Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10660

Experiment: Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)
2,032,858	+				+0.7
2,033,095	+				-3.2
2,033,095	+				-4.1
2,033,233	-				-0.3
2,033,442	+				+0.9
2,033,555	-				-2.2
2,033,595	-				+0.7
2,033,763	-		LU632_RS10660	0.36	-1.6
2,034,022	-		LU632_RS10665	0.14	-3.4
2,034,145	+		LU632_RS10665	0.55	-0.2
2,034,152	+		LU632_RS10665	0.58	+0.7
2,034,591	+				-0.8
2,034,746	+		LU632_RS10670	0.25	+2.4
2,034,819	-		LU632_RS10670	0.38	-1.2
2,034,819	-		LU632_RS10670	0.38	-1.6
2,034,855	+		LU632_RS10670	0.44	-2.6
2,034,855	+		LU632_RS10670	0.44	+0.7
2,034,948	+		LU632_RS10670	0.61	-1.6
2,034,957	-		LU632_RS10670	0.62	+1.9