Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03116 and OHPLBJKB_03117 overlap by 4 nucleotides OHPLBJKB_03117 and OHPLBJKB_03118 overlap by 4 nucleotides OHPLBJKB_03118 and OHPLBJKB_03119 overlap by 4 nucleotides
OHPLBJKB_03116: OHPLBJKB_03116 - Ferric enterobactin transport system permease protein FepD, at 3,244,368 to 3,245,372
_03116
OHPLBJKB_03117: OHPLBJKB_03117 - Ferric enterobactin transport system permease protein FepG, at 3,245,369 to 3,246,361
_03117
OHPLBJKB_03118: OHPLBJKB_03118 - Ferric enterobactin transport ATP-binding protein FepC, at 3,246,358 to 3,247,173
_03118
OHPLBJKB_03119: OHPLBJKB_03119 - Ferric enterobactin transport protein FepE, at 3,247,170 to 3,248,303
_03119
Position (kb)
3246
3247
3248 Strain fitness (log2 ratio)
-1
0
1
2 at 3245.375 kb on + strand at 3245.376 kb on - strand at 3245.438 kb on - strand at 3245.647 kb on - strand, within OHPLBJKB_03117 at 3245.852 kb on - strand, within OHPLBJKB_03117 at 3245.855 kb on - strand, within OHPLBJKB_03117 at 3245.968 kb on + strand, within OHPLBJKB_03117 at 3245.968 kb on + strand, within OHPLBJKB_03117 at 3245.968 kb on + strand, within OHPLBJKB_03117 at 3245.968 kb on + strand, within OHPLBJKB_03117 at 3245.968 kb on + strand, within OHPLBJKB_03117 at 3245.969 kb on - strand, within OHPLBJKB_03117 at 3245.969 kb on - strand, within OHPLBJKB_03117 at 3245.969 kb on - strand, within OHPLBJKB_03117 at 3245.969 kb on - strand, within OHPLBJKB_03117 at 3245.969 kb on - strand, within OHPLBJKB_03117 at 3245.970 kb on + strand, within OHPLBJKB_03117 at 3245.970 kb on + strand, within OHPLBJKB_03117 at 3245.971 kb on - strand, within OHPLBJKB_03117 at 3245.971 kb on - strand, within OHPLBJKB_03117 at 3246.078 kb on + strand, within OHPLBJKB_03117 at 3246.320 kb on + strand at 3246.321 kb on - strand at 3246.396 kb on - strand at 3246.415 kb on + strand at 3246.415 kb on + strand at 3246.416 kb on - strand at 3246.416 kb on - strand at 3246.416 kb on - strand at 3246.416 kb on - strand at 3246.416 kb on - strand at 3246.416 kb on - strand at 3246.418 kb on - strand at 3246.441 kb on - strand, within OHPLBJKB_03118 at 3246.756 kb on - strand, within OHPLBJKB_03118 at 3246.849 kb on + strand, within OHPLBJKB_03118 at 3246.850 kb on - strand, within OHPLBJKB_03118 at 3246.850 kb on - strand, within OHPLBJKB_03118 at 3246.850 kb on - strand, within OHPLBJKB_03118 at 3246.915 kb on - strand, within OHPLBJKB_03118 at 3247.171 kb on + strand at 3247.176 kb on + strand at 3247.176 kb on + strand at 3247.177 kb on - strand at 3247.283 kb on + strand at 3247.721 kb on + strand, within OHPLBJKB_03119 at 3247.721 kb on + strand, within OHPLBJKB_03119 at 3247.722 kb on - strand, within OHPLBJKB_03119 at 3247.724 kb on - strand, within OHPLBJKB_03119 at 3247.733 kb on - strand, within OHPLBJKB_03119 at 3247.796 kb on + strand, within OHPLBJKB_03119 at 3247.797 kb on - strand, within OHPLBJKB_03119 at 3247.798 kb on + strand, within OHPLBJKB_03119 at 3247.798 kb on + strand, within OHPLBJKB_03119 at 3247.798 kb on + strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.799 kb on - strand, within OHPLBJKB_03119 at 3247.824 kb on - strand, within OHPLBJKB_03119 at 3247.927 kb on + strand, within OHPLBJKB_03119 at 3247.927 kb on + strand, within OHPLBJKB_03119 at 3247.928 kb on - strand, within OHPLBJKB_03119 at 3247.928 kb on - strand, within OHPLBJKB_03119 at 3247.928 kb on - strand, within OHPLBJKB_03119 at 3247.928 kb on - strand, within OHPLBJKB_03119 at 3247.928 kb on - strand, within OHPLBJKB_03119 at 3247.928 kb on - strand, within OHPLBJKB_03119 at 3247.945 kb on + strand, within OHPLBJKB_03119 at 3248.042 kb on + strand, within OHPLBJKB_03119 at 3248.042 kb on + strand, within OHPLBJKB_03119 at 3248.043 kb on - strand, within OHPLBJKB_03119
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 3,245,375 + -0.6 3,245,376 - +0.0 3,245,438 - -1.3 3,245,647 - OHPLBJKB_03117 0.28 -0.6 3,245,852 - OHPLBJKB_03117 0.49 +0.4 3,245,855 - OHPLBJKB_03117 0.49 -0.6 3,245,968 + OHPLBJKB_03117 0.60 +2.0 3,245,968 + OHPLBJKB_03117 0.60 -0.3 3,245,968 + OHPLBJKB_03117 0.60 -0.4 3,245,968 + OHPLBJKB_03117 0.60 -1.0 3,245,968 + OHPLBJKB_03117 0.60 +0.4 3,245,969 - OHPLBJKB_03117 0.60 +1.4 3,245,969 - OHPLBJKB_03117 0.60 +0.4 3,245,969 - OHPLBJKB_03117 0.60 +0.0 3,245,969 - OHPLBJKB_03117 0.60 -0.3 3,245,969 - OHPLBJKB_03117 0.60 +0.4 3,245,970 + OHPLBJKB_03117 0.61 +0.2 3,245,970 + OHPLBJKB_03117 0.61 -0.3 3,245,971 - OHPLBJKB_03117 0.61 +2.0 3,245,971 - OHPLBJKB_03117 0.61 +1.0 3,246,078 + OHPLBJKB_03117 0.71 +0.2 3,246,320 + +1.4 3,246,321 - -0.8 3,246,396 - -0.6 3,246,415 + +0.4 3,246,415 + +0.4 3,246,416 - -0.3 3,246,416 - -0.3 3,246,416 - +2.0 3,246,416 - -0.6 3,246,416 - -0.8 3,246,416 - +2.0 3,246,418 - +0.4 3,246,441 - OHPLBJKB_03118 0.10 +0.0 3,246,756 - OHPLBJKB_03118 0.49 +0.2 3,246,849 + OHPLBJKB_03118 0.60 +2.0 3,246,850 - OHPLBJKB_03118 0.60 -0.3 3,246,850 - OHPLBJKB_03118 0.60 +0.4 3,246,850 - OHPLBJKB_03118 0.60 -1.3 3,246,915 - OHPLBJKB_03118 0.68 -1.0 3,247,171 + -1.0 3,247,176 + +0.5 3,247,176 + -0.6 3,247,177 - -1.4 3,247,283 + +1.0 3,247,721 + OHPLBJKB_03119 0.49 -0.9 3,247,721 + OHPLBJKB_03119 0.49 -0.6 3,247,722 - OHPLBJKB_03119 0.49 -0.1 3,247,724 - OHPLBJKB_03119 0.49 +1.0 3,247,733 - OHPLBJKB_03119 0.50 -0.1 3,247,796 + OHPLBJKB_03119 0.55 +0.0 3,247,797 - OHPLBJKB_03119 0.55 -0.2 3,247,798 + OHPLBJKB_03119 0.55 -1.2 3,247,798 + OHPLBJKB_03119 0.55 +0.2 3,247,798 + OHPLBJKB_03119 0.55 -0.2 3,247,799 - OHPLBJKB_03119 0.55 +0.7 3,247,799 - OHPLBJKB_03119 0.55 -0.6 3,247,799 - OHPLBJKB_03119 0.55 -0.6 3,247,799 - OHPLBJKB_03119 0.55 -1.3 3,247,799 - OHPLBJKB_03119 0.55 +0.4 3,247,799 - OHPLBJKB_03119 0.55 +0.3 3,247,799 - OHPLBJKB_03119 0.55 -1.1 3,247,799 - OHPLBJKB_03119 0.55 -0.8 3,247,799 - OHPLBJKB_03119 0.55 -0.5 3,247,824 - OHPLBJKB_03119 0.58 -0.8 3,247,927 + OHPLBJKB_03119 0.67 +0.5 3,247,927 + OHPLBJKB_03119 0.67 +0.8 3,247,928 - OHPLBJKB_03119 0.67 +0.9 3,247,928 - OHPLBJKB_03119 0.67 -1.6 3,247,928 - OHPLBJKB_03119 0.67 -1.4 3,247,928 - OHPLBJKB_03119 0.67 +0.7 3,247,928 - OHPLBJKB_03119 0.67 +1.4 3,247,928 - OHPLBJKB_03119 0.67 +0.1 3,247,945 + OHPLBJKB_03119 0.68 -0.7 3,248,042 + OHPLBJKB_03119 0.77 +0.0 3,248,042 + OHPLBJKB_03119 0.77 -0.4 3,248,043 - OHPLBJKB_03119 0.77 +0.4
Or see this region's nucleotide sequence