Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02639 and OHPLBJKB_02640 are separated by 586 nucleotides OHPLBJKB_02640 and OHPLBJKB_02641 are separated by 50 nucleotides OHPLBJKB_02641 and OHPLBJKB_02642 are separated by 155 nucleotides OHPLBJKB_02642 and OHPLBJKB_02643 are separated by 53 nucleotides
OHPLBJKB_02639: OHPLBJKB_02639 - putative diguanylate cyclase DgcT, at 2,745,329 to 2,746,687
_02639
OHPLBJKB_02640: OHPLBJKB_02640 - Poly-beta-1,6-N-acetyl-D-glucosamine export protein, at 2,747,274 to 2,748,635
_02640
OHPLBJKB_02641: OHPLBJKB_02641 - IS1 family transposase IS1A, at 2,748,686 to 2,748,961
_02641
OHPLBJKB_02642: OHPLBJKB_02642 - IS1 family transposase IS1S, at 2,749,117 to 2,749,383
_02642
OHPLBJKB_02643: OHPLBJKB_02643 - Poly-beta-1,6-N-acetyl-D-glucosamine export protein, at 2,749,437 to 2,750,474
_02643
Position (kb)
2747
2748
2749 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2746.311 kb on - strand, within OHPLBJKB_02639 at 2746.652 kb on + strand at 2746.661 kb on - strand at 2746.712 kb on + strand at 2746.733 kb on + strand at 2746.796 kb on - strand at 2746.833 kb on + strand at 2746.834 kb on - strand at 2746.834 kb on - strand at 2746.834 kb on - strand at 2746.864 kb on + strand at 2746.865 kb on - strand at 2746.865 kb on - strand at 2746.865 kb on - strand at 2746.870 kb on + strand at 2746.913 kb on - strand at 2747.009 kb on + strand at 2747.113 kb on + strand at 2747.256 kb on + strand at 2747.277 kb on + strand at 2747.278 kb on - strand at 2747.420 kb on + strand, within OHPLBJKB_02640 at 2747.420 kb on + strand, within OHPLBJKB_02640 at 2747.421 kb on - strand, within OHPLBJKB_02640 at 2747.421 kb on - strand, within OHPLBJKB_02640 at 2747.421 kb on - strand, within OHPLBJKB_02640 at 2747.627 kb on + strand, within OHPLBJKB_02640 at 2747.628 kb on - strand, within OHPLBJKB_02640 at 2747.628 kb on - strand, within OHPLBJKB_02640 at 2747.720 kb on + strand, within OHPLBJKB_02640 at 2747.790 kb on + strand, within OHPLBJKB_02640 at 2747.790 kb on + strand, within OHPLBJKB_02640 at 2747.790 kb on + strand, within OHPLBJKB_02640 at 2747.791 kb on - strand, within OHPLBJKB_02640 at 2747.791 kb on - strand, within OHPLBJKB_02640 at 2747.791 kb on - strand, within OHPLBJKB_02640 at 2747.792 kb on + strand, within OHPLBJKB_02640 at 2747.792 kb on + strand, within OHPLBJKB_02640 at 2747.796 kb on + strand, within OHPLBJKB_02640 at 2747.796 kb on + strand, within OHPLBJKB_02640 at 2747.797 kb on - strand, within OHPLBJKB_02640 at 2747.797 kb on - strand, within OHPLBJKB_02640 at 2747.797 kb on - strand, within OHPLBJKB_02640 at 2747.797 kb on - strand, within OHPLBJKB_02640 at 2747.828 kb on - strand, within OHPLBJKB_02640 at 2747.899 kb on + strand, within OHPLBJKB_02640 at 2747.952 kb on - strand, within OHPLBJKB_02640 at 2747.993 kb on + strand, within OHPLBJKB_02640 at 2748.111 kb on - strand, within OHPLBJKB_02640 at 2748.136 kb on + strand, within OHPLBJKB_02640 at 2748.156 kb on - strand, within OHPLBJKB_02640 at 2748.240 kb on + strand, within OHPLBJKB_02640 at 2748.241 kb on - strand, within OHPLBJKB_02640 at 2748.404 kb on + strand, within OHPLBJKB_02640 at 2748.404 kb on + strand, within OHPLBJKB_02640 at 2748.405 kb on - strand, within OHPLBJKB_02640 at 2748.413 kb on + strand, within OHPLBJKB_02640 at 2748.515 kb on + strand at 2748.515 kb on + strand at 2748.515 kb on + strand at 2748.516 kb on - strand at 2748.516 kb on - strand at 2748.558 kb on + strand at 2748.558 kb on + strand at 2748.559 kb on - strand at 2748.607 kb on + strand at 2748.607 kb on + strand at 2748.607 kb on + strand at 2748.608 kb on - strand at 2748.661 kb on - strand at 2748.661 kb on - strand at 2748.661 kb on - strand at 2748.661 kb on - strand at 2749.451 kb on + strand at 2749.451 kb on + strand at 2749.451 kb on + strand at 2749.451 kb on + strand at 2749.458 kb on - strand at 2749.495 kb on + strand at 2749.522 kb on + strand at 2749.523 kb on - strand at 2749.567 kb on + strand, within OHPLBJKB_02643 at 2749.591 kb on + strand, within OHPLBJKB_02643 at 2749.592 kb on - strand, within OHPLBJKB_02643 at 2749.592 kb on - strand, within OHPLBJKB_02643 at 2749.595 kb on + strand, within OHPLBJKB_02643 at 2749.596 kb on - strand, within OHPLBJKB_02643 at 2749.596 kb on - strand, within OHPLBJKB_02643 at 2749.596 kb on - strand, within OHPLBJKB_02643 at 2749.596 kb on - strand, within OHPLBJKB_02643
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 2,746,311 - OHPLBJKB_02639 0.72 +0.2 2,746,652 + +1.2 2,746,661 - -0.1 2,746,712 + -0.6 2,746,733 + -2.2 2,746,796 - +1.3 2,746,833 + -2.4 2,746,834 - -0.4 2,746,834 - -0.8 2,746,834 - -0.6 2,746,864 + -0.2 2,746,865 - +0.4 2,746,865 - -0.4 2,746,865 - -0.0 2,746,870 + +0.3 2,746,913 - +1.3 2,747,009 + -0.2 2,747,113 + +0.3 2,747,256 + -0.4 2,747,277 + -0.4 2,747,278 - -0.2 2,747,420 + OHPLBJKB_02640 0.11 -0.6 2,747,420 + OHPLBJKB_02640 0.11 +0.6 2,747,421 - OHPLBJKB_02640 0.11 +0.4 2,747,421 - OHPLBJKB_02640 0.11 +0.6 2,747,421 - OHPLBJKB_02640 0.11 +0.7 2,747,627 + OHPLBJKB_02640 0.26 -0.0 2,747,628 - OHPLBJKB_02640 0.26 +1.0 2,747,628 - OHPLBJKB_02640 0.26 -1.0 2,747,720 + OHPLBJKB_02640 0.33 +0.4 2,747,790 + OHPLBJKB_02640 0.38 -0.5 2,747,790 + OHPLBJKB_02640 0.38 +1.0 2,747,790 + OHPLBJKB_02640 0.38 -0.2 2,747,791 - OHPLBJKB_02640 0.38 -1.0 2,747,791 - OHPLBJKB_02640 0.38 -0.3 2,747,791 - OHPLBJKB_02640 0.38 -0.7 2,747,792 + OHPLBJKB_02640 0.38 -0.6 2,747,792 + OHPLBJKB_02640 0.38 -0.6 2,747,796 + OHPLBJKB_02640 0.38 +1.5 2,747,796 + OHPLBJKB_02640 0.38 -0.2 2,747,797 - OHPLBJKB_02640 0.38 -0.4 2,747,797 - OHPLBJKB_02640 0.38 -0.2 2,747,797 - OHPLBJKB_02640 0.38 +0.0 2,747,797 - OHPLBJKB_02640 0.38 +0.2 2,747,828 - OHPLBJKB_02640 0.41 +0.4 2,747,899 + OHPLBJKB_02640 0.46 -0.4 2,747,952 - OHPLBJKB_02640 0.50 -1.7 2,747,993 + OHPLBJKB_02640 0.53 -0.8 2,748,111 - OHPLBJKB_02640 0.61 -0.1 2,748,136 + OHPLBJKB_02640 0.63 -0.6 2,748,156 - OHPLBJKB_02640 0.65 -0.4 2,748,240 + OHPLBJKB_02640 0.71 +0.4 2,748,241 - OHPLBJKB_02640 0.71 +0.4 2,748,404 + OHPLBJKB_02640 0.83 -0.1 2,748,404 + OHPLBJKB_02640 0.83 -0.5 2,748,405 - OHPLBJKB_02640 0.83 -0.6 2,748,413 + OHPLBJKB_02640 0.84 +1.4 2,748,515 + +0.9 2,748,515 + +1.2 2,748,515 + -0.0 2,748,516 - +0.4 2,748,516 - -0.3 2,748,558 + +0.3 2,748,558 + +2.0 2,748,559 - -0.6 2,748,607 + +0.6 2,748,607 + +0.4 2,748,607 + +0.1 2,748,608 - +0.2 2,748,661 - +0.7 2,748,661 - -1.0 2,748,661 - -0.6 2,748,661 - +1.0 2,749,451 + +0.1 2,749,451 + +1.1 2,749,451 + +0.8 2,749,451 + +1.5 2,749,458 - +0.4 2,749,495 + +1.4 2,749,522 + -0.5 2,749,523 - +0.8 2,749,567 + OHPLBJKB_02643 0.13 +0.5 2,749,591 + OHPLBJKB_02643 0.15 +0.4 2,749,592 - OHPLBJKB_02643 0.15 +1.0 2,749,592 - OHPLBJKB_02643 0.15 +1.3 2,749,595 + OHPLBJKB_02643 0.15 +0.3 2,749,596 - OHPLBJKB_02643 0.15 -0.6 2,749,596 - OHPLBJKB_02643 0.15 +1.0 2,749,596 - OHPLBJKB_02643 0.15 -0.0 2,749,596 - OHPLBJKB_02643 0.15 -0.2
Or see this region's nucleotide sequence