Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04016

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
4,212,537	-		OHPLBJKB_04015	0.36	+0.1
4,212,604	+		OHPLBJKB_04015	0.41	+1.3
4,212,605	-		OHPLBJKB_04015	0.41	-0.4
4,212,653	+		OHPLBJKB_04015	0.44	-0.1
4,212,653	+		OHPLBJKB_04015	0.44	-0.7
4,212,654	-		OHPLBJKB_04015	0.44	+1.1
4,212,715	+		OHPLBJKB_04015	0.48	+0.6
4,212,716	-		OHPLBJKB_04015	0.48	+0.0
4,212,759	+		OHPLBJKB_04015	0.51	-1.1
4,212,760	-		OHPLBJKB_04015	0.51	-1.9
4,212,837	+		OHPLBJKB_04015	0.57	-0.9
4,212,847	+		OHPLBJKB_04015	0.57	-0.7
4,212,894	-		OHPLBJKB_04015	0.60	+2.3
4,212,896	+		OHPLBJKB_04015	0.61	-0.4
4,212,958	+		OHPLBJKB_04015	0.65	+0.4
4,212,959	-		OHPLBJKB_04015	0.65	-0.5
4,213,000	+		OHPLBJKB_04015	0.68	+0.4
4,213,000	+		OHPLBJKB_04015	0.68	-0.6
4,213,000	+		OHPLBJKB_04015	0.68	+0.8
4,213,024	+		OHPLBJKB_04015	0.69	-1.1
4,213,066	+		OHPLBJKB_04015	0.72	-0.3
4,213,091	+		OHPLBJKB_04015	0.74	+1.0
4,213,120	-		OHPLBJKB_04015	0.76	-1.2
4,213,136	+		OHPLBJKB_04015	0.77	-0.0
4,213,136	+		OHPLBJKB_04015	0.77	-0.6
4,213,136	+		OHPLBJKB_04015	0.77	-0.3
4,213,136	+		OHPLBJKB_04015	0.77	+0.8
4,213,136	+		OHPLBJKB_04015	0.77	-0.3
4,213,136	+		OHPLBJKB_04015	0.77	+0.1
4,213,136	+		OHPLBJKB_04015	0.77	+0.4
4,213,137	-		OHPLBJKB_04015	0.77	-0.7
4,213,137	-		OHPLBJKB_04015	0.77	+1.5
4,213,208	-		OHPLBJKB_04015	0.82	+0.5
4,213,259	+		OHPLBJKB_04015	0.85	-0.2
4,213,259	+		OHPLBJKB_04015	0.85	+0.1
4,213,259	+		OHPLBJKB_04015	0.85	-1.4
4,213,259	+		OHPLBJKB_04015	0.85	-0.8
4,213,260	-		OHPLBJKB_04015	0.85	-1.4
4,213,351	+				-1.1
4,213,352	-				-0.6
4,213,375	+				+0.2
4,213,375	+				+0.3
4,213,375	+				-1.2
4,213,375	+				+1.5
4,213,376	-				+0.4
4,213,405	+				+0.5
4,213,405	+				+0.3
4,213,406	-				-0.5
4,213,468	+				+0.3
4,213,522	+				+0.6
4,213,660	+		OHPLBJKB_04016	0.34	+0.5
4,213,669	+		OHPLBJKB_04016	0.36	-1.8
4,213,670	-		OHPLBJKB_04016	0.36	-0.0
4,213,702	+		OHPLBJKB_04016	0.44	-0.2
4,213,703	-		OHPLBJKB_04016	0.44	-0.2
4,213,732	+		OHPLBJKB_04016	0.51	-0.2
4,213,733	-		OHPLBJKB_04016	0.52	-0.2
4,213,741	+		OHPLBJKB_04016	0.54	-1.0
4,213,768	+		OHPLBJKB_04016	0.60	+0.4
4,213,769	-		OHPLBJKB_04016	0.60	-1.0
4,213,898	+				+0.1
4,213,898	+				+1.0
4,213,899	-				+0.6
4,213,931	+				-0.2
4,213,931	+				+1.1
4,213,931	+				-1.2
4,213,932	-				+0.1
4,213,932	-				+1.2
4,213,937	+				-0.9
4,213,966	-				+0.1
4,213,966	-				+0.7
4,213,966	-				+0.4
4,213,968	-				+1.3
4,214,004	+				+0.2
4,214,005	-				-1.4
4,214,172	-				+0.4
4,214,185	+				+0.9
4,214,185	+				-1.4
4,214,186	-				-0.1
4,214,186	-				-1.4
4,214,227	+				-0.2
4,214,264	+				-0.1
4,214,264	+				+0.6
4,214,422	+				+0.7
4,214,503	+				-1.5
4,214,504	-				-0.0
4,214,504	-				+2.3
4,214,508	+				-1.3
4,214,509	-				+0.5
4,214,509	-				+0.6
4,214,509	-				-0.2
4,214,625	+				+0.3
4,214,625	+				-0.3
4,214,625	+				-0.5
4,214,625	+				+0.3
4,214,625	+				-1.4
4,214,626	-				+2.0
4,214,626	-				-0.4
4,214,626	-				+1.5
4,214,655	+				-0.2
4,214,674	+				-0.2
4,214,675	-				-0.8
4,214,675	-				+0.3
4,214,689	-		OHPLBJKB_04017	0.10	+0.9
4,214,760	+		OHPLBJKB_04017	0.14	+0.8
4,214,779	+		OHPLBJKB_04017	0.15	+0.5
4,214,780	-		OHPLBJKB_04017	0.15	+0.8
4,214,780	-		OHPLBJKB_04017	0.15	+0.1
4,214,845	-		OHPLBJKB_04017	0.18	-0.0
4,214,898	+		OHPLBJKB_04017	0.20	-1.2
4,214,898	+		OHPLBJKB_04017	0.20	-2.1