Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01175 and OHPLBJKB_01176 are separated by 144 nucleotides OHPLBJKB_01176 and OHPLBJKB_01177 are separated by 118 nucleotides
OHPLBJKB_01175: OHPLBJKB_01175 - hypothetical protein, at 1,207,825 to 1,208,679
_01175
OHPLBJKB_01176: OHPLBJKB_01176 - Inositol-1-monophosphatase, at 1,208,824 to 1,209,627
_01176
OHPLBJKB_01177: OHPLBJKB_01177 - 'tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ' transl_table=11, at 1,209,746 to 1,210,486
_01177
Position (kb)
1208
1209
1210 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1207.826 kb on + strand at 1207.826 kb on + strand at 1207.827 kb on - strand at 1207.930 kb on + strand, within OHPLBJKB_01175 at 1207.930 kb on + strand, within OHPLBJKB_01175 at 1207.963 kb on - strand, within OHPLBJKB_01175 at 1207.964 kb on + strand, within OHPLBJKB_01175 at 1207.964 kb on + strand, within OHPLBJKB_01175 at 1207.965 kb on - strand, within OHPLBJKB_01175 at 1207.965 kb on - strand, within OHPLBJKB_01175 at 1207.965 kb on - strand, within OHPLBJKB_01175 at 1208.020 kb on + strand, within OHPLBJKB_01175 at 1208.021 kb on - strand, within OHPLBJKB_01175 at 1208.021 kb on - strand, within OHPLBJKB_01175 at 1208.051 kb on + strand, within OHPLBJKB_01175 at 1208.066 kb on + strand, within OHPLBJKB_01175 at 1208.066 kb on + strand, within OHPLBJKB_01175 at 1208.067 kb on - strand, within OHPLBJKB_01175 at 1208.067 kb on - strand, within OHPLBJKB_01175 at 1208.080 kb on + strand, within OHPLBJKB_01175 at 1208.080 kb on + strand, within OHPLBJKB_01175 at 1208.080 kb on + strand, within OHPLBJKB_01175 at 1208.081 kb on - strand, within OHPLBJKB_01175 at 1208.081 kb on - strand, within OHPLBJKB_01175 at 1208.084 kb on + strand, within OHPLBJKB_01175 at 1208.084 kb on + strand, within OHPLBJKB_01175 at 1208.123 kb on + strand, within OHPLBJKB_01175 at 1208.124 kb on - strand, within OHPLBJKB_01175 at 1208.124 kb on - strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.158 kb on + strand, within OHPLBJKB_01175 at 1208.159 kb on - strand, within OHPLBJKB_01175 at 1208.211 kb on + strand, within OHPLBJKB_01175 at 1208.245 kb on + strand, within OHPLBJKB_01175 at 1208.245 kb on + strand, within OHPLBJKB_01175 at 1208.286 kb on + strand, within OHPLBJKB_01175 at 1208.352 kb on + strand, within OHPLBJKB_01175 at 1208.352 kb on + strand, within OHPLBJKB_01175 at 1208.368 kb on - strand, within OHPLBJKB_01175 at 1208.368 kb on - strand, within OHPLBJKB_01175 at 1208.368 kb on - strand, within OHPLBJKB_01175 at 1208.409 kb on + strand, within OHPLBJKB_01175 at 1208.409 kb on + strand, within OHPLBJKB_01175 at 1208.410 kb on - strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.576 kb on + strand, within OHPLBJKB_01175 at 1208.577 kb on - strand, within OHPLBJKB_01175 at 1208.577 kb on - strand, within OHPLBJKB_01175 at 1208.577 kb on - strand, within OHPLBJKB_01175 at 1208.605 kb on + strand at 1208.610 kb on - strand at 1208.638 kb on - strand at 1208.702 kb on - strand at 1208.702 kb on - strand at 1208.712 kb on - strand at 1208.749 kb on + strand at 1208.765 kb on + strand at 1208.766 kb on - strand at 1209.705 kb on + strand at 1209.757 kb on + strand at 1209.964 kb on + strand, within OHPLBJKB_01177 at 1209.965 kb on - strand, within OHPLBJKB_01177 at 1210.163 kb on + strand, within OHPLBJKB_01177 at 1210.205 kb on + strand, within OHPLBJKB_01177 at 1210.205 kb on + strand, within OHPLBJKB_01177 at 1210.206 kb on - strand, within OHPLBJKB_01177 at 1210.304 kb on + strand, within OHPLBJKB_01177 at 1210.375 kb on + strand, within OHPLBJKB_01177 at 1210.375 kb on + strand, within OHPLBJKB_01177 at 1210.376 kb on - strand, within OHPLBJKB_01177 at 1210.465 kb on + strand at 1210.472 kb on - strand at 1210.472 kb on - strand at 1210.520 kb on + strand at 1210.521 kb on - strand at 1210.536 kb on + strand at 1210.537 kb on - strand at 1210.547 kb on - strand at 1210.611 kb on + strand at 1210.621 kb on - strand at 1210.621 kb on - strand at 1210.627 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 1,207,826 + +0.6 1,207,826 + -0.8 1,207,827 - -0.3 1,207,930 + OHPLBJKB_01175 0.12 -2.1 1,207,930 + OHPLBJKB_01175 0.12 -0.1 1,207,963 - OHPLBJKB_01175 0.16 +0.0 1,207,964 + OHPLBJKB_01175 0.16 -0.8 1,207,964 + OHPLBJKB_01175 0.16 +0.2 1,207,965 - OHPLBJKB_01175 0.16 -0.8 1,207,965 - OHPLBJKB_01175 0.16 -2.1 1,207,965 - OHPLBJKB_01175 0.16 -0.8 1,208,020 + OHPLBJKB_01175 0.23 +1.0 1,208,021 - OHPLBJKB_01175 0.23 -0.6 1,208,021 - OHPLBJKB_01175 0.23 -0.3 1,208,051 + OHPLBJKB_01175 0.26 -1.6 1,208,066 + OHPLBJKB_01175 0.28 +0.7 1,208,066 + OHPLBJKB_01175 0.28 -0.5 1,208,067 - OHPLBJKB_01175 0.28 -1.2 1,208,067 - OHPLBJKB_01175 0.28 -0.9 1,208,080 + OHPLBJKB_01175 0.30 -1.0 1,208,080 + OHPLBJKB_01175 0.30 +1.4 1,208,080 + OHPLBJKB_01175 0.30 +1.2 1,208,081 - OHPLBJKB_01175 0.30 -0.1 1,208,081 - OHPLBJKB_01175 0.30 +0.3 1,208,084 + OHPLBJKB_01175 0.30 -0.0 1,208,084 + OHPLBJKB_01175 0.30 -0.4 1,208,123 + OHPLBJKB_01175 0.35 +0.4 1,208,124 - OHPLBJKB_01175 0.35 -0.1 1,208,124 - OHPLBJKB_01175 0.35 +2.0 1,208,158 + OHPLBJKB_01175 0.39 -0.9 1,208,158 + OHPLBJKB_01175 0.39 -0.3 1,208,158 + OHPLBJKB_01175 0.39 -0.1 1,208,158 + OHPLBJKB_01175 0.39 -1.4 1,208,158 + OHPLBJKB_01175 0.39 -1.7 1,208,158 + OHPLBJKB_01175 0.39 +0.4 1,208,158 + OHPLBJKB_01175 0.39 -0.3 1,208,158 + OHPLBJKB_01175 0.39 +0.2 1,208,159 - OHPLBJKB_01175 0.39 -0.4 1,208,211 + OHPLBJKB_01175 0.45 +0.7 1,208,245 + OHPLBJKB_01175 0.49 -1.6 1,208,245 + OHPLBJKB_01175 0.49 -1.1 1,208,286 + OHPLBJKB_01175 0.54 +0.4 1,208,352 + OHPLBJKB_01175 0.62 -0.8 1,208,352 + OHPLBJKB_01175 0.62 +0.9 1,208,368 - OHPLBJKB_01175 0.64 +0.4 1,208,368 - OHPLBJKB_01175 0.64 -1.5 1,208,368 - OHPLBJKB_01175 0.64 -0.2 1,208,409 + OHPLBJKB_01175 0.68 -0.6 1,208,409 + OHPLBJKB_01175 0.68 -1.3 1,208,410 - OHPLBJKB_01175 0.68 -1.1 1,208,576 + OHPLBJKB_01175 0.88 +0.2 1,208,576 + OHPLBJKB_01175 0.88 +0.7 1,208,576 + OHPLBJKB_01175 0.88 -0.6 1,208,576 + OHPLBJKB_01175 0.88 +0.2 1,208,577 - OHPLBJKB_01175 0.88 +0.3 1,208,577 - OHPLBJKB_01175 0.88 -0.8 1,208,577 - OHPLBJKB_01175 0.88 -0.5 1,208,605 + -0.3 1,208,610 - +0.2 1,208,638 - -0.5 1,208,702 - -1.7 1,208,702 - +0.3 1,208,712 - -0.6 1,208,749 + -0.1 1,208,765 + +0.0 1,208,766 - -0.1 1,209,705 + +0.2 1,209,757 + +1.4 1,209,964 + OHPLBJKB_01177 0.29 -0.7 1,209,965 - OHPLBJKB_01177 0.30 -0.7 1,210,163 + OHPLBJKB_01177 0.56 +0.4 1,210,205 + OHPLBJKB_01177 0.62 -0.8 1,210,205 + OHPLBJKB_01177 0.62 -1.6 1,210,206 - OHPLBJKB_01177 0.62 +0.2 1,210,304 + OHPLBJKB_01177 0.75 +0.6 1,210,375 + OHPLBJKB_01177 0.85 -0.3 1,210,375 + OHPLBJKB_01177 0.85 -0.4 1,210,376 - OHPLBJKB_01177 0.85 -0.2 1,210,465 + -0.4 1,210,472 - +0.9 1,210,472 - +0.0 1,210,520 + -0.9 1,210,521 - +0.1 1,210,536 + -1.4 1,210,537 - +0.1 1,210,547 - +0.3 1,210,611 + -0.6 1,210,621 - +0.2 1,210,621 - -1.8 1,210,627 + -0.1
Or see this region's nucleotide sequence