Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_02794

Experiment: K5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_02793 and OHPLBJKB_02794 are separated by 494 nucleotidesOHPLBJKB_02794 and OHPLBJKB_02795 are separated by 143 nucleotides OHPLBJKB_02793: OHPLBJKB_02793 - Aquaporin Z, at 2,926,357 to 2,927,052 _02793 OHPLBJKB_02794: OHPLBJKB_02794 - Lysine exporter LysO, at 2,927,547 to 2,928,446 _02794 OHPLBJKB_02795: OHPLBJKB_02795 - Hydroxylamine reductase, at 2,928,590 to 2,930,242 _02795 Position (kb) 2927 2928 2929Strain fitness (log2 ratio) -2 -1 0 1at 2926.566 kb on - strand, within OHPLBJKB_02793at 2926.607 kb on - strand, within OHPLBJKB_02793at 2926.610 kb on + strand, within OHPLBJKB_02793at 2926.610 kb on + strand, within OHPLBJKB_02793at 2926.610 kb on + strand, within OHPLBJKB_02793at 2926.611 kb on - strand, within OHPLBJKB_02793at 2926.611 kb on - strand, within OHPLBJKB_02793at 2926.611 kb on - strand, within OHPLBJKB_02793at 2926.654 kb on + strand, within OHPLBJKB_02793at 2926.655 kb on - strand, within OHPLBJKB_02793at 2926.655 kb on - strand, within OHPLBJKB_02793at 2926.658 kb on + strand, within OHPLBJKB_02793at 2926.659 kb on - strand, within OHPLBJKB_02793at 2926.742 kb on - strand, within OHPLBJKB_02793at 2926.763 kb on + strand, within OHPLBJKB_02793at 2926.764 kb on - strand, within OHPLBJKB_02793at 2926.775 kb on + strand, within OHPLBJKB_02793at 2926.880 kb on + strand, within OHPLBJKB_02793at 2926.880 kb on + strand, within OHPLBJKB_02793at 2926.880 kb on + strand, within OHPLBJKB_02793at 2926.888 kb on - strand, within OHPLBJKB_02793at 2926.888 kb on - strand, within OHPLBJKB_02793at 2926.961 kb on + strand, within OHPLBJKB_02793at 2927.102 kb on + strandat 2927.102 kb on + strandat 2927.103 kb on - strandat 2927.104 kb on + strandat 2927.104 kb on + strandat 2927.104 kb on + strandat 2927.105 kb on - strandat 2927.105 kb on - strandat 2927.105 kb on - strandat 2927.105 kb on - strandat 2927.105 kb on - strandat 2927.105 kb on - strandat 2927.144 kb on - strandat 2927.144 kb on - strandat 2927.144 kb on - strandat 2927.152 kb on + strandat 2927.152 kb on + strandat 2927.152 kb on + strandat 2927.153 kb on - strandat 2927.153 kb on - strandat 2927.394 kb on - strandat 2927.398 kb on - strandat 2927.398 kb on - strandat 2927.410 kb on + strandat 2927.416 kb on + strandat 2927.431 kb on - strandat 2927.436 kb on - strandat 2927.452 kb on - strandat 2927.476 kb on + strandat 2927.631 kb on - strandat 2927.644 kb on + strand, within OHPLBJKB_02794at 2927.658 kb on + strand, within OHPLBJKB_02794at 2927.659 kb on - strand, within OHPLBJKB_02794at 2927.664 kb on - strand, within OHPLBJKB_02794at 2927.750 kb on + strand, within OHPLBJKB_02794at 2927.750 kb on + strand, within OHPLBJKB_02794at 2927.750 kb on + strand, within OHPLBJKB_02794at 2927.754 kb on - strand, within OHPLBJKB_02794at 2927.764 kb on + strand, within OHPLBJKB_02794at 2927.768 kb on - strand, within OHPLBJKB_02794at 2927.771 kb on + strand, within OHPLBJKB_02794at 2927.771 kb on + strand, within OHPLBJKB_02794at 2927.771 kb on + strand, within OHPLBJKB_02794at 2927.771 kb on + strand, within OHPLBJKB_02794at 2927.772 kb on - strand, within OHPLBJKB_02794at 2927.772 kb on - strand, within OHPLBJKB_02794at 2927.772 kb on - strand, within OHPLBJKB_02794at 2927.775 kb on - strand, within OHPLBJKB_02794at 2927.873 kb on - strand, within OHPLBJKB_02794at 2927.887 kb on + strand, within OHPLBJKB_02794at 2927.888 kb on - strand, within OHPLBJKB_02794at 2927.888 kb on - strand, within OHPLBJKB_02794at 2927.891 kb on - strand, within OHPLBJKB_02794at 2927.891 kb on - strand, within OHPLBJKB_02794at 2927.932 kb on + strand, within OHPLBJKB_02794at 2927.974 kb on + strand, within OHPLBJKB_02794at 2928.006 kb on - strand, within OHPLBJKB_02794at 2928.036 kb on - strand, within OHPLBJKB_02794at 2928.082 kb on + strand, within OHPLBJKB_02794at 2928.095 kb on - strand, within OHPLBJKB_02794at 2928.095 kb on - strand, within OHPLBJKB_02794at 2928.107 kb on + strand, within OHPLBJKB_02794at 2928.108 kb on - strand, within OHPLBJKB_02794at 2928.128 kb on + strand, within OHPLBJKB_02794at 2928.162 kb on + strand, within OHPLBJKB_02794at 2928.162 kb on + strand, within OHPLBJKB_02794at 2928.163 kb on - strand, within OHPLBJKB_02794at 2928.182 kb on - strand, within OHPLBJKB_02794at 2928.254 kb on + strand, within OHPLBJKB_02794at 2928.255 kb on - strand, within OHPLBJKB_02794at 2928.255 kb on - strand, within OHPLBJKB_02794at 2928.255 kb on - strand, within OHPLBJKB_02794at 2928.255 kb on - strand, within OHPLBJKB_02794at 2928.257 kb on + strand, within OHPLBJKB_02794at 2928.257 kb on + strand, within OHPLBJKB_02794at 2928.257 kb on + strand, within OHPLBJKB_02794at 2928.258 kb on - strand, within OHPLBJKB_02794at 2928.258 kb on - strand, within OHPLBJKB_02794at 2928.258 kb on - strand, within OHPLBJKB_02794at 2928.258 kb on - strand, within OHPLBJKB_02794at 2928.258 kb on - strand, within OHPLBJKB_02794at 2928.308 kb on - strand, within OHPLBJKB_02794at 2928.353 kb on + strand, within OHPLBJKB_02794at 2928.398 kb on + strandat 2928.412 kb on + strandat 2928.444 kb on + strandat 2928.445 kb on - strandat 2928.647 kb on + strandat 2928.648 kb on - strandat 2928.648 kb on - strandat 2928.668 kb on - strandat 2928.838 kb on + strand, within OHPLBJKB_02795at 2928.903 kb on + strand, within OHPLBJKB_02795at 2928.903 kb on + strand, within OHPLBJKB_02795at 2928.903 kb on + strand, within OHPLBJKB_02795at 2929.009 kb on + strand, within OHPLBJKB_02795at 2929.058 kb on + strand, within OHPLBJKB_02795at 2929.082 kb on + strand, within OHPLBJKB_02795at 2929.082 kb on + strand, within OHPLBJKB_02795at 2929.082 kb on + strand, within OHPLBJKB_02795at 2929.083 kb on - strand, within OHPLBJKB_02795at 2929.123 kb on + strand, within OHPLBJKB_02795at 2929.123 kb on + strand, within OHPLBJKB_02795at 2929.124 kb on - strand, within OHPLBJKB_02795at 2929.124 kb on - strand, within OHPLBJKB_02795at 2929.262 kb on - strand, within OHPLBJKB_02795at 2929.265 kb on + strand, within OHPLBJKB_02795at 2929.265 kb on + strand, within OHPLBJKB_02795at 2929.265 kb on + strand, within OHPLBJKB_02795at 2929.266 kb on - strand, within OHPLBJKB_02795at 2929.352 kb on + strand, within OHPLBJKB_02795at 2929.352 kb on + strand, within OHPLBJKB_02795at 2929.353 kb on - strand, within OHPLBJKB_02795

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Per-strain Table

Position Strand Gene LocusTag Fraction K5
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2,926,566 - OHPLBJKB_02793 0.30 +0.8
2,926,607 - OHPLBJKB_02793 0.36 +0.1
2,926,610 + OHPLBJKB_02793 0.36 -1.3
2,926,610 + OHPLBJKB_02793 0.36 +0.6
2,926,610 + OHPLBJKB_02793 0.36 +0.4
2,926,611 - OHPLBJKB_02793 0.36 -0.9
2,926,611 - OHPLBJKB_02793 0.36 -0.1
2,926,611 - OHPLBJKB_02793 0.36 +0.1
2,926,654 + OHPLBJKB_02793 0.43 -0.1
2,926,655 - OHPLBJKB_02793 0.43 -0.8
2,926,655 - OHPLBJKB_02793 0.43 -0.5
2,926,658 + OHPLBJKB_02793 0.43 +0.1
2,926,659 - OHPLBJKB_02793 0.43 -0.6
2,926,742 - OHPLBJKB_02793 0.55 -0.6
2,926,763 + OHPLBJKB_02793 0.58 +0.7
2,926,764 - OHPLBJKB_02793 0.58 +0.8
2,926,775 + OHPLBJKB_02793 0.60 -1.4
2,926,880 + OHPLBJKB_02793 0.75 +0.4
2,926,880 + OHPLBJKB_02793 0.75 +0.2
2,926,880 + OHPLBJKB_02793 0.75 +0.3
2,926,888 - OHPLBJKB_02793 0.76 -0.6
2,926,888 - OHPLBJKB_02793 0.76 +1.5
2,926,961 + OHPLBJKB_02793 0.87 -1.1
2,927,102 + -0.1
2,927,102 + +0.5
2,927,103 - +0.8
2,927,104 + -0.9
2,927,104 + +0.1
2,927,104 + +0.1
2,927,105 - -0.1
2,927,105 - +0.5
2,927,105 - +0.4
2,927,105 - -1.0
2,927,105 - -1.1
2,927,105 - +0.8
2,927,144 - -0.0
2,927,144 - +0.1
2,927,144 - +0.6
2,927,152 + -0.1
2,927,152 + +0.1
2,927,152 + -1.6
2,927,153 - -1.0
2,927,153 - -1.4
2,927,394 - +0.2
2,927,398 - -1.1
2,927,398 - -0.8
2,927,410 + +1.1
2,927,416 + -0.4
2,927,431 - +0.9
2,927,436 - -0.4
2,927,452 - +0.7
2,927,476 + +0.6
2,927,631 - +0.1
2,927,644 + OHPLBJKB_02794 0.11 +0.5
2,927,658 + OHPLBJKB_02794 0.12 +0.4
2,927,659 - OHPLBJKB_02794 0.12 -0.1
2,927,664 - OHPLBJKB_02794 0.13 -0.9
2,927,750 + OHPLBJKB_02794 0.23 -0.3
2,927,750 + OHPLBJKB_02794 0.23 -0.9
2,927,750 + OHPLBJKB_02794 0.23 -1.0
2,927,754 - OHPLBJKB_02794 0.23 -0.1
2,927,764 + OHPLBJKB_02794 0.24 -0.2
2,927,768 - OHPLBJKB_02794 0.25 -0.3
2,927,771 + OHPLBJKB_02794 0.25 -0.1
2,927,771 + OHPLBJKB_02794 0.25 +1.4
2,927,771 + OHPLBJKB_02794 0.25 -0.6
2,927,771 + OHPLBJKB_02794 0.25 -1.1
2,927,772 - OHPLBJKB_02794 0.25 +0.0
2,927,772 - OHPLBJKB_02794 0.25 -0.2
2,927,772 - OHPLBJKB_02794 0.25 -0.3
2,927,775 - OHPLBJKB_02794 0.25 +0.3
2,927,873 - OHPLBJKB_02794 0.36 -0.6
2,927,887 + OHPLBJKB_02794 0.38 -2.0
2,927,888 - OHPLBJKB_02794 0.38 -1.6
2,927,888 - OHPLBJKB_02794 0.38 +0.4
2,927,891 - OHPLBJKB_02794 0.38 -0.1
2,927,891 - OHPLBJKB_02794 0.38 -0.7
2,927,932 + OHPLBJKB_02794 0.43 +0.2
2,927,974 + OHPLBJKB_02794 0.47 +0.9
2,928,006 - OHPLBJKB_02794 0.51 -0.4
2,928,036 - OHPLBJKB_02794 0.54 +0.1
2,928,082 + OHPLBJKB_02794 0.59 +1.1
2,928,095 - OHPLBJKB_02794 0.61 +0.9
2,928,095 - OHPLBJKB_02794 0.61 -0.5
2,928,107 + OHPLBJKB_02794 0.62 -2.2
2,928,108 - OHPLBJKB_02794 0.62 -0.4
2,928,128 + OHPLBJKB_02794 0.65 +1.1
2,928,162 + OHPLBJKB_02794 0.68 -1.2
2,928,162 + OHPLBJKB_02794 0.68 -0.4
2,928,163 - OHPLBJKB_02794 0.68 -1.4
2,928,182 - OHPLBJKB_02794 0.71 -1.4
2,928,254 + OHPLBJKB_02794 0.79 -0.4
2,928,255 - OHPLBJKB_02794 0.79 +0.6
2,928,255 - OHPLBJKB_02794 0.79 +0.3
2,928,255 - OHPLBJKB_02794 0.79 -1.6
2,928,255 - OHPLBJKB_02794 0.79 +0.6
2,928,257 + OHPLBJKB_02794 0.79 -0.3
2,928,257 + OHPLBJKB_02794 0.79 -0.8
2,928,257 + OHPLBJKB_02794 0.79 -1.3
2,928,258 - OHPLBJKB_02794 0.79 +0.4
2,928,258 - OHPLBJKB_02794 0.79 -1.1
2,928,258 - OHPLBJKB_02794 0.79 +0.1
2,928,258 - OHPLBJKB_02794 0.79 -1.2
2,928,258 - OHPLBJKB_02794 0.79 +1.1
2,928,308 - OHPLBJKB_02794 0.85 -0.2
2,928,353 + OHPLBJKB_02794 0.90 -1.3
2,928,398 + -0.1
2,928,412 + +1.7
2,928,444 + +1.2
2,928,445 - -0.9
2,928,647 + -0.8
2,928,648 - -0.9
2,928,648 - -1.3
2,928,668 - +0.4
2,928,838 + OHPLBJKB_02795 0.15 -0.5
2,928,903 + OHPLBJKB_02795 0.19 -0.9
2,928,903 + OHPLBJKB_02795 0.19 -0.5
2,928,903 + OHPLBJKB_02795 0.19 +1.1
2,929,009 + OHPLBJKB_02795 0.25 -1.5
2,929,058 + OHPLBJKB_02795 0.28 -0.8
2,929,082 + OHPLBJKB_02795 0.30 +0.0
2,929,082 + OHPLBJKB_02795 0.30 -1.2
2,929,082 + OHPLBJKB_02795 0.30 +0.9
2,929,083 - OHPLBJKB_02795 0.30 -0.6
2,929,123 + OHPLBJKB_02795 0.32 -1.2
2,929,123 + OHPLBJKB_02795 0.32 +0.3
2,929,124 - OHPLBJKB_02795 0.32 -1.5
2,929,124 - OHPLBJKB_02795 0.32 -0.9
2,929,262 - OHPLBJKB_02795 0.41 -0.8
2,929,265 + OHPLBJKB_02795 0.41 -1.2
2,929,265 + OHPLBJKB_02795 0.41 -0.4
2,929,265 + OHPLBJKB_02795 0.41 -0.9
2,929,266 - OHPLBJKB_02795 0.41 -0.2
2,929,352 + OHPLBJKB_02795 0.46 -0.7
2,929,352 + OHPLBJKB_02795 0.46 -0.4
2,929,353 - OHPLBJKB_02795 0.46 -0.4

Or see this region's nucleotide sequence