Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS15395

Experiment: Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)
2,914,286	-				-1.9
2,914,481	-	lepA	LU632_RS15395	0.12	-3.1
2,914,763	-	lepA	LU632_RS15395	0.28	-2.1
2,914,830	-	lepA	LU632_RS15395	0.32	+0.7
2,914,835	-	lepA	LU632_RS15395	0.32	+0.7
2,914,835	-	lepA	LU632_RS15395	0.32	-1.7
2,914,835	-	lepA	LU632_RS15395	0.32	-3.0
2,915,054	+	lepA	LU632_RS15395	0.44	-2.5
2,915,283	-	lepA	LU632_RS15395	0.57	-1.3
2,915,311	+	lepA	LU632_RS15395	0.59	-0.9
2,915,448	+	lepA	LU632_RS15395	0.66	-1.9
2,915,449	-	lepA	LU632_RS15395	0.66	-2.5
2,915,452	+	lepA	LU632_RS15395	0.66	+1.0
2,915,453	-	lepA	LU632_RS15395	0.67	-1.9
2,915,799	+	lepA	LU632_RS15395	0.86	-1.6
2,915,880	-				+0.7
2,915,897	-				+0.3
2,916,157	-				+5.0
2,916,190	+				-0.5
2,916,191	-				-2.6
2,916,191	-				+2.0
2,916,191	-				-0.2
2,916,210	-				-2.1