Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01830 and OLJFJH_01835 are separated by 118 nucleotides OLJFJH_01835 and OLJFJH_01840 are separated by 125 nucleotides OLJFJH_01840 and OLJFJH_01845 are separated by 137 nucleotides
OLJFJH_01830: OLJFJH_01830 - FHA domain-containing protein, at 323,419 to 325,260
_01830
OLJFJH_01835: OLJFJH_01835 - T6SS amidase immunity protein Tai4 family protein, at 325,379 to 325,747
_01835
OLJFJH_01840: OLJFJH_01840 - type VI secretion protein, at 325,873 to 326,280
_01840
OLJFJH_01845: OLJFJH_01845 - type VI secretion protein, at 326,418 to 326,786
_01845
Position (kb) 325
326 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 324.603 kb on + strand, within OLJFJH_01830 at 324.603 kb on + strand, within OLJFJH_01830 at 324.604 kb on - strand, within OLJFJH_01830 at 324.708 kb on + strand, within OLJFJH_01830 at 324.709 kb on - strand, within OLJFJH_01830 at 324.709 kb on - strand, within OLJFJH_01830 at 324.709 kb on - strand, within OLJFJH_01830 at 325.003 kb on + strand, within OLJFJH_01830 at 325.003 kb on + strand, within OLJFJH_01830 at 325.035 kb on + strand, within OLJFJH_01830 at 325.035 kb on + strand, within OLJFJH_01830 at 325.102 kb on - strand at 325.110 kb on + strand at 325.111 kb on - strand at 325.162 kb on - strand at 325.245 kb on + strand at 325.245 kb on + strand at 325.245 kb on + strand at 325.246 kb on - strand at 325.246 kb on - strand at 325.314 kb on + strand at 325.381 kb on - strand at 325.381 kb on - strand at 325.438 kb on - strand, within OLJFJH_01835 at 325.487 kb on - strand, within OLJFJH_01835 at 325.487 kb on - strand, within OLJFJH_01835 at 325.487 kb on - strand, within OLJFJH_01835 at 325.489 kb on - strand, within OLJFJH_01835 at 325.548 kb on + strand, within OLJFJH_01835 at 325.567 kb on - strand, within OLJFJH_01835 at 325.736 kb on + strand at 325.828 kb on - strand at 326.167 kb on - strand, within OLJFJH_01840 at 326.293 kb on - strand at 326.328 kb on + strand at 326.363 kb on + strand at 326.709 kb on - strand, within OLJFJH_01845
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-6 remove 324,603 + OLJFJH_01830 0.64 +3.4 324,603 + OLJFJH_01830 0.64 +3.4 324,604 - OLJFJH_01830 0.64 +1.5 324,708 + OLJFJH_01830 0.70 +1.2 324,709 - OLJFJH_01830 0.70 +1.1 324,709 - OLJFJH_01830 0.70 +1.8 324,709 - OLJFJH_01830 0.70 +1.2 325,003 + OLJFJH_01830 0.86 +0.5 325,003 + OLJFJH_01830 0.86 +0.1 325,035 + OLJFJH_01830 0.88 +1.1 325,035 + OLJFJH_01830 0.88 +2.9 325,102 - +1.6 325,110 + +2.4 325,111 - +1.1 325,162 - -0.9 325,245 + +2.2 325,245 + +1.5 325,245 + +1.3 325,246 - +1.4 325,246 - +1.5 325,314 + +1.7 325,381 - -1.1 325,381 - -1.2 325,438 - OLJFJH_01835 0.16 -1.9 325,487 - OLJFJH_01835 0.29 -1.9 325,487 - OLJFJH_01835 0.29 -0.8 325,487 - OLJFJH_01835 0.29 -2.1 325,489 - OLJFJH_01835 0.30 -1.1 325,548 + OLJFJH_01835 0.46 +0.9 325,567 - OLJFJH_01835 0.51 -1.1 325,736 + +2.6 325,828 - -2.1 326,167 - OLJFJH_01840 0.72 +1.0 326,293 - -0.0 326,328 + +1.6 326,363 + +0.9 326,709 - OLJFJH_01845 0.79 -0.8
Or see this region's nucleotide sequence