Strain Fitness in Erwinia amylovora T8 around OLJFJH_05955

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
1,199,039	-		OLJFJH_05950	0.16	+0.7
1,199,053	-		OLJFJH_05950	0.18	-0.8
1,199,056	+		OLJFJH_05950	0.18	-0.1
1,199,056	+		OLJFJH_05950	0.18	-1.2
1,199,152	+		OLJFJH_05950	0.29	-0.2
1,199,152	+		OLJFJH_05950	0.29	+0.0
1,199,152	+		OLJFJH_05950	0.29	+0.1
1,199,152	+		OLJFJH_05950	0.29	+0.4
1,199,153	-		OLJFJH_05950	0.29	+0.3
1,199,153	-		OLJFJH_05950	0.29	+1.1
1,199,153	-		OLJFJH_05950	0.29	-1.2
1,199,153	-		OLJFJH_05950	0.29	+2.2
1,199,158	+		OLJFJH_05950	0.29	-0.2
1,199,159	-		OLJFJH_05950	0.30	-0.3
1,199,159	-		OLJFJH_05950	0.30	+0.1
1,199,159	-		OLJFJH_05950	0.30	+0.6
1,199,197	-		OLJFJH_05950	0.34	-0.0
1,199,252	-		OLJFJH_05950	0.40	-0.2
1,199,273	-		OLJFJH_05950	0.42	+1.5
1,199,314	+		OLJFJH_05950	0.47	-0.1
1,199,442	+		OLJFJH_05950	0.61	+1.9
1,199,443	-		OLJFJH_05950	0.61	-0.5
1,199,463	+		OLJFJH_05950	0.63	+0.0
1,199,467	+		OLJFJH_05950	0.64	+0.9
1,199,475	+		OLJFJH_05950	0.65	-1.0
1,199,476	-		OLJFJH_05950	0.65	+0.4
1,199,479	+		OLJFJH_05950	0.65	-0.1
1,199,479	+		OLJFJH_05950	0.65	-0.3
1,199,487	-		OLJFJH_05950	0.66	-0.9
1,199,574	+		OLJFJH_05950	0.76	+0.3
1,199,574	+		OLJFJH_05950	0.76	+1.5
1,199,574	+		OLJFJH_05950	0.76	-0.5
1,199,575	-		OLJFJH_05950	0.76	-0.5
1,199,575	-		OLJFJH_05950	0.76	-2.2
1,199,575	-		OLJFJH_05950	0.76	+0.3
1,199,590	+		OLJFJH_05950	0.77	-0.5
1,199,590	+		OLJFJH_05950	0.77	-1.6
1,199,624	-		OLJFJH_05950	0.81	-0.9
1,199,661	+		OLJFJH_05950	0.85	-0.2
1,199,662	-		OLJFJH_05950	0.85	+0.6
1,199,710	+				-0.1
1,199,711	-				-0.3
1,199,795	+				+0.1
1,199,796	-				-0.1
1,199,903	+				+0.7
1,199,903	+				+0.6
1,199,904	-				-0.8
1,199,904	-				-0.7
1,199,904	-				-0.3
1,199,904	-				-1.1
1,199,904	-				-0.6
1,199,904	-				+0.6
1,199,904	-				-0.7
1,200,019	+				-2.6
1,200,123	+		OLJFJH_05955	0.13	-1.6
1,200,135	+		OLJFJH_05955	0.14	-1.5
1,200,135	+		OLJFJH_05955	0.14	-1.3
1,200,135	+		OLJFJH_05955	0.14	-1.4
1,200,136	-		OLJFJH_05955	0.14	+0.9
1,200,283	+		OLJFJH_05955	0.29	-0.9
1,200,295	+		OLJFJH_05955	0.31	+0.1
1,200,318	+		OLJFJH_05955	0.33	-1.9
1,200,318	+		OLJFJH_05955	0.33	-1.5
1,200,318	+		OLJFJH_05955	0.33	-0.5
1,200,318	+		OLJFJH_05955	0.33	-0.3
1,200,318	+		OLJFJH_05955	0.33	-1.3
1,200,319	-		OLJFJH_05955	0.33	-0.5
1,200,319	-		OLJFJH_05955	0.33	-2.0
1,200,319	-		OLJFJH_05955	0.33	-0.8
1,200,319	-		OLJFJH_05955	0.33	-0.5
1,200,319	-		OLJFJH_05955	0.33	-2.1
1,200,319	-		OLJFJH_05955	0.33	-0.9
1,200,320	+		OLJFJH_05955	0.33	-1.0
1,200,320	+		OLJFJH_05955	0.33	-1.2
1,200,320	+		OLJFJH_05955	0.33	+0.9
1,200,321	-		OLJFJH_05955	0.33	-0.7
1,200,321	-		OLJFJH_05955	0.33	+0.9
1,200,321	-		OLJFJH_05955	0.33	+0.3
1,200,321	-		OLJFJH_05955	0.33	-0.8
1,200,321	-		OLJFJH_05955	0.33	-0.5
1,200,359	+		OLJFJH_05955	0.37	-2.0
1,200,359	+		OLJFJH_05955	0.37	-0.4
1,200,360	-		OLJFJH_05955	0.37	-0.7
1,200,377	+		OLJFJH_05955	0.39	-2.1
1,200,468	-		OLJFJH_05955	0.49	-2.7
1,200,488	+		OLJFJH_05955	0.51	-1.4
1,200,588	+		OLJFJH_05955	0.61	-2.5
1,200,671	+		OLJFJH_05955	0.70	-1.5
1,200,671	+		OLJFJH_05955	0.70	-1.9
1,200,671	+		OLJFJH_05955	0.70	-2.5
1,200,671	+		OLJFJH_05955	0.70	-2.0
1,200,671	+		OLJFJH_05955	0.70	-0.0
1,200,671	+		OLJFJH_05955	0.70	-1.0
1,200,672	-		OLJFJH_05955	0.70	-0.9
1,200,672	-		OLJFJH_05955	0.70	-1.3
1,200,672	-		OLJFJH_05955	0.70	-0.4
1,200,672	-		OLJFJH_05955	0.70	-1.0
1,200,699	+		OLJFJH_05955	0.73	-1.5
1,200,700	-		OLJFJH_05955	0.73	-0.7
1,200,702	-		OLJFJH_05955	0.73	-1.5
1,200,749	+		OLJFJH_05955	0.78	-2.6
1,200,777	+		OLJFJH_05955	0.81	-1.4
1,200,777	+		OLJFJH_05955	0.81	-0.8
1,200,785	+		OLJFJH_05955	0.82	-2.2
1,200,923	+				-0.3
1,200,924	-				-2.0
1,200,955	+				+0.5
1,200,957	+				+0.1
1,200,994	+				-0.1
1,200,997	+				+0.0
1,200,998	-				+1.6
1,201,084	+				+0.3
1,201,084	+				-0.2
1,201,111	+				+0.4
1,201,111	+				+0.0
1,201,112	-				+0.8
1,201,129	+				-0.2
1,201,177	-				+0.4
1,201,190	+				-0.2
1,201,191	-				-1.2
1,201,191	-				+0.1
1,201,191	-				-0.3
1,201,191	-				-0.7
1,201,191	-				+1.2
1,201,220	+		OLJFJH_05960	0.12	+0.5
1,201,220	+		OLJFJH_05960	0.12	+0.3
1,201,221	-		OLJFJH_05960	0.12	+0.0
1,201,244	+		OLJFJH_05960	0.14	+0.5
1,201,244	+		OLJFJH_05960	0.14	+0.2
1,201,244	+		OLJFJH_05960	0.14	+0.3
1,201,245	-		OLJFJH_05960	0.14	-0.4
1,201,245	-		OLJFJH_05960	0.14	+0.3
1,201,245	-		OLJFJH_05960	0.14	+0.7
1,201,246	+		OLJFJH_05960	0.14	-0.1
1,201,246	+		OLJFJH_05960	0.14	+0.2
1,201,246	+		OLJFJH_05960	0.14	-1.4
1,201,321	+		OLJFJH_05960	0.22	+0.5
1,201,321	+		OLJFJH_05960	0.22	-0.8
1,201,322	-		OLJFJH_05960	0.22	-0.8
1,201,328	-		OLJFJH_05960	0.22	+0.2
1,201,440	-		OLJFJH_05960	0.34	-0.3
1,201,440	-		OLJFJH_05960	0.34	+0.8
1,201,440	-		OLJFJH_05960	0.34	-0.9
1,201,440	-		OLJFJH_05960	0.34	+0.4
1,201,571	+		OLJFJH_05960	0.47	-0.5
1,201,571	+		OLJFJH_05960	0.47	-0.2
1,201,634	+		OLJFJH_05960	0.53	-0.5
1,201,634	+		OLJFJH_05960	0.53	+0.6
1,201,665	+		OLJFJH_05960	0.56	-0.6
1,201,665	+		OLJFJH_05960	0.56	-0.5
1,201,666	-		OLJFJH_05960	0.57	-0.4
1,201,666	-		OLJFJH_05960	0.57	-0.1
1,201,765	+		OLJFJH_05960	0.67	-1.4
1,201,766	-		OLJFJH_05960	0.67	-0.5
1,201,766	-		OLJFJH_05960	0.67	-0.3
1,201,870	+		OLJFJH_05960	0.77	-0.2
1,201,887	-		OLJFJH_05960	0.79	-1.0
1,201,896	-		OLJFJH_05960	0.80	+1.2
1,201,896	-		OLJFJH_05960	0.80	-0.2
1,201,896	-		OLJFJH_05960	0.80	-0.6
1,201,902	-		OLJFJH_05960	0.80	+0.1