Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS07830

Experiment: Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)
1,460,686	+		LU632_RS07820	0.86	-1.0
1,461,159	+	truA	LU632_RS07825	0.41	+0.6
1,461,637	+				+0.6
1,461,637	+				-2.5
1,461,653	+				+0.3
1,461,653	+				+1.5
1,461,668	+				+0.7
1,461,669	-				-0.1
1,461,741	+		LU632_RS07830	0.11	-0.1
1,461,757	-		LU632_RS07830	0.13	-0.5
1,461,764	-		LU632_RS07830	0.14	-0.1
1,461,797	-		LU632_RS07830	0.19	+0.4
1,461,936	+		LU632_RS07830	0.40	+2.0
1,461,936	+		LU632_RS07830	0.40	+1.9
1,462,006	-		LU632_RS07830	0.51	+0.7
1,462,118	+		LU632_RS07830	0.68	+0.9
1,462,118	+		LU632_RS07830	0.68	+0.6
1,462,118	+		LU632_RS07830	0.68	+2.8
1,462,118	+		LU632_RS07830	0.68	+2.2
1,462,119	-		LU632_RS07830	0.68	-0.2
1,462,119	-		LU632_RS07830	0.68	+0.9
1,462,143	+		LU632_RS07830	0.72	-2.1
1,462,144	-		LU632_RS07830	0.72	+0.8
1,462,146	-		LU632_RS07830	0.72	-2.3
1,462,152	-		LU632_RS07830	0.73	-2.9
1,462,185	+		LU632_RS07830	0.78	+0.6
1,462,194	+		LU632_RS07830	0.80	+0.1
1,462,230	-		LU632_RS07830	0.85	-1.5
1,462,359	+				-1.0
1,462,360	-				+1.3
1,462,430	+				-0.5
1,462,445	+				+3.7
1,462,610	-				+0.2
1,462,610	-				-0.0
1,462,615	-				+2.4
1,462,622	-				-0.3
1,462,628	-				+0.3
1,462,897	+		LU632_RS07835	0.52	-2.2
1,462,898	-		LU632_RS07835	0.52	-1.4
1,463,034	+		LU632_RS07835	0.78	+0.2
1,463,035	-		LU632_RS07835	0.78	+1.4
1,463,171	-				-1.2
1,463,208	-				+1.4
1,463,247	+				-0.1
1,463,248	-				-0.1
1,463,314	+				-3.7