Strain Fitness in Erwinia amylovora T8 around OLJFJH_05850

Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
1,180,189	+		OLJFJH_05845	0.37	+0.9
1,180,189	+		OLJFJH_05845	0.37	+0.9
1,180,190	-		OLJFJH_05845	0.37	-0.8
1,180,190	-		OLJFJH_05845	0.37	-0.7
1,180,190	-		OLJFJH_05845	0.37	+0.0
1,180,190	-		OLJFJH_05845	0.37	+0.1
1,180,190	-		OLJFJH_05845	0.37	-0.6
1,180,190	-		OLJFJH_05845	0.37	-1.0
1,180,190	-		OLJFJH_05845	0.37	+0.9
1,180,190	-		OLJFJH_05845	0.37	+1.0
1,180,218	-		OLJFJH_05845	0.39	+0.2
1,180,250	-		OLJFJH_05845	0.42	-1.2
1,180,274	+		OLJFJH_05845	0.45	+0.3
1,180,275	-		OLJFJH_05845	0.45	-0.7
1,180,275	-		OLJFJH_05845	0.45	-0.7
1,180,277	+		OLJFJH_05845	0.45	-1.0
1,180,278	-		OLJFJH_05845	0.45	-0.8
1,180,284	+		OLJFJH_05845	0.46	-0.7
1,180,285	-		OLJFJH_05845	0.46	-1.0
1,180,285	-		OLJFJH_05845	0.46	-0.7
1,180,285	-		OLJFJH_05845	0.46	-0.5
1,180,285	-		OLJFJH_05845	0.46	+0.3
1,180,339	-		OLJFJH_05845	0.51	-0.4
1,180,417	+		OLJFJH_05845	0.58	-0.1
1,180,418	-		OLJFJH_05845	0.58	-1.1
1,180,419	-		OLJFJH_05845	0.58	-1.1
1,180,576	-		OLJFJH_05845	0.73	+0.1
1,180,665	+		OLJFJH_05845	0.81	+2.6
1,180,666	-		OLJFJH_05845	0.81	-1.6
1,180,717	-		OLJFJH_05845	0.86	+0.9
1,180,780	+				-0.1
1,180,780	+				-1.3
1,180,780	+				-0.6
1,180,781	-				-1.5
1,180,784	+				-1.6
1,180,784	+				+0.4
1,180,785	-				+0.1
1,180,785	-				-0.6
1,180,785	-				+1.1
1,180,870	+				-0.1
1,180,870	+				-1.0
1,180,871	-				-0.3
1,180,871	-				-1.0
1,180,871	-				+1.3
1,180,985	+				+0.1
1,180,986	-				+1.6
1,180,990	-				+0.2
1,180,990	-				-1.1
1,180,994	+				+0.5
1,180,995	-				-1.2
1,181,005	+				+0.3
1,181,005	+				+0.4
1,181,005	+				-0.3
1,181,006	-				+1.3
1,181,006	-				+1.2
1,181,034	-				-1.5
1,181,046	-				-1.1
1,181,152	-		OLJFJH_05850	0.13	-2.3
1,181,152	-		OLJFJH_05850	0.13	-1.2
1,181,152	-		OLJFJH_05850	0.13	-0.6
1,181,159	+		OLJFJH_05850	0.14	-2.8
1,181,182	-		OLJFJH_05850	0.16	-1.3
1,181,205	+		OLJFJH_05850	0.18	-1.1
1,181,205	+		OLJFJH_05850	0.18	+0.1
1,181,205	+		OLJFJH_05850	0.18	+0.8
1,181,251	+		OLJFJH_05850	0.23	-1.5
1,181,251	+		OLJFJH_05850	0.23	-0.1
1,181,251	+		OLJFJH_05850	0.23	-1.3
1,181,251	+		OLJFJH_05850	0.23	-2.6
1,181,251	+		OLJFJH_05850	0.23	-0.1
1,181,252	-		OLJFJH_05850	0.23	-1.8
1,181,252	-		OLJFJH_05850	0.23	-0.4
1,181,252	-		OLJFJH_05850	0.23	-0.2
1,181,255	+		OLJFJH_05850	0.24	-2.1
1,181,255	+		OLJFJH_05850	0.24	-2.1
1,181,256	-		OLJFJH_05850	0.24	-1.5
1,181,256	-		OLJFJH_05850	0.24	+0.5
1,181,289	+		OLJFJH_05850	0.27	-1.2
1,181,289	+		OLJFJH_05850	0.27	-0.6
1,181,319	-		OLJFJH_05850	0.30	-0.1
1,181,348	+		OLJFJH_05850	0.33	-0.7
1,181,349	-		OLJFJH_05850	0.34	-1.1
1,181,370	+		OLJFJH_05850	0.36	-1.2
1,181,370	+		OLJFJH_05850	0.36	-1.6
1,181,370	+		OLJFJH_05850	0.36	-0.5
1,181,371	-		OLJFJH_05850	0.36	-1.4
1,181,371	-		OLJFJH_05850	0.36	+1.9
1,181,371	-		OLJFJH_05850	0.36	-1.1
1,181,394	-		OLJFJH_05850	0.38	-1.0
1,181,451	+		OLJFJH_05850	0.44	+1.9
1,181,452	-		OLJFJH_05850	0.44	-0.6
1,181,510	-		OLJFJH_05850	0.50	-1.6
1,181,559	+		OLJFJH_05850	0.55	-0.9
1,181,589	-		OLJFJH_05850	0.59	-1.5
1,181,655	+		OLJFJH_05850	0.66	-1.1
1,181,655	+		OLJFJH_05850	0.66	+0.1
1,181,656	-		OLJFJH_05850	0.66	-0.6
1,181,684	+		OLJFJH_05850	0.69	-0.7
1,181,694	+		OLJFJH_05850	0.70	-1.1
1,181,711	+		OLJFJH_05850	0.71	-1.3
1,181,811	+		OLJFJH_05850	0.82	-3.1
1,181,812	-		OLJFJH_05850	0.82	-1.3
1,181,822	+		OLJFJH_05850	0.83	-0.7
1,181,867	+		OLJFJH_05850	0.88	-0.2
1,181,895	+				-0.7
1,181,895	+				-2.3
1,181,895	+				-0.5
1,181,898	-				-0.7
1,181,932	+				-0.2
1,181,932	+				-0.6
1,181,932	+				-0.3
1,181,933	-				-0.5
1,182,109	+		OLJFJH_05855	0.11	+0.5
1,182,109	+		OLJFJH_05855	0.11	+1.2
1,182,164	+		OLJFJH_05855	0.16	-0.1
1,182,189	+		OLJFJH_05855	0.18	+0.2
1,182,244	+		OLJFJH_05855	0.23	+0.0
1,182,244	+		OLJFJH_05855	0.23	+1.0
1,182,245	-		OLJFJH_05855	0.23	-0.1
1,182,245	-		OLJFJH_05855	0.23	+0.0
1,182,285	+		OLJFJH_05855	0.27	+0.9
1,182,333	+		OLJFJH_05855	0.31	-0.7
1,182,391	+		OLJFJH_05855	0.37	+0.1
1,182,391	+		OLJFJH_05855	0.37	+0.2
1,182,399	-		OLJFJH_05855	0.37	+0.1
1,182,409	+		OLJFJH_05855	0.38	-0.9
1,182,409	+		OLJFJH_05855	0.38	-0.3
1,182,410	-		OLJFJH_05855	0.38	+0.6
1,182,410	-		OLJFJH_05855	0.38	+0.3
1,182,410	-		OLJFJH_05855	0.38	-1.5
1,182,410	-		OLJFJH_05855	0.38	+0.1
1,182,451	+		OLJFJH_05855	0.42	+0.4
1,182,452	-		OLJFJH_05855	0.42	+0.0
1,182,466	+		OLJFJH_05855	0.43	-1.0
1,182,466	+		OLJFJH_05855	0.43	-0.4
1,182,497	+		OLJFJH_05855	0.46	-0.1
1,182,535	-		OLJFJH_05855	0.50	-2.0
1,182,643	+		OLJFJH_05855	0.60	+0.9
1,182,724	-		OLJFJH_05855	0.67	-0.2
1,182,789	+		OLJFJH_05855	0.73	-0.1
1,182,789	+		OLJFJH_05855	0.73	-0.0
1,182,800	+		OLJFJH_05855	0.74	-0.7
1,182,800	+		OLJFJH_05855	0.74	+0.1
1,182,800	+		OLJFJH_05855	0.74	-1.0
1,182,800	+		OLJFJH_05855	0.74	+0.5
1,182,800	+		OLJFJH_05855	0.74	+0.4
1,182,801	-		OLJFJH_05855	0.74	-0.9
1,182,801	-		OLJFJH_05855	0.74	-0.3
1,182,837	-		OLJFJH_05855	0.77	+0.0
1,182,961	-		OLJFJH_05855	0.88	+1.5
1,182,961	-		OLJFJH_05855	0.88	-0.7
1,182,963	+		OLJFJH_05855	0.88	+0.1
1,182,964	-		OLJFJH_05855	0.89	-0.0