Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03121

Experiment: K5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_03120 and OHPLBJKB_03121 overlap by 4 nucleotidesOHPLBJKB_03121 and OHPLBJKB_03122 are separated by 2 nucleotides OHPLBJKB_03120: OHPLBJKB_03120 - Enterobactin synthase component F, at 3,248,519 to 3,252,400 _03120 OHPLBJKB_03121: OHPLBJKB_03121 - Enterobactin biosynthesis protein YbdZ, at 3,252,397 to 3,252,615 _03121 OHPLBJKB_03122: OHPLBJKB_03122 - Enterochelin esterase, at 3,252,618 to 3,253,820 _03122 Position (kb) 3252 3253Strain fitness (log2 ratio) -2 -1 0 1at 3251.503 kb on + strand, within OHPLBJKB_03120at 3251.581 kb on + strand, within OHPLBJKB_03120at 3251.582 kb on - strand, within OHPLBJKB_03120at 3251.596 kb on - strand, within OHPLBJKB_03120at 3251.859 kb on + strand, within OHPLBJKB_03120at 3251.870 kb on + strand, within OHPLBJKB_03120at 3251.871 kb on - strand, within OHPLBJKB_03120at 3251.931 kb on + strand, within OHPLBJKB_03120at 3252.232 kb on + strandat 3252.233 kb on - strandat 3252.306 kb on + strandat 3252.307 kb on - strandat 3252.307 kb on - strandat 3252.568 kb on + strand, within OHPLBJKB_03121at 3252.568 kb on + strand, within OHPLBJKB_03121at 3252.569 kb on - strand, within OHPLBJKB_03121at 3252.572 kb on + strand, within OHPLBJKB_03121at 3252.572 kb on + strand, within OHPLBJKB_03121at 3252.573 kb on - strand, within OHPLBJKB_03121at 3252.615 kb on + strandat 3252.745 kb on - strand, within OHPLBJKB_03122at 3252.754 kb on + strand, within OHPLBJKB_03122at 3252.754 kb on + strand, within OHPLBJKB_03122at 3252.858 kb on + strand, within OHPLBJKB_03122at 3252.918 kb on + strand, within OHPLBJKB_03122at 3252.955 kb on + strand, within OHPLBJKB_03122at 3253.028 kb on + strand, within OHPLBJKB_03122at 3253.028 kb on + strand, within OHPLBJKB_03122at 3253.044 kb on + strand, within OHPLBJKB_03122at 3253.135 kb on + strand, within OHPLBJKB_03122at 3253.135 kb on + strand, within OHPLBJKB_03122at 3253.135 kb on + strand, within OHPLBJKB_03122at 3253.135 kb on + strand, within OHPLBJKB_03122at 3253.135 kb on + strand, within OHPLBJKB_03122at 3253.196 kb on + strand, within OHPLBJKB_03122at 3253.197 kb on - strand, within OHPLBJKB_03122at 3253.464 kb on + strand, within OHPLBJKB_03122at 3253.464 kb on + strand, within OHPLBJKB_03122at 3253.464 kb on + strand, within OHPLBJKB_03122at 3253.464 kb on + strand, within OHPLBJKB_03122at 3253.541 kb on + strand, within OHPLBJKB_03122

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Per-strain Table

Position Strand Gene LocusTag Fraction K5
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3,251,503 + OHPLBJKB_03120 0.77 +0.1
3,251,581 + OHPLBJKB_03120 0.79 -0.6
3,251,582 - OHPLBJKB_03120 0.79 +0.0
3,251,596 - OHPLBJKB_03120 0.79 -0.6
3,251,859 + OHPLBJKB_03120 0.86 -1.2
3,251,870 + OHPLBJKB_03120 0.86 -1.4
3,251,871 - OHPLBJKB_03120 0.86 -1.2
3,251,931 + OHPLBJKB_03120 0.88 -0.3
3,252,232 + +1.1
3,252,233 - -1.8
3,252,306 + +0.9
3,252,307 - -1.8
3,252,307 - +0.2
3,252,568 + OHPLBJKB_03121 0.78 -0.0
3,252,568 + OHPLBJKB_03121 0.78 +0.3
3,252,569 - OHPLBJKB_03121 0.79 -0.3
3,252,572 + OHPLBJKB_03121 0.80 +0.0
3,252,572 + OHPLBJKB_03121 0.80 -0.9
3,252,573 - OHPLBJKB_03121 0.80 +0.9
3,252,615 + -0.5
3,252,745 - OHPLBJKB_03122 0.11 +1.0
3,252,754 + OHPLBJKB_03122 0.11 +0.2
3,252,754 + OHPLBJKB_03122 0.11 +0.4
3,252,858 + OHPLBJKB_03122 0.20 -0.2
3,252,918 + OHPLBJKB_03122 0.25 +1.4
3,252,955 + OHPLBJKB_03122 0.28 +0.7
3,253,028 + OHPLBJKB_03122 0.34 -0.3
3,253,028 + OHPLBJKB_03122 0.34 -0.4
3,253,044 + OHPLBJKB_03122 0.35 -1.7
3,253,135 + OHPLBJKB_03122 0.43 -0.6
3,253,135 + OHPLBJKB_03122 0.43 -0.3
3,253,135 + OHPLBJKB_03122 0.43 +0.3
3,253,135 + OHPLBJKB_03122 0.43 -0.1
3,253,135 + OHPLBJKB_03122 0.43 -0.3
3,253,196 + OHPLBJKB_03122 0.48 +0.4
3,253,197 - OHPLBJKB_03122 0.48 +0.4
3,253,464 + OHPLBJKB_03122 0.70 +1.0
3,253,464 + OHPLBJKB_03122 0.70 +1.0
3,253,464 + OHPLBJKB_03122 0.70 +1.0
3,253,464 + OHPLBJKB_03122 0.70 -0.8
3,253,541 + OHPLBJKB_03122 0.77 +0.0

Or see this region's nucleotide sequence