Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24925

Experiment: Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)
4,754,600	-		LU632_RS24915	0.17	+0.7
4,755,498	+		LU632_RS24925	0.20	-2.1
4,755,624	+		LU632_RS24925	0.87	+1.9
4,755,687	+				-2.0
4,755,688	-				+1.2
4,755,703	+				+2.9
4,755,705	+				+0.2
4,755,770	-				+0.8
4,755,864	-				+1.4
4,755,931	+				+2.1
4,755,931	+				+0.3
4,755,931	+				-0.8
4,755,932	-				-1.2
4,756,039	+				-0.8
4,756,039	+				+0.3
4,756,039	+				+0.1
4,756,039	+				-1.6
4,756,040	-				-1.2
4,756,057	-				+1.5
4,756,075	-				-1.6
4,756,123	+				-0.8
4,756,124	-				+0.5
4,756,245	+		LU632_RS24930	0.15	-0.4
4,756,333	-		LU632_RS24930	0.23	+1.8
4,756,340	-		LU632_RS24930	0.23	+0.2
4,756,382	+		LU632_RS24930	0.27	-1.1
4,756,382	+		LU632_RS24930	0.27	-0.3
4,756,382	+		LU632_RS24930	0.27	+0.2
4,756,383	-		LU632_RS24930	0.27	-2.5
4,756,443	+		LU632_RS24930	0.32	+1.6
4,756,504	+		LU632_RS24930	0.37	-0.2
4,756,505	-		LU632_RS24930	0.37	+0.9
4,756,505	-		LU632_RS24930	0.37	-0.1
4,756,571	-		LU632_RS24930	0.43	-2.3
4,756,571	-		LU632_RS24930	0.43	+1.8
4,756,622	-		LU632_RS24930	0.47	+1.8