Experiment: Matrix:pear;Phage:PBS;Temp:17;Samp:8-6
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01480 and OLJFJH_01485 are separated by 63 nucleotides OLJFJH_01485 and OLJFJH_01490 are separated by 3 nucleotides OLJFJH_01490 and OLJFJH_01495 are separated by 2 nucleotides
OLJFJH_01480: OLJFJH_01480 - peroxide stress protein YaaA, at 241,644 to 242,420
_01480
OLJFJH_01485: OLJFJH_01485 - threonine synthase, at 242,484 to 243,770
_01485
OLJFJH_01490: OLJFJH_01490 - homoserine kinase, at 243,774 to 244,703
_01490
OLJFJH_01495: OLJFJH_01495 - bifunctional aspartate kinase/homoserine dehydrogenase I, at 244,706 to 247,168
_01495
Position (kb)
242
243
244 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 241.502 kb on + strand at 241.503 kb on - strand at 241.503 kb on - strand at 241.558 kb on + strand at 241.796 kb on + strand, within OLJFJH_01480 at 241.797 kb on - strand, within OLJFJH_01480 at 241.905 kb on + strand, within OLJFJH_01480 at 241.905 kb on + strand, within OLJFJH_01480 at 241.905 kb on + strand, within OLJFJH_01480 at 241.905 kb on + strand, within OLJFJH_01480 at 241.906 kb on - strand, within OLJFJH_01480 at 241.970 kb on + strand, within OLJFJH_01480 at 242.042 kb on + strand, within OLJFJH_01480 at 242.042 kb on + strand, within OLJFJH_01480 at 242.042 kb on + strand, within OLJFJH_01480 at 242.043 kb on - strand, within OLJFJH_01480 at 242.262 kb on + strand, within OLJFJH_01480 at 242.268 kb on - strand, within OLJFJH_01480 at 242.295 kb on + strand, within OLJFJH_01480 at 242.295 kb on + strand, within OLJFJH_01480 at 242.296 kb on - strand, within OLJFJH_01480 at 242.438 kb on - strand at 242.485 kb on + strand at 242.485 kb on + strand at 242.486 kb on - strand at 242.673 kb on + strand, within OLJFJH_01485 at 242.846 kb on + strand, within OLJFJH_01485 at 242.846 kb on + strand, within OLJFJH_01485 at 242.847 kb on - strand, within OLJFJH_01485 at 242.847 kb on - strand, within OLJFJH_01485 at 242.960 kb on + strand, within OLJFJH_01485 at 243.091 kb on + strand, within OLJFJH_01485 at 243.091 kb on + strand, within OLJFJH_01485 at 243.092 kb on - strand, within OLJFJH_01485 at 243.092 kb on - strand, within OLJFJH_01485 at 243.095 kb on - strand, within OLJFJH_01485 at 243.125 kb on + strand, within OLJFJH_01485 at 243.143 kb on + strand, within OLJFJH_01485 at 243.243 kb on - strand, within OLJFJH_01485 at 243.412 kb on + strand, within OLJFJH_01485 at 243.432 kb on - strand, within OLJFJH_01485 at 243.432 kb on - strand, within OLJFJH_01485 at 243.602 kb on + strand, within OLJFJH_01485 at 243.609 kb on - strand, within OLJFJH_01485 at 243.638 kb on + strand, within OLJFJH_01485 at 243.732 kb on + strand at 243.733 kb on - strand at 243.752 kb on + strand at 243.759 kb on - strand at 243.759 kb on - strand at 243.760 kb on + strand at 243.760 kb on + strand at 243.761 kb on - strand at 243.771 kb on - strand at 243.786 kb on - strand at 243.804 kb on + strand at 243.816 kb on - strand at 243.870 kb on - strand, within OLJFJH_01490 at 243.893 kb on + strand, within OLJFJH_01490 at 244.017 kb on + strand, within OLJFJH_01490 at 244.017 kb on + strand, within OLJFJH_01490 at 244.017 kb on + strand, within OLJFJH_01490 at 244.017 kb on + strand, within OLJFJH_01490 at 244.018 kb on - strand, within OLJFJH_01490 at 244.018 kb on - strand, within OLJFJH_01490 at 244.058 kb on + strand, within OLJFJH_01490 at 244.059 kb on - strand, within OLJFJH_01490 at 244.104 kb on - strand, within OLJFJH_01490 at 244.106 kb on + strand, within OLJFJH_01490 at 244.106 kb on + strand, within OLJFJH_01490 at 244.107 kb on - strand, within OLJFJH_01490 at 244.326 kb on + strand, within OLJFJH_01490 at 244.330 kb on - strand, within OLJFJH_01490 at 244.351 kb on - strand, within OLJFJH_01490 at 244.508 kb on - strand, within OLJFJH_01490 at 244.707 kb on + strand at 244.732 kb on + strand at 244.732 kb on + strand at 244.732 kb on + strand at 244.732 kb on + strand at 244.736 kb on + strand at 244.751 kb on + strand at 244.751 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:PBS;Temp:17;Samp:8-6 remove 241,502 + +0.2 241,503 - +0.1 241,503 - +0.0 241,558 + +1.5 241,796 + OLJFJH_01480 0.20 +0.1 241,797 - OLJFJH_01480 0.20 +0.5 241,905 + OLJFJH_01480 0.34 -0.2 241,905 + OLJFJH_01480 0.34 +0.2 241,905 + OLJFJH_01480 0.34 -0.2 241,905 + OLJFJH_01480 0.34 -0.2 241,906 - OLJFJH_01480 0.34 -0.5 241,970 + OLJFJH_01480 0.42 -0.7 242,042 + OLJFJH_01480 0.51 -0.6 242,042 + OLJFJH_01480 0.51 -0.5 242,042 + OLJFJH_01480 0.51 +0.6 242,043 - OLJFJH_01480 0.51 -0.6 242,262 + OLJFJH_01480 0.80 -0.3 242,268 - OLJFJH_01480 0.80 +0.7 242,295 + OLJFJH_01480 0.84 -0.5 242,295 + OLJFJH_01480 0.84 -0.5 242,296 - OLJFJH_01480 0.84 -0.6 242,438 - -0.6 242,485 + +1.1 242,485 + +0.1 242,486 - -0.3 242,673 + OLJFJH_01485 0.15 -3.6 242,846 + OLJFJH_01485 0.28 -3.9 242,846 + OLJFJH_01485 0.28 -2.3 242,847 - OLJFJH_01485 0.28 -3.2 242,847 - OLJFJH_01485 0.28 -3.8 242,960 + OLJFJH_01485 0.37 -3.4 243,091 + OLJFJH_01485 0.47 -5.1 243,091 + OLJFJH_01485 0.47 -2.4 243,092 - OLJFJH_01485 0.47 -4.9 243,092 - OLJFJH_01485 0.47 -2.7 243,095 - OLJFJH_01485 0.47 -1.4 243,125 + OLJFJH_01485 0.50 -2.7 243,143 + OLJFJH_01485 0.51 -2.4 243,243 - OLJFJH_01485 0.59 -3.1 243,412 + OLJFJH_01485 0.72 -3.4 243,432 - OLJFJH_01485 0.74 -2.9 243,432 - OLJFJH_01485 0.74 -3.0 243,602 + OLJFJH_01485 0.87 -2.5 243,609 - OLJFJH_01485 0.87 -2.4 243,638 + OLJFJH_01485 0.90 -3.9 243,732 + -1.0 243,733 - -1.6 243,752 + -2.9 243,759 - -2.9 243,759 - -0.2 243,760 + -4.7 243,760 + -1.6 243,761 - -2.7 243,771 - +0.2 243,786 - +0.0 243,804 + -0.8 243,816 - -1.2 243,870 - OLJFJH_01490 0.10 -3.4 243,893 + OLJFJH_01490 0.13 -2.0 244,017 + OLJFJH_01490 0.26 -2.7 244,017 + OLJFJH_01490 0.26 -2.2 244,017 + OLJFJH_01490 0.26 -2.4 244,017 + OLJFJH_01490 0.26 -1.7 244,018 - OLJFJH_01490 0.26 -0.0 244,018 - OLJFJH_01490 0.26 -3.4 244,058 + OLJFJH_01490 0.31 -2.0 244,059 - OLJFJH_01490 0.31 -1.9 244,104 - OLJFJH_01490 0.35 -2.9 244,106 + OLJFJH_01490 0.36 -3.1 244,106 + OLJFJH_01490 0.36 -1.0 244,107 - OLJFJH_01490 0.36 -3.5 244,326 + OLJFJH_01490 0.59 -1.2 244,330 - OLJFJH_01490 0.60 -4.1 244,351 - OLJFJH_01490 0.62 -2.0 244,508 - OLJFJH_01490 0.79 -2.2 244,707 + -2.8 244,732 + -2.8 244,732 + -2.2 244,732 + -2.3 244,732 + -3.2 244,736 + -1.9 244,751 + -2.1 244,751 + -2.3
Or see this region's nucleotide sequence