Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03100

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,226,105	+		OHPLBJKB_03099	0.54	-0.7
3,226,106	-		OHPLBJKB_03099	0.54	-0.8
3,226,117	-		OHPLBJKB_03099	0.55	-0.8
3,226,157	+		OHPLBJKB_03099	0.58	+0.6
3,226,157	+		OHPLBJKB_03099	0.58	-0.7
3,226,157	+		OHPLBJKB_03099	0.58	+1.2
3,226,158	-		OHPLBJKB_03099	0.58	+0.8
3,226,158	-		OHPLBJKB_03099	0.58	+0.1
3,226,158	-		OHPLBJKB_03099	0.58	-0.4
3,226,160	+		OHPLBJKB_03099	0.58	+0.2
3,226,160	+		OHPLBJKB_03099	0.58	-0.6
3,226,160	+		OHPLBJKB_03099	0.58	-1.0
3,226,161	-		OHPLBJKB_03099	0.58	+0.9
3,226,161	-		OHPLBJKB_03099	0.58	-1.9
3,226,168	-		OHPLBJKB_03099	0.58	-0.6
3,226,278	-		OHPLBJKB_03099	0.65	+0.7
3,226,373	+		OHPLBJKB_03099	0.71	+0.4
3,226,373	+		OHPLBJKB_03099	0.71	+1.0
3,226,434	+		OHPLBJKB_03099	0.75	+0.4
3,226,435	-		OHPLBJKB_03099	0.75	-1.1
3,226,462	+		OHPLBJKB_03099	0.77	+0.4
3,226,639	+		OHPLBJKB_03099	0.88	-0.3
3,226,712	-				-0.3
3,226,768	-				+0.9
3,226,768	-				-1.2
3,226,768	-				-0.9
3,226,768	-				-1.0
3,226,768	-				+2.0
3,226,768	-				+0.3
3,226,809	-				-0.2
3,226,918	-				-1.1
3,226,918	-				-0.9
3,226,934	+				-0.0
3,226,934	+				-0.4
3,226,934	+				+0.6
3,226,981	+				+1.0
3,226,989	+				+0.2
3,226,989	+				-1.5
3,226,990	-				-0.3
3,227,140	-		OHPLBJKB_03100	0.16	-0.2
3,227,140	-		OHPLBJKB_03100	0.16	+0.4
3,227,140	-		OHPLBJKB_03100	0.16	+0.4
3,227,143	+		OHPLBJKB_03100	0.17	-0.6
3,227,397	-		OHPLBJKB_03100	0.62	-1.8
3,227,410	-		OHPLBJKB_03100	0.64	-1.4
3,227,410	-		OHPLBJKB_03100	0.64	-0.6
3,227,416	-		OHPLBJKB_03100	0.65	-0.7
3,227,484	-		OHPLBJKB_03100	0.77	-0.5
3,227,615	-				-0.4
3,227,615	-				-1.3
3,227,615	-				+0.7
3,227,615	-				+0.7
3,227,615	-				+0.2
3,227,615	-				+0.4
3,227,615	-				-0.0
3,227,615	-				+0.1
3,227,616	+				+0.7
3,227,617	-				+0.5
3,227,643	+				+1.7
3,227,643	+				+0.5
3,227,643	+				+0.4
3,227,643	+				-2.0
3,227,644	-				+0.4
3,227,644	-				+0.1
3,227,644	-				-1.9
3,227,644	-				-2.1
3,227,709	-				-1.5
3,227,709	-				-0.7
3,227,709	-				+0.9
3,227,719	+				-0.0
3,227,719	+				-0.7
3,227,793	-				+1.0
3,227,802	+				+1.7
3,227,802	+				+1.0
3,227,803	-				-0.7
3,227,803	-				-1.3
3,227,812	+				-1.2
3,227,812	+				+0.8
3,227,911	+				-0.0
3,227,912	-				-0.2
3,227,919	+				-1.0
3,227,919	+				-0.5
3,227,924	-				-2.9
3,227,924	-				+0.9
3,227,934	+				+0.6
3,227,935	-				-0.2
3,228,079	+		OHPLBJKB_03101	0.13	+0.5
3,228,122	+		OHPLBJKB_03101	0.18	+0.4
3,228,122	+		OHPLBJKB_03101	0.18	+0.1
3,228,134	+		OHPLBJKB_03101	0.20	+0.4
3,228,158	+		OHPLBJKB_03101	0.23	+1.0
3,228,159	-		OHPLBJKB_03101	0.23	+0.3
3,228,159	-		OHPLBJKB_03101	0.23	+0.1
3,228,175	+		OHPLBJKB_03101	0.26	-1.5
3,228,175	+		OHPLBJKB_03101	0.26	-0.7
3,228,194	+		OHPLBJKB_03101	0.28	-1.0
3,228,200	+		OHPLBJKB_03101	0.29	+0.3
3,228,201	-		OHPLBJKB_03101	0.29	+0.9
3,228,201	-		OHPLBJKB_03101	0.29	+0.1
3,228,201	-		OHPLBJKB_03101	0.29	-0.8
3,228,251	+		OHPLBJKB_03101	0.36	-0.9
3,228,338	+		OHPLBJKB_03101	0.47	-0.0
3,228,338	+		OHPLBJKB_03101	0.47	+0.3
3,228,365	+		OHPLBJKB_03101	0.51	+0.3
3,228,370	+		OHPLBJKB_03101	0.52	+0.8
3,228,371	-		OHPLBJKB_03101	0.52	-0.3
3,228,371	-		OHPLBJKB_03101	0.52	+0.7
3,228,371	-		OHPLBJKB_03101	0.52	-0.9
3,228,371	-		OHPLBJKB_03101	0.52	-0.4
3,228,402	+		OHPLBJKB_03101	0.56	-0.0
3,228,423	+		OHPLBJKB_03101	0.59	-0.0
3,228,424	-		OHPLBJKB_03101	0.59	+1.2
3,228,424	-		OHPLBJKB_03101	0.59	-0.5
3,228,424	-		OHPLBJKB_03101	0.59	-0.1
3,228,542	-		OHPLBJKB_03101	0.75	-1.6
3,228,542	-		OHPLBJKB_03101	0.75	+0.7
3,228,546	+		OHPLBJKB_03101	0.75	-1.0
3,228,547	-		OHPLBJKB_03101	0.75	-0.0
3,228,564	+		OHPLBJKB_03101	0.78	-0.7
3,228,568	+		OHPLBJKB_03101	0.78	+0.3
3,228,569	-		OHPLBJKB_03101	0.78	+1.2
3,228,589	-		OHPLBJKB_03101	0.81	+0.1