225	0.82	-0.9
1,258,773	+				-1.7
1,258,774	-				-3.1
1,258,774	-				-4.6
1,258,865	+				-3.1
1,258,865	+				-1.2
1,258,865	+				-1.3
1,258,866	-				-0.7
1,258,866	-				-2.7
1,258,866	-				-0.8
1,258,877	+				-1.9
1,258,877	+				-2.6
1,258,877	+				-1.3
1,258,878	-				-1.1
1,258,882	-				-3.2
1,259,001	-				+0.6
1,259,145	+		OLJFJH_06230	0.15	-0.6
1,259,146	-		OLJFJH_06230	0.15	-1.1
1,259,187	+		OLJFJH_06230	0.17	-2.1
1,259,187	+		OLJFJH_06230	0.17	-0.9
1,259,187	+		OLJFJH_06230	0.17	-2.4
1,259,187	+		OLJFJH_06230	0.17	-2.0
1,259,188	-		OLJFJH_06230	0.17	-2.2
1,259,188	-		OLJFJH_06230	0.17	-0.1
1,259,188	-		OLJFJH_06230	0.17	-2.1
1,259,188	-		OLJFJH_06230	0.17	-1.9
1,259,188	-		OLJFJH_06230	0.17	-1.8
1,259,225	+		OLJFJH_06230	0.19	-2.1
1,259,225	+		OLJFJH_06230	0.19	-0.4
1,259,571	-		OLJFJH_06230	0.38	-2.3
1,259,610	+		OLJFJH_06230	0.40	-2.4
1,259,706	-		OLJFJH_06230	0.45	-3.3
1,259,706	-		OLJFJH_06230	0.45	-2.8
1,259,711	+		OLJFJH_06230	0.45	-2.4
1,259,712	-		OLJFJH_06230	0.45	-2.2
1,259,712	-		OLJFJH_06230	0.45	-2.5
1,259,832	+		OLJFJH_06230	0.52	-1.1
1,259,833	-		OLJFJH_06230	0.52	-1.4
1,259,833	-		OLJFJH_06230	0.52	-1.3
1,259,833	-		OLJFJH_06230	0.52	-2.2
1,259,833	-		OLJFJH_06230	0.52	-1.7
1,259,834	-		OLJFJH_06230	0.52	-1.8
1,259,838	-		OLJFJH_06230	0.52	-1.1
1,259,838	-		OLJFJH_06230	0.52	-1.9
1,259,912	+		OLJFJH_06230	0.56	-0.2
1,259,913	-		OLJFJH_06230	0.56	-2.4
1,259,917	+		OLJFJH_06230	0.56	-2.0
1,259,917	+		OLJFJH_06230	0.56	-2.0
1,259,917	+		OLJFJH_06230	0.56	-1.1
1,259,918	-		OLJFJH_06230	0.57	-1.8
1,259,921	+		OLJFJH_06230	0.57	-1.8
1,259,921	+		OLJFJH_06230	0.57	-0.6
1,259,922	-		OLJFJH_06230	0.57	-2.2
1,259,970	-		OLJFJH_06230	0.59	-1.5
1,259,970	-		OLJFJH_06230	0.59	-1.8
1,260,147	+		OLJFJH_06230	0.69	-2.3
1,260,212	-		OLJFJH_06230	0.72	-1.0
1,260,234	+		OLJFJH_06230	0.74	-1.8
1,260,234	+		OLJFJH_06230	0.74	-0.4
1,260,235	-		OLJFJH_06230	0.74	-2.2
1,260,364	-		OLJFJH_06230	0.81	-2.2
1,260,364	-		OLJFJH_06230	0.81	-1.7
1,260,364	-		OLJFJH_06230	0.81	-1.0
1,260,480	-		OLJFJH_06230	0.87	+0.1
1,260,609	+				-1.6
1,260,657	+				-1.8
1,260,707	+				-0.6
1,260,707	+				-0.6
1,260,721	-				+0.2
1,260,773	+				-0.7
1,260,773	+				+0.1
1,260,774	-				+0.4
1,260,802	-				-0.2
1,260,803	+				-0.0
1,260,803	+				+0.0
1,260,803	+				-0.1
1,260,803	+				-1.3
1,260,803	+				-0.3
1,260,804	-				-1.1
1,260,804	-				+0.6
1,260,804	-				+0.6
1,260,873	+				+1.2
1,260,878	-				-0.2
1,261,178	+		OLJFJH_06235	0.29	-0.9
1,261,179	-		OLJFJH_06235	0.29	-0.8
1,261,179	-		OLJFJH_06235	0.29	+0.9
1,261,180	+		OLJFJH_06235	0.29	+0.1
1,261,180	+		OLJFJH_06235	0.29	-0.8
1,261,181	-		OLJFJH_06235	0.29	-0.6
1,261,181	-		OLJFJH_06235	0.29	+0.0
1,261,181	-		OLJFJH_06235	0.29	+1.5
1,261,181	-		OLJFJH_06235	0.29	+0.4
1,261,248	+		OLJFJH_06235	0.34	-1.1
1,261,623	-		OLJFJH_06235	0.58	-0.6