Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_04111 and OHPLBJKB_04112 are separated by 276 nucleotides OHPLBJKB_04112 and OHPLBJKB_04113 are separated by 183 nucleotides OHPLBJKB_04113 and OHPLBJKB_04114 are separated by 6 nucleotides OHPLBJKB_04114 and OHPLBJKB_04115 are separated by 54 nucleotides
OHPLBJKB_04111: OHPLBJKB_04111 - Cystathionine gamma-synthase, at 4,327,534 to 4,328,694
_04111
OHPLBJKB_04112: OHPLBJKB_04112 - Met repressor, at 4,328,971 to 4,329,288
_04112
OHPLBJKB_04113: OHPLBJKB_04113 - hypothetical protein, at 4,329,472 to 4,330,080
_04113
OHPLBJKB_04114: OHPLBJKB_04114 - hypothetical protein, at 4,330,087 to 4,330,710
_04114
OHPLBJKB_04115: OHPLBJKB_04115 - 50S ribosomal protein L31, at 4,330,765 to 4,330,977
_04115
Position (kb) 4329
4330
4331 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 4328.559 kb on - strand, within OHPLBJKB_04111 at 4328.559 kb on - strand, within OHPLBJKB_04111 at 4328.595 kb on + strand at 4328.596 kb on - strand at 4328.596 kb on - strand at 4328.597 kb on + strand at 4328.597 kb on + strand at 4328.598 kb on - strand at 4328.598 kb on - strand at 4328.598 kb on - strand at 4328.598 kb on - strand at 4328.598 kb on - strand at 4328.637 kb on - strand at 4328.637 kb on - strand at 4328.653 kb on + strand at 4328.685 kb on + strand at 4328.830 kb on + strand at 4328.830 kb on + strand at 4328.832 kb on + strand at 4328.832 kb on + strand at 4328.833 kb on - strand at 4328.833 kb on - strand at 4328.833 kb on - strand at 4328.839 kb on + strand at 4328.859 kb on + strand at 4328.859 kb on + strand at 4328.859 kb on + strand at 4328.859 kb on + strand at 4328.859 kb on + strand at 4328.860 kb on - strand at 4328.860 kb on - strand at 4328.860 kb on - strand at 4328.893 kb on + strand at 4328.893 kb on + strand at 4328.894 kb on - strand at 4328.894 kb on - strand at 4328.894 kb on - strand at 4328.894 kb on - strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.961 kb on + strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.962 kb on - strand at 4328.965 kb on + strand at 4328.965 kb on + strand at 4328.965 kb on + strand at 4328.965 kb on + strand at 4328.966 kb on - strand at 4328.992 kb on + strand at 4328.992 kb on + strand at 4328.992 kb on + strand at 4328.993 kb on - strand at 4328.994 kb on + strand at 4328.994 kb on + strand at 4328.994 kb on + strand at 4328.994 kb on + strand at 4328.994 kb on + strand at 4328.994 kb on + strand at 4328.995 kb on - strand at 4329.064 kb on - strand, within OHPLBJKB_04112 at 4329.064 kb on - strand, within OHPLBJKB_04112 at 4329.283 kb on + strand at 4329.286 kb on + strand at 4329.287 kb on - strand at 4329.329 kb on + strand at 4329.344 kb on + strand at 4329.352 kb on - strand at 4329.454 kb on - strand at 4329.455 kb on + strand at 4329.455 kb on + strand at 4329.455 kb on + strand at 4329.455 kb on + strand at 4329.455 kb on + strand at 4329.455 kb on + strand at 4329.456 kb on - strand at 4329.456 kb on - strand at 4329.456 kb on - strand at 4329.467 kb on + strand at 4329.467 kb on + strand at 4329.468 kb on - strand at 4329.468 kb on - strand at 4329.468 kb on - strand at 4329.468 kb on - strand at 4329.468 kb on - strand at 4329.468 kb on - strand at 4329.468 kb on - strand at 4329.472 kb on - strand at 4329.513 kb on - strand at 4329.579 kb on + strand, within OHPLBJKB_04113 at 4329.579 kb on + strand, within OHPLBJKB_04113 at 4329.613 kb on - strand, within OHPLBJKB_04113 at 4329.613 kb on - strand, within OHPLBJKB_04113 at 4329.624 kb on + strand, within OHPLBJKB_04113 at 4329.682 kb on + strand, within OHPLBJKB_04113 at 4329.682 kb on + strand, within OHPLBJKB_04113 at 4329.683 kb on - strand, within OHPLBJKB_04113 at 4329.683 kb on - strand, within OHPLBJKB_04113 at 4329.683 kb on - strand, within OHPLBJKB_04113 at 4329.727 kb on + strand, within OHPLBJKB_04113 at 4329.727 kb on + strand, within OHPLBJKB_04113 at 4329.727 kb on + strand, within OHPLBJKB_04113 at 4329.727 kb on + strand, within OHPLBJKB_04113 at 4329.727 kb on + strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.728 kb on - strand, within OHPLBJKB_04113 at 4329.807 kb on + strand, within OHPLBJKB_04113 at 4329.850 kb on + strand, within OHPLBJKB_04113 at 4329.850 kb on + strand, within OHPLBJKB_04113 at 4329.851 kb on - strand, within OHPLBJKB_04113 at 4329.851 kb on - strand, within OHPLBJKB_04113 at 4329.957 kb on + strand, within OHPLBJKB_04113 at 4329.958 kb on - strand, within OHPLBJKB_04113 at 4329.984 kb on + strand, within OHPLBJKB_04113 at 4329.985 kb on - strand, within OHPLBJKB_04113 at 4330.004 kb on + strand, within OHPLBJKB_04113 at 4330.004 kb on + strand, within OHPLBJKB_04113 at 4330.005 kb on - strand, within OHPLBJKB_04113 at 4330.005 kb on - strand, within OHPLBJKB_04113 at 4330.005 kb on - strand, within OHPLBJKB_04113 at 4330.079 kb on - strand at 4330.128 kb on + strand at 4330.129 kb on - strand at 4330.188 kb on + strand, within OHPLBJKB_04114 at 4330.188 kb on + strand, within OHPLBJKB_04114 at 4330.189 kb on - strand, within OHPLBJKB_04114 at 4330.189 kb on - strand, within OHPLBJKB_04114 at 4330.189 kb on - strand, within OHPLBJKB_04114 at 4330.191 kb on + strand, within OHPLBJKB_04114 at 4330.191 kb on + strand, within OHPLBJKB_04114 at 4330.191 kb on + strand, within OHPLBJKB_04114 at 4330.192 kb on - strand, within OHPLBJKB_04114 at 4330.192 kb on - strand, within OHPLBJKB_04114 at 4330.192 kb on - strand, within OHPLBJKB_04114 at 4330.195 kb on + strand, within OHPLBJKB_04114 at 4330.195 kb on + strand, within OHPLBJKB_04114 at 4330.195 kb on + strand, within OHPLBJKB_04114 at 4330.195 kb on + strand, within OHPLBJKB_04114 at 4330.195 kb on + strand, within OHPLBJKB_04114 at 4330.195 kb on + strand, within OHPLBJKB_04114 at 4330.196 kb on - strand, within OHPLBJKB_04114 at 4330.198 kb on - strand, within OHPLBJKB_04114 at 4330.298 kb on - strand, within OHPLBJKB_04114 at 4330.327 kb on + strand, within OHPLBJKB_04114 at 4330.344 kb on + strand, within OHPLBJKB_04114 at 4330.391 kb on + strand, within OHPLBJKB_04114 at 4330.391 kb on + strand, within OHPLBJKB_04114 at 4330.392 kb on - strand, within OHPLBJKB_04114 at 4330.430 kb on - strand, within OHPLBJKB_04114 at 4330.430 kb on - strand, within OHPLBJKB_04114 at 4330.450 kb on - strand, within OHPLBJKB_04114 at 4330.464 kb on + strand, within OHPLBJKB_04114 at 4330.465 kb on - strand, within OHPLBJKB_04114 at 4330.465 kb on - strand, within OHPLBJKB_04114 at 4330.487 kb on + strand, within OHPLBJKB_04114 at 4330.487 kb on + strand, within OHPLBJKB_04114 at 4330.487 kb on + strand, within OHPLBJKB_04114 at 4330.488 kb on - strand, within OHPLBJKB_04114 at 4330.488 kb on - strand, within OHPLBJKB_04114 at 4330.493 kb on + strand, within OHPLBJKB_04114 at 4330.493 kb on + strand, within OHPLBJKB_04114 at 4330.497 kb on + strand, within OHPLBJKB_04114 at 4330.497 kb on + strand, within OHPLBJKB_04114 at 4330.498 kb on - strand, within OHPLBJKB_04114 at 4330.558 kb on + strand, within OHPLBJKB_04114 at 4330.558 kb on + strand, within OHPLBJKB_04114 at 4330.558 kb on + strand, within OHPLBJKB_04114 at 4330.559 kb on - strand, within OHPLBJKB_04114 at 4330.559 kb on - strand, within OHPLBJKB_04114 at 4330.559 kb on - strand, within OHPLBJKB_04114 at 4330.577 kb on - strand, within OHPLBJKB_04114 at 4330.608 kb on + strand, within OHPLBJKB_04114 at 4330.608 kb on + strand, within OHPLBJKB_04114 at 4330.609 kb on - strand, within OHPLBJKB_04114 at 4330.615 kb on - strand, within OHPLBJKB_04114 at 4330.617 kb on + strand, within OHPLBJKB_04114 at 4330.618 kb on - strand, within OHPLBJKB_04114 at 4330.618 kb on - strand, within OHPLBJKB_04114 at 4330.695 kb on - strand at 4331.048 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 4,328,559 - OHPLBJKB_04111 0.88 +1.3 4,328,559 - OHPLBJKB_04111 0.88 -0.4 4,328,595 + +0.9 4,328,596 - -0.1 4,328,596 - -0.8 4,328,597 + -1.0 4,328,597 + -0.8 4,328,598 - -0.1 4,328,598 - -0.2 4,328,598 - -0.8 4,328,598 - -0.7 4,328,598 - +0.0 4,328,637 - -0.5 4,328,637 - -0.5 4,328,653 + -0.3 4,328,685 + +0.0 4,328,830 + -0.1 4,328,830 + -0.5 4,328,832 + -0.5 4,328,832 + +0.0 4,328,833 - +0.3 4,328,833 - -1.8 4,328,833 - -1.1 4,328,839 + +0.7 4,328,859 + +0.9 4,328,859 + +0.7 4,328,859 + +0.1 4,328,859 + +1.5 4,328,859 + -0.1 4,328,860 - -0.3 4,328,860 - -1.8 4,328,860 - +0.5 4,328,893 + -0.2 4,328,893 + +1.1 4,328,894 - +0.7 4,328,894 - -0.8 4,328,894 - +1.3 4,328,894 - -0.5 4,328,961 + -0.3 4,328,961 + -0.3 4,328,961 + -0.3 4,328,961 + -2.3 4,328,961 + +1.0 4,328,961 + -0.7 4,328,961 + +1.0 4,328,961 + +0.7 4,328,961 + -0.8 4,328,961 + -0.8 4,328,962 - -1.7 4,328,962 - -1.6 4,328,962 - +0.7 4,328,962 - +0.3 4,328,962 - -0.7 4,328,962 - -0.5 4,328,962 - -0.8 4,328,962 - -1.7 4,328,962 - +0.3 4,328,962 - +0.3 4,328,962 - +0.0 4,328,962 - -1.6 4,328,962 - -1.3 4,328,965 + -0.8 4,328,965 + -0.3 4,328,965 + +0.0 4,328,965 + +0.0 4,328,966 - +0.7 4,328,992 + +0.3 4,328,992 + +2.3 4,328,992 + +0.0 4,328,993 - -0.7 4,328,994 + +0.5 4,328,994 + -2.5 4,328,994 + -0.3 4,328,994 + -1.1 4,328,994 + -2.3 4,328,994 + +0.3 4,328,995 - +0.0 4,329,064 - OHPLBJKB_04112 0.29 +0.7 4,329,064 - OHPLBJKB_04112 0.29 -1.5 4,329,283 + +0.7 4,329,286 + -1.0 4,329,287 - -0.1 4,329,329 + -1.1 4,329,344 + +1.3 4,329,352 - +0.2 4,329,454 - -2.4 4,329,455 + -0.1 4,329,455 + +0.3 4,329,455 + +1.0 4,329,455 + +0.7 4,329,455 + +0.4 4,329,455 + -0.0 4,329,456 - -1.8 4,329,456 - +0.9 4,329,456 - +0.6 4,329,467 + -0.7 4,329,467 + -0.1 4,329,468 - -0.9 4,329,468 - -1.6 4,329,468 - -0.3 4,329,468 - -1.4 4,329,468 - +0.3 4,329,468 - +0.5 4,329,468 - -0.2 4,329,472 - -1.1 4,329,513 - +0.5 4,329,579 + OHPLBJKB_04113 0.18 +0.2 4,329,579 + OHPLBJKB_04113 0.18 +0.1 4,329,613 - OHPLBJKB_04113 0.23 -1.1 4,329,613 - OHPLBJKB_04113 0.23 +0.1 4,329,624 + OHPLBJKB_04113 0.25 -2.4 4,329,682 + OHPLBJKB_04113 0.34 -0.0 4,329,682 + OHPLBJKB_04113 0.34 +0.7 4,329,683 - OHPLBJKB_04113 0.35 -0.4 4,329,683 - OHPLBJKB_04113 0.35 -1.3 4,329,683 - OHPLBJKB_04113 0.35 +0.8 4,329,727 + OHPLBJKB_04113 0.42 +0.6 4,329,727 + OHPLBJKB_04113 0.42 -0.9 4,329,727 + OHPLBJKB_04113 0.42 -0.3 4,329,727 + OHPLBJKB_04113 0.42 -0.8 4,329,727 + OHPLBJKB_04113 0.42 +0.2 4,329,728 - OHPLBJKB_04113 0.42 +0.9 4,329,728 - OHPLBJKB_04113 0.42 +0.9 4,329,728 - OHPLBJKB_04113 0.42 -0.9 4,329,728 - OHPLBJKB_04113 0.42 +1.0 4,329,728 - OHPLBJKB_04113 0.42 -0.7 4,329,728 - OHPLBJKB_04113 0.42 -2.1 4,329,728 - OHPLBJKB_04113 0.42 +0.1 4,329,728 - OHPLBJKB_04113 0.42 -0.8 4,329,728 - OHPLBJKB_04113 0.42 -1.2 4,329,807 + OHPLBJKB_04113 0.55 -0.6 4,329,850 + OHPLBJKB_04113 0.62 -0.3 4,329,850 + OHPLBJKB_04113 0.62 +0.0 4,329,851 - OHPLBJKB_04113 0.62 +0.1 4,329,851 - OHPLBJKB_04113 0.62 +1.6 4,329,957 + OHPLBJKB_04113 0.80 -0.2 4,329,958 - OHPLBJKB_04113 0.80 +0.3 4,329,984 + OHPLBJKB_04113 0.84 +0.9 4,329,985 - OHPLBJKB_04113 0.84 -0.0 4,330,004 + OHPLBJKB_04113 0.87 +0.2 4,330,004 + OHPLBJKB_04113 0.87 -0.6 4,330,005 - OHPLBJKB_04113 0.88 +0.5 4,330,005 - OHPLBJKB_04113 0.88 +0.3 4,330,005 - OHPLBJKB_04113 0.88 -0.4 4,330,079 - -0.3 4,330,128 + +0.6 4,330,129 - -0.3 4,330,188 + OHPLBJKB_04114 0.16 +0.4 4,330,188 + OHPLBJKB_04114 0.16 +2.9 4,330,189 - OHPLBJKB_04114 0.16 -2.0 4,330,189 - OHPLBJKB_04114 0.16 -0.7 4,330,189 - OHPLBJKB_04114 0.16 +0.4 4,330,191 + OHPLBJKB_04114 0.17 -1.6 4,330,191 + OHPLBJKB_04114 0.17 +0.0 4,330,191 + OHPLBJKB_04114 0.17 -0.8 4,330,192 - OHPLBJKB_04114 0.17 -1.3 4,330,192 - OHPLBJKB_04114 0.17 -1.5 4,330,192 - OHPLBJKB_04114 0.17 -0.4 4,330,195 + OHPLBJKB_04114 0.17 -1.0 4,330,195 + OHPLBJKB_04114 0.17 +0.5 4,330,195 + OHPLBJKB_04114 0.17 +0.9 4,330,195 + OHPLBJKB_04114 0.17 -0.4 4,330,195 + OHPLBJKB_04114 0.17 +0.1 4,330,195 + OHPLBJKB_04114 0.17 -0.9 4,330,196 - OHPLBJKB_04114 0.17 +0.5 4,330,198 - OHPLBJKB_04114 0.18 -1.1 4,330,298 - OHPLBJKB_04114 0.34 -0.2 4,330,327 + OHPLBJKB_04114 0.38 +0.9 4,330,344 + OHPLBJKB_04114 0.41 +0.3 4,330,391 + OHPLBJKB_04114 0.49 +0.5 4,330,391 + OHPLBJKB_04114 0.49 -0.8 4,330,392 - OHPLBJKB_04114 0.49 +0.8 4,330,430 - OHPLBJKB_04114 0.55 -0.8 4,330,430 - OHPLBJKB_04114 0.55 -0.8 4,330,450 - OHPLBJKB_04114 0.58 -0.7 4,330,464 + OHPLBJKB_04114 0.60 -2.6 4,330,465 - OHPLBJKB_04114 0.61 -0.5 4,330,465 - OHPLBJKB_04114 0.61 -0.8 4,330,487 + OHPLBJKB_04114 0.64 +0.9 4,330,487 + OHPLBJKB_04114 0.64 -1.4 4,330,487 + OHPLBJKB_04114 0.64 -0.1 4,330,488 - OHPLBJKB_04114 0.64 -1.1 4,330,488 - OHPLBJKB_04114 0.64 +0.5 4,330,493 + OHPLBJKB_04114 0.65 -0.7 4,330,493 + OHPLBJKB_04114 0.65 +0.2 4,330,497 + OHPLBJKB_04114 0.66 -0.1 4,330,497 + OHPLBJKB_04114 0.66 -0.8 4,330,498 - OHPLBJKB_04114 0.66 -0.2 4,330,558 + OHPLBJKB_04114 0.75 -3.0 4,330,558 + OHPLBJKB_04114 0.75 +1.2 4,330,558 + OHPLBJKB_04114 0.75 -0.1 4,330,559 - OHPLBJKB_04114 0.76 -1.1 4,330,559 - OHPLBJKB_04114 0.76 -0.6 4,330,559 - OHPLBJKB_04114 0.76 +1.1 4,330,577 - OHPLBJKB_04114 0.79 +0.0 4,330,608 + OHPLBJKB_04114 0.83 +0.5 4,330,608 + OHPLBJKB_04114 0.83 -0.5 4,330,609 - OHPLBJKB_04114 0.84 -0.3 4,330,615 - OHPLBJKB_04114 0.85 -1.1 4,330,617 + OHPLBJKB_04114 0.85 +0.3 4,330,618 - OHPLBJKB_04114 0.85 +0.8 4,330,618 - OHPLBJKB_04114 0.85 -0.6 4,330,695 - +0.3 4,331,048 - +1.3
Or see this region's nucleotide sequence