Strain Fitness in Bacteroides stercoris CC31F around HMPREF1181_RS04415

Experiment: Locust bean gum 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Locust bean gum 2.5 mg/mL (C)
119,225	-		HMPREF1181_RS04405	0.35	-0.2
119,236	-		HMPREF1181_RS04405	0.37	+0.1
119,278	+		HMPREF1181_RS04405	0.43	-5.3
119,366	+		HMPREF1181_RS04405	0.57	-2.5
119,382	-		HMPREF1181_RS04405	0.60	-6.6
119,418	-		HMPREF1181_RS04405	0.65	-2.2
119,418	-		HMPREF1181_RS04405	0.65	-1.6
119,418	-		HMPREF1181_RS04405	0.65	-0.6
119,421	+		HMPREF1181_RS04405	0.66	-1.6
119,422	-		HMPREF1181_RS04405	0.66	-0.1
119,501	+		HMPREF1181_RS04405	0.78	-7.6
119,502	-		HMPREF1181_RS04405	0.79	-1.4
119,502	-		HMPREF1181_RS04405	0.79	-6.1
119,563	+		HMPREF1181_RS04405	0.88	-1.1
119,607	+				-2.9
119,658	-				-1.4
119,662	-				-1.0
119,669	+				-1.9
119,670	-				-2.2
119,697	+				-0.9
119,698	-				-0.7
119,708	-				-0.4
119,737	-				-1.6
119,745	+		HMPREF1181_RS04410	0.12	-1.0
119,749	-		HMPREF1181_RS04410	0.13	+0.3
119,802	-		HMPREF1181_RS04410	0.24	-3.5
119,830	+		HMPREF1181_RS04410	0.30	+0.2
119,842	+		HMPREF1181_RS04410	0.33	-0.4
119,849	-		HMPREF1181_RS04410	0.34	-0.2
119,849	-		HMPREF1181_RS04410	0.34	+2.0
119,889	-		HMPREF1181_RS04410	0.43	-1.0
119,929	+		HMPREF1181_RS04410	0.52	+0.3
120,075	-		HMPREF1181_RS04410	0.83	-2.7
120,088	+		HMPREF1181_RS04410	0.86	-6.2
120,088	+		HMPREF1181_RS04410	0.86	+0.5
120,093	-		HMPREF1181_RS04410	0.87	-0.3
120,179	+				+0.2
120,179	+				-5.2
120,180	-				-2.6
120,208	+				+0.2
120,234	+				+0.8
120,243	+				-2.0
120,244	-				-5.5
120,342	+		HMPREF1181_RS04415	0.26	-0.4
120,385	+		HMPREF1181_RS04415	0.34	-1.0
120,486	+		HMPREF1181_RS04415	0.52	-4.4
120,486	+		HMPREF1181_RS04415	0.52	-0.1
120,486	+		HMPREF1181_RS04415	0.52	+1.4
120,487	-		HMPREF1181_RS04415	0.52	-1.4
120,494	-		HMPREF1181_RS04415	0.53	-3.7
120,532	+		HMPREF1181_RS04415	0.60	+1.2
120,573	+		HMPREF1181_RS04415	0.68	+0.2
120,615	+		HMPREF1181_RS04415	0.75	+0.5
120,615	+		HMPREF1181_RS04415	0.75	-1.0
120,617	+		HMPREF1181_RS04415	0.76	+0.1
120,618	-		HMPREF1181_RS04415	0.76	-4.3
120,674	-		HMPREF1181_RS04415	0.86	-2.0
120,690	+		HMPREF1181_RS04415	0.89	-1.0
120,691	-		HMPREF1181_RS04415	0.89	-1.9
120,692	+		HMPREF1181_RS04415	0.89	-0.8
120,720	+				+0.9
120,767	-				-2.2
120,845	-				-0.2
120,887	-				-5.6
120,925	+				-5.2
120,988	+				-0.3
120,988	+				+1.1
120,989	-				-4.0
121,006	-				+0.4
121,007	+				+0.3
121,050	+				-2.9
121,099	+				-2.5
121,100	-				+2.0
121,104	-				+0.5
121,105	+				-0.1
121,120	-				-0.2
121,146	+				-0.6
121,147	-				+2.3
121,197	+				+0.4
121,293	+				+3.5
121,294	-				-1.6
121,294	-				-0.7
121,298	+				+1.4
121,298	+				+1.4
121,304	-				-1.5
121,345	-				+0.5
121,345	-				-0.2
121,366	+				-0.4
121,366	+				+2.3
121,367	-				-1.4
121,367	-				-3.4
121,367	-				-1.9
121,423	-				+1.0
121,423	-				+0.4
121,523	+				-3.3
121,540	-				+0.3
121,550	+				+2.3
121,553	-				+1.9
121,561	+				+1.9
121,562	-				+0.6
121,580	-				-1.2