Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03582 and OHPLBJKB_03583 are separated by 838 nucleotides OHPLBJKB_03583 and OHPLBJKB_03584 overlap by 1 nucleotides
OHPLBJKB_03582: OHPLBJKB_03582 - HTH-type transcriptional regulator LeuO, at 3,755,395 to 3,756,339
_03582
OHPLBJKB_03583: OHPLBJKB_03583 - 2-isopropylmalate synthase, at 3,757,178 to 3,758,749
_03583
OHPLBJKB_03584: OHPLBJKB_03584 - 3-isopropylmalate dehydrogenase, at 3,758,749 to 3,759,840
_03584
Position (kb)
3757
3758
3759 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3756.198 kb on + strand, within OHPLBJKB_03582 at 3756.199 kb on - strand, within OHPLBJKB_03582 at 3756.199 kb on - strand, within OHPLBJKB_03582 at 3756.262 kb on + strand at 3756.263 kb on - strand at 3756.263 kb on - strand at 3756.263 kb on - strand at 3756.298 kb on + strand at 3756.329 kb on - strand at 3756.339 kb on + strand at 3756.343 kb on + strand at 3756.343 kb on + strand at 3756.343 kb on + strand at 3756.344 kb on - strand at 3756.344 kb on - strand at 3756.361 kb on + strand at 3756.361 kb on + strand at 3756.362 kb on - strand at 3756.424 kb on - strand at 3756.573 kb on + strand at 3756.836 kb on - strand at 3756.857 kb on - strand at 3756.879 kb on + strand at 3756.880 kb on - strand at 3756.880 kb on - strand at 3756.998 kb on - strand at 3756.998 kb on - strand at 3757.027 kb on + strand at 3757.028 kb on - strand at 3757.028 kb on - strand at 3757.028 kb on - strand at 3757.028 kb on - strand at 3757.030 kb on + strand at 3757.030 kb on + strand at 3757.031 kb on - strand at 3757.033 kb on + strand at 3757.033 kb on + strand at 3757.034 kb on - strand at 3757.037 kb on - strand at 3757.037 kb on - strand at 3757.083 kb on + strand at 3757.084 kb on - strand at 3757.156 kb on - strand at 3757.195 kb on + strand at 3757.233 kb on + strand at 3757.288 kb on + strand at 3757.289 kb on - strand at 3757.386 kb on + strand, within OHPLBJKB_03583 at 3757.386 kb on + strand, within OHPLBJKB_03583 at 3757.386 kb on + strand, within OHPLBJKB_03583 at 3757.387 kb on - strand, within OHPLBJKB_03583 at 3757.387 kb on - strand, within OHPLBJKB_03583 at 3757.387 kb on - strand, within OHPLBJKB_03583 at 3757.387 kb on - strand, within OHPLBJKB_03583 at 3757.387 kb on - strand, within OHPLBJKB_03583 at 3757.463 kb on - strand, within OHPLBJKB_03583 at 3757.468 kb on + strand, within OHPLBJKB_03583 at 3757.469 kb on - strand, within OHPLBJKB_03583 at 3757.469 kb on - strand, within OHPLBJKB_03583 at 3757.475 kb on - strand, within OHPLBJKB_03583 at 3757.543 kb on + strand, within OHPLBJKB_03583 at 3757.544 kb on - strand, within OHPLBJKB_03583 at 3757.547 kb on + strand, within OHPLBJKB_03583 at 3757.547 kb on + strand, within OHPLBJKB_03583 at 3757.547 kb on + strand, within OHPLBJKB_03583 at 3757.547 kb on + strand, within OHPLBJKB_03583 at 3757.547 kb on + strand, within OHPLBJKB_03583 at 3757.547 kb on + strand, within OHPLBJKB_03583 at 3757.547 kb on + strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.548 kb on - strand, within OHPLBJKB_03583 at 3757.549 kb on + strand, within OHPLBJKB_03583 at 3757.567 kb on + strand, within OHPLBJKB_03583 at 3757.612 kb on + strand, within OHPLBJKB_03583 at 3757.749 kb on + strand, within OHPLBJKB_03583 at 3757.771 kb on + strand, within OHPLBJKB_03583 at 3757.771 kb on + strand, within OHPLBJKB_03583 at 3757.772 kb on - strand, within OHPLBJKB_03583 at 3757.780 kb on - strand, within OHPLBJKB_03583 at 3757.783 kb on + strand, within OHPLBJKB_03583 at 3757.783 kb on + strand, within OHPLBJKB_03583 at 3757.784 kb on - strand, within OHPLBJKB_03583 at 3757.830 kb on + strand, within OHPLBJKB_03583 at 3757.830 kb on + strand, within OHPLBJKB_03583 at 3757.831 kb on - strand, within OHPLBJKB_03583 at 3757.931 kb on - strand, within OHPLBJKB_03583 at 3757.974 kb on + strand, within OHPLBJKB_03583 at 3757.992 kb on + strand, within OHPLBJKB_03583 at 3757.993 kb on - strand, within OHPLBJKB_03583 at 3757.993 kb on - strand, within OHPLBJKB_03583 at 3757.993 kb on - strand, within OHPLBJKB_03583 at 3758.008 kb on + strand, within OHPLBJKB_03583 at 3758.009 kb on - strand, within OHPLBJKB_03583 at 3758.108 kb on + strand, within OHPLBJKB_03583 at 3758.132 kb on - strand, within OHPLBJKB_03583 at 3758.214 kb on - strand, within OHPLBJKB_03583 at 3758.215 kb on + strand, within OHPLBJKB_03583 at 3758.230 kb on + strand, within OHPLBJKB_03583 at 3758.246 kb on + strand, within OHPLBJKB_03583 at 3758.486 kb on - strand, within OHPLBJKB_03583 at 3758.501 kb on + strand, within OHPLBJKB_03583 at 3758.501 kb on + strand, within OHPLBJKB_03583 at 3758.501 kb on + strand, within OHPLBJKB_03583 at 3758.502 kb on - strand, within OHPLBJKB_03583 at 3758.502 kb on - strand, within OHPLBJKB_03583 at 3758.503 kb on + strand, within OHPLBJKB_03583 at 3758.504 kb on - strand, within OHPLBJKB_03583 at 3758.523 kb on - strand, within OHPLBJKB_03583 at 3758.586 kb on - strand, within OHPLBJKB_03583 at 3758.586 kb on - strand, within OHPLBJKB_03583 at 3758.586 kb on - strand, within OHPLBJKB_03583 at 3758.586 kb on - strand, within OHPLBJKB_03583 at 3758.662 kb on - strand at 3758.662 kb on - strand at 3758.671 kb on + strand at 3758.671 kb on + strand at 3758.767 kb on - strand at 3758.876 kb on - strand, within OHPLBJKB_03584 at 3758.876 kb on - strand, within OHPLBJKB_03584 at 3758.882 kb on + strand, within OHPLBJKB_03584 at 3759.000 kb on - strand, within OHPLBJKB_03584 at 3759.046 kb on - strand, within OHPLBJKB_03584 at 3759.060 kb on - strand, within OHPLBJKB_03584 at 3759.089 kb on - strand, within OHPLBJKB_03584 at 3759.089 kb on - strand, within OHPLBJKB_03584 at 3759.181 kb on + strand, within OHPLBJKB_03584 at 3759.181 kb on + strand, within OHPLBJKB_03584 at 3759.181 kb on + strand, within OHPLBJKB_03584 at 3759.181 kb on + strand, within OHPLBJKB_03584 at 3759.181 kb on + strand, within OHPLBJKB_03584 at 3759.210 kb on + strand, within OHPLBJKB_03584 at 3759.220 kb on + strand, within OHPLBJKB_03584 at 3759.248 kb on - strand, within OHPLBJKB_03584 at 3759.248 kb on - strand, within OHPLBJKB_03584 at 3759.248 kb on - strand, within OHPLBJKB_03584 at 3759.248 kb on - strand, within OHPLBJKB_03584 at 3759.271 kb on - strand, within OHPLBJKB_03584 at 3759.359 kb on + strand, within OHPLBJKB_03584 at 3759.417 kb on + strand, within OHPLBJKB_03584 at 3759.418 kb on - strand, within OHPLBJKB_03584 at 3759.418 kb on - strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.421 kb on + strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.422 kb on - strand, within OHPLBJKB_03584 at 3759.586 kb on + strand, within OHPLBJKB_03584 at 3759.737 kb on + strand at 3759.737 kb on + strand at 3759.738 kb on - strand at 3759.738 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 3,756,198 + OHPLBJKB_03582 0.85 -2.0 3,756,199 - OHPLBJKB_03582 0.85 +0.9 3,756,199 - OHPLBJKB_03582 0.85 -0.9 3,756,262 + -1.2 3,756,263 - -1.5 3,756,263 - +0.6 3,756,263 - +0.5 3,756,298 + -0.7 3,756,329 - +1.3 3,756,339 + +0.8 3,756,343 + -0.0 3,756,343 + -0.2 3,756,343 + +0.2 3,756,344 - -0.4 3,756,344 - -1.3 3,756,361 + -1.5 3,756,361 + +1.5 3,756,362 - -0.5 3,756,424 - -1.2 3,756,573 + +1.4 3,756,836 - -1.0 3,756,857 - +0.7 3,756,879 + +0.6 3,756,880 - -0.6 3,756,880 - +1.1 3,756,998 - +0.4 3,756,998 - -1.2 3,757,027 + -0.2 3,757,028 - +0.3 3,757,028 - +0.8 3,757,028 - -0.7 3,757,028 - -0.8 3,757,030 + -0.7 3,757,030 + -0.1 3,757,031 - +0.8 3,757,033 + +0.0 3,757,033 + -0.3 3,757,034 - -0.1 3,757,037 - -0.1 3,757,037 - -2.1 3,757,083 + -2.5 3,757,084 - -0.5 3,757,156 - +0.3 3,757,195 + +0.5 3,757,233 + -0.1 3,757,288 + -1.8 3,757,289 - -0.3 3,757,386 + OHPLBJKB_03583 0.13 +0.1 3,757,386 + OHPLBJKB_03583 0.13 +0.4 3,757,386 + OHPLBJKB_03583 0.13 +0.4 3,757,387 - OHPLBJKB_03583 0.13 -1.5 3,757,387 - OHPLBJKB_03583 0.13 -0.5 3,757,387 - OHPLBJKB_03583 0.13 -1.2 3,757,387 - OHPLBJKB_03583 0.13 -0.5 3,757,387 - OHPLBJKB_03583 0.13 -0.1 3,757,463 - OHPLBJKB_03583 0.18 -0.6 3,757,468 + OHPLBJKB_03583 0.18 +0.1 3,757,469 - OHPLBJKB_03583 0.19 +0.2 3,757,469 - OHPLBJKB_03583 0.19 +0.9 3,757,475 - OHPLBJKB_03583 0.19 -0.1 3,757,543 + OHPLBJKB_03583 0.23 +0.3 3,757,544 - OHPLBJKB_03583 0.23 -0.7 3,757,547 + OHPLBJKB_03583 0.23 -2.7 3,757,547 + OHPLBJKB_03583 0.23 +0.2 3,757,547 + OHPLBJKB_03583 0.23 +0.6 3,757,547 + OHPLBJKB_03583 0.23 +1.0 3,757,547 + OHPLBJKB_03583 0.23 -0.2 3,757,547 + OHPLBJKB_03583 0.23 -0.1 3,757,547 + OHPLBJKB_03583 0.23 -0.9 3,757,548 - OHPLBJKB_03583 0.24 -1.3 3,757,548 - OHPLBJKB_03583 0.24 -0.7 3,757,548 - OHPLBJKB_03583 0.24 -0.5 3,757,548 - OHPLBJKB_03583 0.24 -0.3 3,757,548 - OHPLBJKB_03583 0.24 +0.7 3,757,548 - OHPLBJKB_03583 0.24 +1.0 3,757,548 - OHPLBJKB_03583 0.24 -1.4 3,757,548 - OHPLBJKB_03583 0.24 -1.8 3,757,548 - OHPLBJKB_03583 0.24 -0.6 3,757,548 - OHPLBJKB_03583 0.24 -1.7 3,757,548 - OHPLBJKB_03583 0.24 -0.5 3,757,548 - OHPLBJKB_03583 0.24 -0.6 3,757,548 - OHPLBJKB_03583 0.24 +0.3 3,757,548 - OHPLBJKB_03583 0.24 -0.8 3,757,548 - OHPLBJKB_03583 0.24 -2.2 3,757,548 - OHPLBJKB_03583 0.24 +0.5 3,757,549 + OHPLBJKB_03583 0.24 -0.2 3,757,567 + OHPLBJKB_03583 0.25 -0.1 3,757,612 + OHPLBJKB_03583 0.28 +0.1 3,757,749 + OHPLBJKB_03583 0.36 -0.9 3,757,771 + OHPLBJKB_03583 0.38 +0.3 3,757,771 + OHPLBJKB_03583 0.38 -1.1 3,757,772 - OHPLBJKB_03583 0.38 -2.0 3,757,780 - OHPLBJKB_03583 0.38 +1.4 3,757,783 + OHPLBJKB_03583 0.38 -0.5 3,757,783 + OHPLBJKB_03583 0.38 +0.5 3,757,784 - OHPLBJKB_03583 0.39 +1.5 3,757,830 + OHPLBJKB_03583 0.41 -0.2 3,757,830 + OHPLBJKB_03583 0.41 -0.3 3,757,831 - OHPLBJKB_03583 0.42 -0.0 3,757,931 - OHPLBJKB_03583 0.48 +0.3 3,757,974 + OHPLBJKB_03583 0.51 -0.0 3,757,992 + OHPLBJKB_03583 0.52 -0.0 3,757,993 - OHPLBJKB_03583 0.52 -0.7 3,757,993 - OHPLBJKB_03583 0.52 -1.8 3,757,993 - OHPLBJKB_03583 0.52 -2.0 3,758,008 + OHPLBJKB_03583 0.53 +0.6 3,758,009 - OHPLBJKB_03583 0.53 -0.6 3,758,108 + OHPLBJKB_03583 0.59 -0.7 3,758,132 - OHPLBJKB_03583 0.61 -1.5 3,758,214 - OHPLBJKB_03583 0.66 +0.3 3,758,215 + OHPLBJKB_03583 0.66 -1.0 3,758,230 + OHPLBJKB_03583 0.67 -0.2 3,758,246 + OHPLBJKB_03583 0.68 +0.9 3,758,486 - OHPLBJKB_03583 0.83 -0.4 3,758,501 + OHPLBJKB_03583 0.84 -0.1 3,758,501 + OHPLBJKB_03583 0.84 +1.3 3,758,501 + OHPLBJKB_03583 0.84 +0.9 3,758,502 - OHPLBJKB_03583 0.84 -1.4 3,758,502 - OHPLBJKB_03583 0.84 -0.3 3,758,503 + OHPLBJKB_03583 0.84 -0.4 3,758,504 - OHPLBJKB_03583 0.84 +0.5 3,758,523 - OHPLBJKB_03583 0.86 -0.1 3,758,586 - OHPLBJKB_03583 0.90 -0.0 3,758,586 - OHPLBJKB_03583 0.90 +0.4 3,758,586 - OHPLBJKB_03583 0.90 +0.6 3,758,586 - OHPLBJKB_03583 0.90 +1.2 3,758,662 - -1.1 3,758,662 - -0.6 3,758,671 + -0.6 3,758,671 + -1.4 3,758,767 - +0.0 3,758,876 - OHPLBJKB_03584 0.12 -1.8 3,758,876 - OHPLBJKB_03584 0.12 -0.3 3,758,882 + OHPLBJKB_03584 0.12 -1.5 3,759,000 - OHPLBJKB_03584 0.23 +0.0 3,759,046 - OHPLBJKB_03584 0.27 +1.2 3,759,060 - OHPLBJKB_03584 0.28 -0.3 3,759,089 - OHPLBJKB_03584 0.31 +1.3 3,759,089 - OHPLBJKB_03584 0.31 -0.5 3,759,181 + OHPLBJKB_03584 0.40 -1.5 3,759,181 + OHPLBJKB_03584 0.40 -0.1 3,759,181 + OHPLBJKB_03584 0.40 -1.1 3,759,181 + OHPLBJKB_03584 0.40 -0.8 3,759,181 + OHPLBJKB_03584 0.40 +0.7 3,759,210 + OHPLBJKB_03584 0.42 +0.5 3,759,220 + OHPLBJKB_03584 0.43 -0.1 3,759,248 - OHPLBJKB_03584 0.46 +1.7 3,759,248 - OHPLBJKB_03584 0.46 -0.2 3,759,248 - OHPLBJKB_03584 0.46 -1.1 3,759,248 - OHPLBJKB_03584 0.46 +2.1 3,759,271 - OHPLBJKB_03584 0.48 -0.1 3,759,359 + OHPLBJKB_03584 0.56 +0.3 3,759,417 + OHPLBJKB_03584 0.61 +2.1 3,759,418 - OHPLBJKB_03584 0.61 -1.5 3,759,418 - OHPLBJKB_03584 0.61 -0.6 3,759,421 + OHPLBJKB_03584 0.62 -0.7 3,759,421 + OHPLBJKB_03584 0.62 -1.0 3,759,421 + OHPLBJKB_03584 0.62 +0.5 3,759,421 + OHPLBJKB_03584 0.62 +0.8 3,759,421 + OHPLBJKB_03584 0.62 +0.7 3,759,421 + OHPLBJKB_03584 0.62 +0.4 3,759,421 + OHPLBJKB_03584 0.62 +1.3 3,759,421 + OHPLBJKB_03584 0.62 -0.4 3,759,422 - OHPLBJKB_03584 0.62 -0.8 3,759,422 - OHPLBJKB_03584 0.62 +0.1 3,759,422 - OHPLBJKB_03584 0.62 +1.5 3,759,422 - OHPLBJKB_03584 0.62 -0.5 3,759,422 - OHPLBJKB_03584 0.62 -1.4 3,759,422 - OHPLBJKB_03584 0.62 -1.0 3,759,422 - OHPLBJKB_03584 0.62 +0.1 3,759,422 - OHPLBJKB_03584 0.62 +0.1 3,759,586 + OHPLBJKB_03584 0.77 -1.1 3,759,737 + -0.6 3,759,737 + +0.1 3,759,738 - -0.3 3,759,738 - -0.0
Or see this region's nucleotide sequence