Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_02529 and OHPLBJKB_02530 are separated by 204 nucleotides OHPLBJKB_02530 and OHPLBJKB_02531 are separated by 220 nucleotides
OHPLBJKB_02529: OHPLBJKB_02529 - Blue light- and temperature-regulated antirepressor BluF, at 2,639,951 to 2,641,162
_02529
OHPLBJKB_02530: OHPLBJKB_02530 - HTH-type transcriptional repressor BluR, at 2,641,367 to 2,642,098
_02530
OHPLBJKB_02531: OHPLBJKB_02531 - putative protein YdfO, at 2,642,319 to 2,642,723
_02531
Position (kb)
2641
2642
2643 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2640.406 kb on + strand, within OHPLBJKB_02529 at 2640.457 kb on + strand, within OHPLBJKB_02529 at 2640.457 kb on + strand, within OHPLBJKB_02529 at 2640.457 kb on + strand, within OHPLBJKB_02529 at 2640.459 kb on + strand, within OHPLBJKB_02529 at 2640.485 kb on - strand, within OHPLBJKB_02529 at 2640.548 kb on - strand, within OHPLBJKB_02529 at 2640.614 kb on - strand, within OHPLBJKB_02529 at 2640.659 kb on - strand, within OHPLBJKB_02529 at 2640.681 kb on + strand, within OHPLBJKB_02529 at 2640.686 kb on - strand, within OHPLBJKB_02529 at 2640.686 kb on - strand, within OHPLBJKB_02529 at 2640.723 kb on + strand, within OHPLBJKB_02529 at 2640.735 kb on + strand, within OHPLBJKB_02529 at 2640.735 kb on + strand, within OHPLBJKB_02529 at 2640.826 kb on + strand, within OHPLBJKB_02529 at 2640.835 kb on - strand, within OHPLBJKB_02529 at 2640.959 kb on - strand, within OHPLBJKB_02529 at 2640.982 kb on + strand, within OHPLBJKB_02529 at 2640.997 kb on - strand, within OHPLBJKB_02529 at 2641.006 kb on + strand, within OHPLBJKB_02529 at 2641.007 kb on - strand, within OHPLBJKB_02529 at 2641.117 kb on + strand at 2641.218 kb on + strand at 2641.218 kb on + strand at 2641.304 kb on - strand at 2641.331 kb on - strand at 2641.331 kb on - strand at 2641.373 kb on + strand at 2641.373 kb on + strand at 2641.411 kb on + strand at 2641.412 kb on - strand at 2641.506 kb on + strand, within OHPLBJKB_02530 at 2641.506 kb on + strand, within OHPLBJKB_02530 at 2641.506 kb on + strand, within OHPLBJKB_02530 at 2641.506 kb on + strand, within OHPLBJKB_02530 at 2641.507 kb on - strand, within OHPLBJKB_02530 at 2641.537 kb on - strand, within OHPLBJKB_02530 at 2641.537 kb on - strand, within OHPLBJKB_02530 at 2641.540 kb on + strand, within OHPLBJKB_02530 at 2641.541 kb on - strand, within OHPLBJKB_02530 at 2641.541 kb on - strand, within OHPLBJKB_02530 at 2641.565 kb on - strand, within OHPLBJKB_02530 at 2641.665 kb on + strand, within OHPLBJKB_02530 at 2641.704 kb on + strand, within OHPLBJKB_02530 at 2641.718 kb on - strand, within OHPLBJKB_02530 at 2641.787 kb on - strand, within OHPLBJKB_02530 at 2641.920 kb on + strand, within OHPLBJKB_02530 at 2642.049 kb on + strand at 2642.073 kb on - strand at 2642.074 kb on + strand at 2642.075 kb on - strand at 2642.132 kb on + strand at 2642.132 kb on + strand at 2642.133 kb on - strand at 2642.135 kb on - strand at 2642.205 kb on - strand at 2642.213 kb on + strand at 2642.225 kb on + strand at 2642.226 kb on - strand at 2642.230 kb on - strand at 2642.230 kb on - strand at 2642.298 kb on + strand at 2642.299 kb on - strand at 2642.299 kb on - strand at 2642.309 kb on + strand at 2642.428 kb on - strand, within OHPLBJKB_02531 at 2642.589 kb on + strand, within OHPLBJKB_02531 at 2642.683 kb on + strand at 2642.736 kb on - strand at 2642.818 kb on - strand at 2643.013 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 2,640,406 + OHPLBJKB_02529 0.38 -1.6 2,640,457 + OHPLBJKB_02529 0.42 +2.9 2,640,457 + OHPLBJKB_02529 0.42 -0.7 2,640,457 + OHPLBJKB_02529 0.42 +0.1 2,640,459 + OHPLBJKB_02529 0.42 -0.4 2,640,485 - OHPLBJKB_02529 0.44 +0.2 2,640,548 - OHPLBJKB_02529 0.49 -0.1 2,640,614 - OHPLBJKB_02529 0.55 +0.5 2,640,659 - OHPLBJKB_02529 0.58 +0.0 2,640,681 + OHPLBJKB_02529 0.60 +0.4 2,640,686 - OHPLBJKB_02529 0.61 -0.1 2,640,686 - OHPLBJKB_02529 0.61 +1.6 2,640,723 + OHPLBJKB_02529 0.64 -0.4 2,640,735 + OHPLBJKB_02529 0.65 +0.4 2,640,735 + OHPLBJKB_02529 0.65 +0.1 2,640,826 + OHPLBJKB_02529 0.72 -1.0 2,640,835 - OHPLBJKB_02529 0.73 -1.6 2,640,959 - OHPLBJKB_02529 0.83 -1.2 2,640,982 + OHPLBJKB_02529 0.85 -0.1 2,640,997 - OHPLBJKB_02529 0.86 -0.2 2,641,006 + OHPLBJKB_02529 0.87 -0.1 2,641,007 - OHPLBJKB_02529 0.87 -0.1 2,641,117 + -0.6 2,641,218 + -0.8 2,641,218 + -1.5 2,641,304 - -0.9 2,641,331 - +1.0 2,641,331 - -0.2 2,641,373 + +0.1 2,641,373 + -0.2 2,641,411 + -0.8 2,641,412 - +0.1 2,641,506 + OHPLBJKB_02530 0.19 +0.4 2,641,506 + OHPLBJKB_02530 0.19 +1.2 2,641,506 + OHPLBJKB_02530 0.19 -0.1 2,641,506 + OHPLBJKB_02530 0.19 +0.9 2,641,507 - OHPLBJKB_02530 0.19 -1.4 2,641,537 - OHPLBJKB_02530 0.23 +1.5 2,641,537 - OHPLBJKB_02530 0.23 -0.4 2,641,540 + OHPLBJKB_02530 0.24 -0.8 2,641,541 - OHPLBJKB_02530 0.24 -0.4 2,641,541 - OHPLBJKB_02530 0.24 -0.1 2,641,565 - OHPLBJKB_02530 0.27 +1.9 2,641,665 + OHPLBJKB_02530 0.41 +2.5 2,641,704 + OHPLBJKB_02530 0.46 +0.7 2,641,718 - OHPLBJKB_02530 0.48 +0.7 2,641,787 - OHPLBJKB_02530 0.57 +0.1 2,641,920 + OHPLBJKB_02530 0.76 -1.6 2,642,049 + +1.4 2,642,073 - -0.6 2,642,074 + -2.6 2,642,075 - +0.4 2,642,132 + -1.0 2,642,132 + +1.1 2,642,133 - +1.4 2,642,135 - -0.9 2,642,205 - +0.8 2,642,213 + +0.6 2,642,225 + +0.6 2,642,226 - +1.5 2,642,230 - -2.1 2,642,230 - -0.4 2,642,298 + +1.1 2,642,299 - -1.9 2,642,299 - -1.2 2,642,309 + -0.4 2,642,428 - OHPLBJKB_02531 0.27 +1.3 2,642,589 + OHPLBJKB_02531 0.67 +0.6 2,642,683 + -0.1 2,642,736 - +2.9 2,642,818 - +0.4 2,643,013 - +0.8
Or see this region's nucleotide sequence