Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01820 and OLJFJH_01825 are separated by 18 nucleotides OLJFJH_01825 and OLJFJH_01830 overlap by 4 nucleotides
OLJFJH_01820: OLJFJH_01820 - hypothetical protein, at 321,602 to 322,609
_01820
OLJFJH_01825: OLJFJH_01825 - serine/threonine phosphatase, at 322,628 to 323,422
_01825
OLJFJH_01830: OLJFJH_01830 - FHA domain-containing protein, at 323,419 to 325,260
_01830
Position (kb) 322
323
324 Strain fitness (log2 ratio) -2
-1
0
1
2 at 321.641 kb on + strand at 321.693 kb on - strand at 321.825 kb on + strand, within OLJFJH_01820 at 322.098 kb on + strand, within OLJFJH_01820 at 322.346 kb on - strand, within OLJFJH_01820 at 322.401 kb on + strand, within OLJFJH_01820 at 322.402 kb on - strand, within OLJFJH_01820 at 322.402 kb on - strand, within OLJFJH_01820 at 322.402 kb on - strand, within OLJFJH_01820 at 322.487 kb on - strand, within OLJFJH_01820 at 322.520 kb on - strand at 322.520 kb on - strand at 322.602 kb on + strand at 322.602 kb on + strand at 322.603 kb on - strand at 322.609 kb on + strand at 322.610 kb on - strand at 322.610 kb on - strand at 322.610 kb on - strand at 322.626 kb on + strand at 322.627 kb on - strand at 322.630 kb on - strand at 322.645 kb on + strand at 322.722 kb on + strand, within OLJFJH_01825 at 322.722 kb on + strand, within OLJFJH_01825 at 322.722 kb on + strand, within OLJFJH_01825 at 322.722 kb on + strand, within OLJFJH_01825 at 322.722 kb on + strand, within OLJFJH_01825 at 322.722 kb on + strand, within OLJFJH_01825 at 322.801 kb on + strand, within OLJFJH_01825 at 322.810 kb on + strand, within OLJFJH_01825 at 322.811 kb on - strand, within OLJFJH_01825 at 322.811 kb on - strand, within OLJFJH_01825 at 322.811 kb on - strand, within OLJFJH_01825 at 322.828 kb on + strand, within OLJFJH_01825 at 322.828 kb on + strand, within OLJFJH_01825 at 322.829 kb on - strand, within OLJFJH_01825 at 322.893 kb on - strand, within OLJFJH_01825 at 322.912 kb on - strand, within OLJFJH_01825 at 322.912 kb on - strand, within OLJFJH_01825 at 323.037 kb on + strand, within OLJFJH_01825 at 323.038 kb on - strand, within OLJFJH_01825 at 323.044 kb on - strand, within OLJFJH_01825 at 323.044 kb on - strand, within OLJFJH_01825 at 323.061 kb on + strand, within OLJFJH_01825 at 323.062 kb on - strand, within OLJFJH_01825 at 323.143 kb on + strand, within OLJFJH_01825 at 323.205 kb on + strand, within OLJFJH_01825 at 323.374 kb on + strand at 323.413 kb on + strand at 323.416 kb on + strand at 323.453 kb on + strand at 323.474 kb on + strand at 323.475 kb on - strand at 323.475 kb on - strand at 323.544 kb on - strand at 323.664 kb on + strand, within OLJFJH_01830 at 323.665 kb on - strand, within OLJFJH_01830 at 323.665 kb on - strand, within OLJFJH_01830 at 323.665 kb on - strand, within OLJFJH_01830 at 323.665 kb on - strand, within OLJFJH_01830 at 323.794 kb on + strand, within OLJFJH_01830 at 323.866 kb on + strand, within OLJFJH_01830 at 323.867 kb on - strand, within OLJFJH_01830 at 323.867 kb on - strand, within OLJFJH_01830 at 323.925 kb on + strand, within OLJFJH_01830 at 323.925 kb on + strand, within OLJFJH_01830 at 323.925 kb on + strand, within OLJFJH_01830 at 323.925 kb on + strand, within OLJFJH_01830 at 323.926 kb on - strand, within OLJFJH_01830 at 323.926 kb on - strand, within OLJFJH_01830 at 323.926 kb on - strand, within OLJFJH_01830 at 323.977 kb on - strand, within OLJFJH_01830 at 324.124 kb on - strand, within OLJFJH_01830
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-6 remove 321,641 + +2.1 321,693 - +0.9 321,825 + OLJFJH_01820 0.22 +1.8 322,098 + OLJFJH_01820 0.49 +2.7 322,346 - OLJFJH_01820 0.74 +2.1 322,401 + OLJFJH_01820 0.79 +1.0 322,402 - OLJFJH_01820 0.79 +1.9 322,402 - OLJFJH_01820 0.79 +2.2 322,402 - OLJFJH_01820 0.79 +2.0 322,487 - OLJFJH_01820 0.88 +1.5 322,520 - +1.8 322,520 - +1.6 322,602 + +2.0 322,602 + +1.8 322,603 - +0.9 322,609 + +1.8 322,610 - +1.5 322,610 - +1.9 322,610 - +0.4 322,626 + +1.2 322,627 - +0.6 322,630 - +1.7 322,645 + +1.5 322,722 + OLJFJH_01825 0.12 -0.8 322,722 + OLJFJH_01825 0.12 -0.8 322,722 + OLJFJH_01825 0.12 -0.5 322,722 + OLJFJH_01825 0.12 -1.0 322,722 + OLJFJH_01825 0.12 -1.2 322,722 + OLJFJH_01825 0.12 +0.3 322,801 + OLJFJH_01825 0.22 -0.7 322,810 + OLJFJH_01825 0.23 +0.1 322,811 - OLJFJH_01825 0.23 -1.4 322,811 - OLJFJH_01825 0.23 -0.6 322,811 - OLJFJH_01825 0.23 -0.3 322,828 + OLJFJH_01825 0.25 -0.9 322,828 + OLJFJH_01825 0.25 -0.4 322,829 - OLJFJH_01825 0.25 -1.8 322,893 - OLJFJH_01825 0.33 -0.9 322,912 - OLJFJH_01825 0.36 -0.0 322,912 - OLJFJH_01825 0.36 -1.4 323,037 + OLJFJH_01825 0.51 -1.3 323,038 - OLJFJH_01825 0.52 +0.1 323,044 - OLJFJH_01825 0.52 -1.4 323,044 - OLJFJH_01825 0.52 -1.6 323,061 + OLJFJH_01825 0.54 -0.3 323,062 - OLJFJH_01825 0.55 -1.3 323,143 + OLJFJH_01825 0.65 -0.9 323,205 + OLJFJH_01825 0.73 -0.1 323,374 + -0.5 323,413 + -0.1 323,416 + -0.0 323,453 + +1.8 323,474 + +1.0 323,475 - +0.8 323,475 - +2.0 323,544 - +1.0 323,664 + OLJFJH_01830 0.13 +1.8 323,665 - OLJFJH_01830 0.13 +1.1 323,665 - OLJFJH_01830 0.13 +1.9 323,665 - OLJFJH_01830 0.13 +2.4 323,665 - OLJFJH_01830 0.13 +2.1 323,794 + OLJFJH_01830 0.20 +1.6 323,866 + OLJFJH_01830 0.24 +1.5 323,867 - OLJFJH_01830 0.24 +2.0 323,867 - OLJFJH_01830 0.24 +0.4 323,925 + OLJFJH_01830 0.27 +2.7 323,925 + OLJFJH_01830 0.27 +1.7 323,925 + OLJFJH_01830 0.27 +1.2 323,925 + OLJFJH_01830 0.27 +1.7 323,926 - OLJFJH_01830 0.28 +2.6 323,926 - OLJFJH_01830 0.28 +0.2 323,926 - OLJFJH_01830 0.28 +1.3 323,977 - OLJFJH_01830 0.30 +2.0 324,124 - OLJFJH_01830 0.38 +1.9
Or see this region's nucleotide sequence