Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01832 and OHPLBJKB_01833 are separated by 6 nucleotides OHPLBJKB_01833 and OHPLBJKB_01834 are separated by 118 nucleotides OHPLBJKB_01834 and OHPLBJKB_01835 are separated by 254 nucleotides
OHPLBJKB_01832: OHPLBJKB_01832 - Trehalose-6-phosphate synthase, at 1,909,387 to 1,910,811
_01832
OHPLBJKB_01833: OHPLBJKB_01833 - Universal stress protein C, at 1,910,818 to 1,911,246
_01833
OHPLBJKB_01834: OHPLBJKB_01834 - IS3 family transposase ISEhe3, at 1,911,365 to 1,911,979
_01834
OHPLBJKB_01835: OHPLBJKB_01835 - hypothetical protein, at 1,912,234 to 1,912,512
_01835
Position (kb)
1910
1911
1912 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1909.851 kb on + strand, within OHPLBJKB_01832 at 1909.894 kb on + strand, within OHPLBJKB_01832 at 1909.894 kb on + strand, within OHPLBJKB_01832 at 1909.895 kb on - strand, within OHPLBJKB_01832 at 1909.895 kb on - strand, within OHPLBJKB_01832 at 1909.895 kb on - strand, within OHPLBJKB_01832 at 1909.895 kb on - strand, within OHPLBJKB_01832 at 1909.984 kb on - strand, within OHPLBJKB_01832 at 1910.022 kb on + strand, within OHPLBJKB_01832 at 1910.023 kb on - strand, within OHPLBJKB_01832 at 1910.084 kb on + strand, within OHPLBJKB_01832 at 1910.131 kb on - strand, within OHPLBJKB_01832 at 1910.183 kb on - strand, within OHPLBJKB_01832 at 1910.216 kb on - strand, within OHPLBJKB_01832 at 1910.369 kb on + strand, within OHPLBJKB_01832 at 1910.387 kb on - strand, within OHPLBJKB_01832 at 1910.387 kb on - strand, within OHPLBJKB_01832 at 1910.453 kb on + strand, within OHPLBJKB_01832 at 1910.640 kb on + strand, within OHPLBJKB_01832 at 1910.640 kb on + strand, within OHPLBJKB_01832 at 1910.640 kb on + strand, within OHPLBJKB_01832 at 1910.640 kb on + strand, within OHPLBJKB_01832 at 1910.640 kb on + strand, within OHPLBJKB_01832 at 1910.641 kb on - strand, within OHPLBJKB_01832 at 1910.707 kb on - strand at 1910.738 kb on + strand at 1910.738 kb on + strand at 1910.747 kb on + strand at 1910.809 kb on + strand at 1910.810 kb on - strand at 1910.819 kb on + strand at 1910.839 kb on + strand at 1910.840 kb on - strand at 1910.840 kb on - strand at 1910.840 kb on - strand at 1910.840 kb on - strand at 1910.868 kb on + strand, within OHPLBJKB_01833 at 1910.869 kb on - strand, within OHPLBJKB_01833 at 1910.869 kb on - strand, within OHPLBJKB_01833 at 1910.956 kb on + strand, within OHPLBJKB_01833 at 1910.956 kb on + strand, within OHPLBJKB_01833 at 1910.957 kb on - strand, within OHPLBJKB_01833 at 1910.967 kb on + strand, within OHPLBJKB_01833 at 1910.967 kb on + strand, within OHPLBJKB_01833 at 1910.967 kb on + strand, within OHPLBJKB_01833 at 1910.968 kb on - strand, within OHPLBJKB_01833 at 1910.968 kb on - strand, within OHPLBJKB_01833 at 1910.977 kb on + strand, within OHPLBJKB_01833 at 1910.994 kb on + strand, within OHPLBJKB_01833 at 1911.037 kb on - strand, within OHPLBJKB_01833 at 1911.076 kb on + strand, within OHPLBJKB_01833 at 1911.077 kb on - strand, within OHPLBJKB_01833 at 1911.100 kb on + strand, within OHPLBJKB_01833 at 1911.101 kb on - strand, within OHPLBJKB_01833 at 1911.101 kb on - strand, within OHPLBJKB_01833 at 1911.110 kb on + strand, within OHPLBJKB_01833 at 1911.110 kb on + strand, within OHPLBJKB_01833 at 1911.135 kb on + strand, within OHPLBJKB_01833 at 1911.136 kb on - strand, within OHPLBJKB_01833 at 1911.139 kb on + strand, within OHPLBJKB_01833 at 1911.139 kb on + strand, within OHPLBJKB_01833 at 1911.139 kb on + strand, within OHPLBJKB_01833 at 1911.140 kb on - strand, within OHPLBJKB_01833 at 1911.140 kb on - strand, within OHPLBJKB_01833 at 1911.171 kb on + strand, within OHPLBJKB_01833 at 1911.237 kb on + strand at 1911.238 kb on - strand at 1911.238 kb on - strand at 1911.240 kb on - strand at 1911.240 kb on - strand at 1911.283 kb on - strand at 1911.339 kb on + strand at 1911.339 kb on + strand at 1911.343 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 1,909,851 + OHPLBJKB_01832 0.33 -0.1 1,909,894 + OHPLBJKB_01832 0.36 -0.4 1,909,894 + OHPLBJKB_01832 0.36 +0.6 1,909,895 - OHPLBJKB_01832 0.36 -0.0 1,909,895 - OHPLBJKB_01832 0.36 -0.4 1,909,895 - OHPLBJKB_01832 0.36 +0.1 1,909,895 - OHPLBJKB_01832 0.36 +0.4 1,909,984 - OHPLBJKB_01832 0.42 -0.2 1,910,022 + OHPLBJKB_01832 0.45 -0.1 1,910,023 - OHPLBJKB_01832 0.45 +2.4 1,910,084 + OHPLBJKB_01832 0.49 -0.2 1,910,131 - OHPLBJKB_01832 0.52 -1.7 1,910,183 - OHPLBJKB_01832 0.56 +1.2 1,910,216 - OHPLBJKB_01832 0.58 +1.9 1,910,369 + OHPLBJKB_01832 0.69 -0.3 1,910,387 - OHPLBJKB_01832 0.70 -0.3 1,910,387 - OHPLBJKB_01832 0.70 -0.5 1,910,453 + OHPLBJKB_01832 0.75 -0.2 1,910,640 + OHPLBJKB_01832 0.88 +0.9 1,910,640 + OHPLBJKB_01832 0.88 -1.3 1,910,640 + OHPLBJKB_01832 0.88 +1.2 1,910,640 + OHPLBJKB_01832 0.88 -1.2 1,910,640 + OHPLBJKB_01832 0.88 +0.3 1,910,641 - OHPLBJKB_01832 0.88 +0.5 1,910,707 - -0.9 1,910,738 + +0.3 1,910,738 + -0.7 1,910,747 + -1.8 1,910,809 + +0.3 1,910,810 - +1.1 1,910,819 + -0.1 1,910,839 + -0.8 1,910,840 - -0.2 1,910,840 - -0.4 1,910,840 - -1.5 1,910,840 - +0.3 1,910,868 + OHPLBJKB_01833 0.12 -0.7 1,910,869 - OHPLBJKB_01833 0.12 -1.3 1,910,869 - OHPLBJKB_01833 0.12 +0.3 1,910,956 + OHPLBJKB_01833 0.32 +0.3 1,910,956 + OHPLBJKB_01833 0.32 +0.2 1,910,957 - OHPLBJKB_01833 0.32 -0.7 1,910,967 + OHPLBJKB_01833 0.35 +1.1 1,910,967 + OHPLBJKB_01833 0.35 -0.7 1,910,967 + OHPLBJKB_01833 0.35 -1.7 1,910,968 - OHPLBJKB_01833 0.35 -0.2 1,910,968 - OHPLBJKB_01833 0.35 -0.3 1,910,977 + OHPLBJKB_01833 0.37 -1.1 1,910,994 + OHPLBJKB_01833 0.41 +1.1 1,911,037 - OHPLBJKB_01833 0.51 -0.7 1,911,076 + OHPLBJKB_01833 0.60 +0.1 1,911,077 - OHPLBJKB_01833 0.60 +0.5 1,911,100 + OHPLBJKB_01833 0.66 -0.2 1,911,101 - OHPLBJKB_01833 0.66 +0.2 1,911,101 - OHPLBJKB_01833 0.66 -0.9 1,911,110 + OHPLBJKB_01833 0.68 -0.5 1,911,110 + OHPLBJKB_01833 0.68 +0.3 1,911,135 + OHPLBJKB_01833 0.74 +0.7 1,911,136 - OHPLBJKB_01833 0.74 -1.0 1,911,139 + OHPLBJKB_01833 0.75 -0.4 1,911,139 + OHPLBJKB_01833 0.75 -0.2 1,911,139 + OHPLBJKB_01833 0.75 +0.8 1,911,140 - OHPLBJKB_01833 0.75 -0.2 1,911,140 - OHPLBJKB_01833 0.75 +0.9 1,911,171 + OHPLBJKB_01833 0.82 -1.0 1,911,237 + -0.5 1,911,238 - -0.1 1,911,238 - -0.7 1,911,240 - +0.1 1,911,240 - -1.5 1,911,283 - -1.0 1,911,339 + +0.4 1,911,339 + -0.1 1,911,343 - -0.8
Or see this region's nucleotide sequence