Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS06990

Experiment: Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Main Stem (TE2-S-C4-MS)
1,331,607	+		LU632_RS06980	0.13	-0.7
1,331,608	-		LU632_RS06980	0.14	-0.9
1,331,694	+		LU632_RS06980	0.69	-1.4
1,332,060	+		LU632_RS06985	0.66	+0.6
1,332,228	-				-1.3
1,332,301	-				+1.0
1,332,415	+				-0.4
1,332,416	-				-1.0
1,332,493	+		LU632_RS06990	0.26	-1.5
1,332,524	-		LU632_RS06990	0.32	+0.8
1,332,559	+		LU632_RS06990	0.39	+0.5
1,332,591	-		LU632_RS06990	0.46	+0.9
1,332,711	+		LU632_RS06990	0.70	-1.2
1,332,712	-		LU632_RS06990	0.70	-0.2
1,332,959	-		LU632_RS06995	0.38	+0.2
1,332,970	+		LU632_RS06995	0.42	-0.5
1,333,103	-				-1.2
1,333,186	+				+1.1
1,333,201	-				+0.8
1,333,219	+				+1.8
1,333,220	-				-2.9
1,333,246	+				-2.9
1,333,246	+				+0.8
1,333,247	-				-0.1
1,333,320	-				+1.7
1,333,342	-				+0.6
1,333,529	+				-0.3
1,333,529	+				+0.8
1,333,529	+				-0.2