Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02778 and OHPLBJKB_02779 are separated by 134 nucleotides OHPLBJKB_02779 and OHPLBJKB_02780 are separated by 544 nucleotides
OHPLBJKB_02778: OHPLBJKB_02778 - DNA translocase FtsK, at 2,905,078 to 2,909,067
_02778
OHPLBJKB_02779: OHPLBJKB_02779 - Leucine-responsive regulatory protein, at 2,909,202 to 2,909,696
_02779
OHPLBJKB_02780: OHPLBJKB_02780 - Thioredoxin reductase, at 2,910,241 to 2,911,206
_02780
Position (kb)
2909
2910 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2909.213 kb on + strand at 2909.257 kb on + strand, within OHPLBJKB_02779 at 2909.257 kb on + strand, within OHPLBJKB_02779 at 2909.257 kb on + strand, within OHPLBJKB_02779 at 2909.257 kb on + strand, within OHPLBJKB_02779 at 2909.257 kb on + strand, within OHPLBJKB_02779 at 2909.257 kb on + strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.258 kb on - strand, within OHPLBJKB_02779 at 2909.312 kb on + strand, within OHPLBJKB_02779 at 2909.312 kb on + strand, within OHPLBJKB_02779 at 2909.313 kb on - strand, within OHPLBJKB_02779 at 2909.313 kb on - strand, within OHPLBJKB_02779 at 2909.313 kb on - strand, within OHPLBJKB_02779 at 2909.313 kb on - strand, within OHPLBJKB_02779 at 2909.328 kb on - strand, within OHPLBJKB_02779 at 2909.354 kb on - strand, within OHPLBJKB_02779 at 2909.373 kb on + strand, within OHPLBJKB_02779 at 2909.457 kb on - strand, within OHPLBJKB_02779 at 2909.492 kb on - strand, within OHPLBJKB_02779 at 2909.492 kb on - strand, within OHPLBJKB_02779 at 2909.526 kb on - strand, within OHPLBJKB_02779 at 2909.592 kb on - strand, within OHPLBJKB_02779 at 2909.592 kb on - strand, within OHPLBJKB_02779 at 2909.612 kb on + strand, within OHPLBJKB_02779 at 2909.612 kb on + strand, within OHPLBJKB_02779 at 2909.613 kb on - strand, within OHPLBJKB_02779 at 2909.687 kb on + strand at 2909.687 kb on + strand at 2909.688 kb on - strand at 2909.688 kb on - strand at 2909.691 kb on + strand at 2909.692 kb on - strand at 2909.692 kb on - strand at 2909.692 kb on - strand at 2909.698 kb on - strand at 2909.700 kb on + strand at 2909.713 kb on + strand at 2909.724 kb on + strand at 2909.883 kb on + strand at 2909.887 kb on + strand at 2909.887 kb on + strand at 2909.887 kb on + strand at 2909.887 kb on + strand at 2909.887 kb on + strand at 2909.888 kb on - strand at 2909.888 kb on - strand at 2909.914 kb on + strand at 2909.918 kb on + strand at 2909.919 kb on - strand at 2909.938 kb on + strand at 2909.938 kb on + strand at 2909.939 kb on - strand at 2909.940 kb on + strand at 2909.940 kb on + strand at 2909.941 kb on - strand at 2910.064 kb on + strand at 2910.073 kb on + strand at 2910.073 kb on + strand at 2910.074 kb on - strand at 2910.075 kb on + strand at 2910.075 kb on + strand at 2910.075 kb on + strand at 2910.089 kb on + strand at 2910.089 kb on + strand at 2910.173 kb on - strand at 2910.229 kb on + strand at 2910.229 kb on + strand at 2910.296 kb on - strand at 2910.550 kb on + strand, within OHPLBJKB_02780 at 2910.570 kb on + strand, within OHPLBJKB_02780 at 2910.595 kb on + strand, within OHPLBJKB_02780 at 2910.670 kb on + strand, within OHPLBJKB_02780
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 2,909,213 + -1.8 2,909,257 + OHPLBJKB_02779 0.11 -0.1 2,909,257 + OHPLBJKB_02779 0.11 -1.4 2,909,257 + OHPLBJKB_02779 0.11 -0.6 2,909,257 + OHPLBJKB_02779 0.11 +1.9 2,909,257 + OHPLBJKB_02779 0.11 -0.7 2,909,257 + OHPLBJKB_02779 0.11 +0.2 2,909,258 - OHPLBJKB_02779 0.11 -1.5 2,909,258 - OHPLBJKB_02779 0.11 +0.4 2,909,258 - OHPLBJKB_02779 0.11 +0.4 2,909,258 - OHPLBJKB_02779 0.11 -2.0 2,909,258 - OHPLBJKB_02779 0.11 +0.1 2,909,258 - OHPLBJKB_02779 0.11 -1.1 2,909,258 - OHPLBJKB_02779 0.11 -0.4 2,909,258 - OHPLBJKB_02779 0.11 -1.3 2,909,258 - OHPLBJKB_02779 0.11 +1.2 2,909,258 - OHPLBJKB_02779 0.11 -0.9 2,909,312 + OHPLBJKB_02779 0.22 -1.1 2,909,312 + OHPLBJKB_02779 0.22 +0.8 2,909,313 - OHPLBJKB_02779 0.22 +0.1 2,909,313 - OHPLBJKB_02779 0.22 -1.2 2,909,313 - OHPLBJKB_02779 0.22 -2.2 2,909,313 - OHPLBJKB_02779 0.22 -1.8 2,909,328 - OHPLBJKB_02779 0.25 +0.9 2,909,354 - OHPLBJKB_02779 0.31 -1.6 2,909,373 + OHPLBJKB_02779 0.35 -0.1 2,909,457 - OHPLBJKB_02779 0.52 +0.2 2,909,492 - OHPLBJKB_02779 0.59 -1.5 2,909,492 - OHPLBJKB_02779 0.59 +0.6 2,909,526 - OHPLBJKB_02779 0.65 -0.2 2,909,592 - OHPLBJKB_02779 0.79 +0.0 2,909,592 - OHPLBJKB_02779 0.79 -1.4 2,909,612 + OHPLBJKB_02779 0.83 -1.1 2,909,612 + OHPLBJKB_02779 0.83 -1.2 2,909,613 - OHPLBJKB_02779 0.83 +0.4 2,909,687 + -1.2 2,909,687 + -0.3 2,909,688 - -0.3 2,909,688 - +0.0 2,909,691 + -2.1 2,909,692 - +0.2 2,909,692 - -0.6 2,909,692 - +1.1 2,909,698 - -1.0 2,909,700 + +0.4 2,909,713 + +0.4 2,909,724 + -0.4 2,909,883 + -1.2 2,909,887 + +0.9 2,909,887 + +0.3 2,909,887 + +0.2 2,909,887 + +1.1 2,909,887 + -0.5 2,909,888 - -1.2 2,909,888 - -1.2 2,909,914 + -0.9 2,909,918 + +0.1 2,909,919 - +0.7 2,909,938 + -1.6 2,909,938 + -0.6 2,909,939 - -0.4 2,909,940 + -0.2 2,909,940 + +1.6 2,909,941 - -0.1 2,910,064 + -0.5 2,910,073 + +0.1 2,910,073 + -0.9 2,910,074 - -1.1 2,910,075 + -1.1 2,910,075 + +1.6 2,910,075 + +0.9 2,910,089 + -0.6 2,910,089 + -0.7 2,910,173 - +0.6 2,910,229 + -0.6 2,910,229 + +0.7 2,910,296 - +1.4 2,910,550 + OHPLBJKB_02780 0.32 -1.4 2,910,570 + OHPLBJKB_02780 0.34 -0.1 2,910,595 + OHPLBJKB_02780 0.37 +0.9 2,910,670 + OHPLBJKB_02780 0.44 -0.1
Or see this region's nucleotide sequence