Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00934 and OHPLBJKB_00935 are separated by 57 nucleotides OHPLBJKB_00935 and OHPLBJKB_00936 are separated by 556 nucleotides
OHPLBJKB_00934: OHPLBJKB_00934 - L-serine dehydratase 2, at 961,749 to 963,116
_00934
OHPLBJKB_00935: OHPLBJKB_00935 - Serine transporter, at 963,174 to 964,463
_00935
OHPLBJKB_00936: OHPLBJKB_00936 - 'Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase' transl_table=11, at 965,020 to 966,384
_00936
Position (kb) 963
964
965 Strain fitness (log2 ratio) -2
-1
0
1
2 at 962.218 kb on + strand, within OHPLBJKB_00934 at 962.222 kb on - strand, within OHPLBJKB_00934 at 962.222 kb on - strand, within OHPLBJKB_00934 at 962.481 kb on + strand, within OHPLBJKB_00934 at 962.482 kb on - strand, within OHPLBJKB_00934 at 962.482 kb on - strand, within OHPLBJKB_00934 at 962.605 kb on + strand, within OHPLBJKB_00934 at 962.634 kb on - strand, within OHPLBJKB_00934 at 962.681 kb on + strand, within OHPLBJKB_00934 at 962.682 kb on - strand, within OHPLBJKB_00934 at 962.686 kb on + strand, within OHPLBJKB_00934 at 962.686 kb on + strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.687 kb on - strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.689 kb on + strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.690 kb on - strand, within OHPLBJKB_00934 at 962.701 kb on + strand, within OHPLBJKB_00934 at 962.844 kb on - strand, within OHPLBJKB_00934 at 962.859 kb on - strand, within OHPLBJKB_00934 at 962.918 kb on + strand, within OHPLBJKB_00934 at 962.919 kb on - strand, within OHPLBJKB_00934 at 962.919 kb on - strand, within OHPLBJKB_00934 at 962.919 kb on - strand, within OHPLBJKB_00934 at 962.999 kb on + strand at 963.000 kb on - strand at 963.009 kb on - strand at 963.124 kb on - strand at 963.124 kb on - strand at 963.124 kb on - strand at 963.176 kb on - strand at 963.176 kb on - strand at 963.190 kb on + strand at 963.191 kb on - strand at 963.191 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.235 kb on - strand at 963.257 kb on - strand at 963.260 kb on + strand at 963.261 kb on - strand at 963.261 kb on - strand at 963.261 kb on - strand at 963.261 kb on - strand at 963.289 kb on + strand at 963.290 kb on - strand at 963.290 kb on - strand at 963.290 kb on - strand at 963.443 kb on + strand, within OHPLBJKB_00935 at 963.443 kb on + strand, within OHPLBJKB_00935 at 963.443 kb on + strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.444 kb on - strand, within OHPLBJKB_00935 at 963.464 kb on + strand, within OHPLBJKB_00935 at 963.464 kb on + strand, within OHPLBJKB_00935 at 963.502 kb on + strand, within OHPLBJKB_00935 at 963.749 kb on - strand, within OHPLBJKB_00935 at 963.919 kb on + strand, within OHPLBJKB_00935 at 963.919 kb on + strand, within OHPLBJKB_00935 at 963.919 kb on + strand, within OHPLBJKB_00935 at 963.940 kb on - strand, within OHPLBJKB_00935 at 963.940 kb on - strand, within OHPLBJKB_00935 at 963.958 kb on - strand, within OHPLBJKB_00935 at 963.965 kb on + strand, within OHPLBJKB_00935 at 963.966 kb on - strand, within OHPLBJKB_00935 at 963.966 kb on - strand, within OHPLBJKB_00935 at 964.065 kb on - strand, within OHPLBJKB_00935 at 964.065 kb on - strand, within OHPLBJKB_00935 at 964.065 kb on - strand, within OHPLBJKB_00935 at 964.098 kb on - strand, within OHPLBJKB_00935 at 964.111 kb on - strand, within OHPLBJKB_00935 at 964.115 kb on + strand, within OHPLBJKB_00935 at 964.115 kb on + strand, within OHPLBJKB_00935 at 964.115 kb on + strand, within OHPLBJKB_00935 at 964.116 kb on - strand, within OHPLBJKB_00935 at 964.116 kb on - strand, within OHPLBJKB_00935 at 964.140 kb on - strand, within OHPLBJKB_00935 at 964.140 kb on - strand, within OHPLBJKB_00935 at 964.150 kb on + strand, within OHPLBJKB_00935 at 964.150 kb on + strand, within OHPLBJKB_00935 at 964.151 kb on - strand, within OHPLBJKB_00935 at 964.161 kb on - strand, within OHPLBJKB_00935 at 964.161 kb on - strand, within OHPLBJKB_00935 at 964.169 kb on + strand, within OHPLBJKB_00935 at 964.198 kb on - strand, within OHPLBJKB_00935 at 964.240 kb on - strand, within OHPLBJKB_00935 at 964.293 kb on - strand, within OHPLBJKB_00935 at 964.419 kb on - strand at 964.465 kb on + strand at 964.466 kb on - strand at 964.466 kb on - strand at 964.466 kb on - strand at 964.466 kb on - strand at 964.489 kb on - strand at 964.489 kb on - strand at 964.489 kb on - strand at 964.489 kb on - strand at 964.564 kb on - strand at 964.571 kb on + strand at 964.582 kb on + strand at 964.612 kb on + strand at 964.613 kb on - strand at 964.613 kb on - strand at 964.617 kb on - strand at 964.617 kb on - strand at 964.617 kb on - strand at 964.620 kb on + strand at 964.620 kb on + strand at 964.643 kb on - strand at 964.647 kb on + strand at 964.721 kb on - strand at 964.765 kb on - strand at 964.766 kb on + strand at 964.766 kb on + strand at 964.907 kb on + strand at 964.940 kb on + strand at 964.942 kb on + strand at 964.942 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.966 kb on + strand at 964.967 kb on - strand at 964.967 kb on - strand at 964.967 kb on - strand at 964.967 kb on - strand at 965.021 kb on + strand at 965.022 kb on - strand at 965.022 kb on - strand at 965.022 kb on - strand at 965.037 kb on - strand at 965.049 kb on - strand at 965.049 kb on - strand at 965.049 kb on - strand at 965.070 kb on + strand at 965.071 kb on - strand at 965.071 kb on - strand at 965.095 kb on + strand at 965.095 kb on + strand at 965.096 kb on - strand at 965.109 kb on + strand at 965.109 kb on + strand at 965.109 kb on + strand at 965.109 kb on + strand at 965.118 kb on + strand at 965.119 kb on - strand at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.185 kb on + strand, within OHPLBJKB_00936 at 965.186 kb on - strand, within OHPLBJKB_00936 at 965.186 kb on - strand, within OHPLBJKB_00936 at 965.278 kb on - strand, within OHPLBJKB_00936 at 965.337 kb on + strand, within OHPLBJKB_00936 at 965.337 kb on + strand, within OHPLBJKB_00936 at 965.337 kb on + strand, within OHPLBJKB_00936 at 965.338 kb on - strand, within OHPLBJKB_00936 at 965.338 kb on - strand, within OHPLBJKB_00936
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 962,218 + OHPLBJKB_00934 0.34 -0.6 962,222 - OHPLBJKB_00934 0.35 +0.0 962,222 - OHPLBJKB_00934 0.35 -0.4 962,481 + OHPLBJKB_00934 0.54 -1.1 962,482 - OHPLBJKB_00934 0.54 -0.2 962,482 - OHPLBJKB_00934 0.54 -0.5 962,605 + OHPLBJKB_00934 0.63 +1.7 962,634 - OHPLBJKB_00934 0.65 +1.5 962,681 + OHPLBJKB_00934 0.68 -2.7 962,682 - OHPLBJKB_00934 0.68 +0.4 962,686 + OHPLBJKB_00934 0.68 -1.4 962,686 + OHPLBJKB_00934 0.68 +1.2 962,687 - OHPLBJKB_00934 0.69 +0.2 962,687 - OHPLBJKB_00934 0.69 +0.5 962,687 - OHPLBJKB_00934 0.69 +0.4 962,687 - OHPLBJKB_00934 0.69 -0.3 962,689 + OHPLBJKB_00934 0.69 -0.5 962,689 + OHPLBJKB_00934 0.69 +0.5 962,689 + OHPLBJKB_00934 0.69 -0.3 962,689 + OHPLBJKB_00934 0.69 -0.6 962,689 + OHPLBJKB_00934 0.69 -0.2 962,689 + OHPLBJKB_00934 0.69 -0.0 962,689 + OHPLBJKB_00934 0.69 -0.7 962,689 + OHPLBJKB_00934 0.69 -2.2 962,689 + OHPLBJKB_00934 0.69 +0.4 962,690 - OHPLBJKB_00934 0.69 -0.4 962,690 - OHPLBJKB_00934 0.69 +0.3 962,690 - OHPLBJKB_00934 0.69 -1.0 962,690 - OHPLBJKB_00934 0.69 -0.7 962,690 - OHPLBJKB_00934 0.69 -1.5 962,690 - OHPLBJKB_00934 0.69 -1.2 962,690 - OHPLBJKB_00934 0.69 +1.3 962,701 + OHPLBJKB_00934 0.70 +1.7 962,844 - OHPLBJKB_00934 0.80 +0.5 962,859 - OHPLBJKB_00934 0.81 -0.4 962,918 + OHPLBJKB_00934 0.85 -0.1 962,919 - OHPLBJKB_00934 0.86 -1.5 962,919 - OHPLBJKB_00934 0.86 +0.4 962,919 - OHPLBJKB_00934 0.86 -1.3 962,999 + +0.8 963,000 - -0.6 963,009 - -2.3 963,124 - -0.2 963,124 - +0.5 963,124 - -1.2 963,176 - +0.1 963,176 - -0.2 963,190 + +0.2 963,191 - -1.4 963,191 - -1.4 963,235 - +0.1 963,235 - -1.0 963,235 - +2.1 963,235 - +0.1 963,235 - +0.7 963,235 - +0.2 963,235 - +2.1 963,257 - -0.1 963,260 + +0.3 963,261 - +1.1 963,261 - -1.4 963,261 - +0.8 963,261 - -0.2 963,289 + +0.4 963,290 - -1.1 963,290 - +1.1 963,290 - +0.6 963,443 + OHPLBJKB_00935 0.21 -0.2 963,443 + OHPLBJKB_00935 0.21 -0.2 963,443 + OHPLBJKB_00935 0.21 -2.1 963,444 - OHPLBJKB_00935 0.21 -0.0 963,444 - OHPLBJKB_00935 0.21 -1.8 963,444 - OHPLBJKB_00935 0.21 +0.1 963,444 - OHPLBJKB_00935 0.21 +0.1 963,464 + OHPLBJKB_00935 0.22 -0.9 963,464 + OHPLBJKB_00935 0.22 +0.8 963,502 + OHPLBJKB_00935 0.25 -0.3 963,749 - OHPLBJKB_00935 0.45 +0.8 963,919 + OHPLBJKB_00935 0.58 -0.8 963,919 + OHPLBJKB_00935 0.58 -0.1 963,919 + OHPLBJKB_00935 0.58 +1.1 963,940 - OHPLBJKB_00935 0.59 +0.2 963,940 - OHPLBJKB_00935 0.59 +0.1 963,958 - OHPLBJKB_00935 0.61 +0.3 963,965 + OHPLBJKB_00935 0.61 +1.1 963,966 - OHPLBJKB_00935 0.61 -0.0 963,966 - OHPLBJKB_00935 0.61 +0.2 964,065 - OHPLBJKB_00935 0.69 -1.9 964,065 - OHPLBJKB_00935 0.69 +0.8 964,065 - OHPLBJKB_00935 0.69 -0.2 964,098 - OHPLBJKB_00935 0.72 -2.3 964,111 - OHPLBJKB_00935 0.73 -0.4 964,115 + OHPLBJKB_00935 0.73 -1.4 964,115 + OHPLBJKB_00935 0.73 +2.1 964,115 + OHPLBJKB_00935 0.73 +0.5 964,116 - OHPLBJKB_00935 0.73 +0.3 964,116 - OHPLBJKB_00935 0.73 -0.9 964,140 - OHPLBJKB_00935 0.75 -1.7 964,140 - OHPLBJKB_00935 0.75 -0.5 964,150 + OHPLBJKB_00935 0.76 -2.2 964,150 + OHPLBJKB_00935 0.76 -1.5 964,151 - OHPLBJKB_00935 0.76 -0.7 964,161 - OHPLBJKB_00935 0.77 +0.9 964,161 - OHPLBJKB_00935 0.77 +0.1 964,169 + OHPLBJKB_00935 0.77 -0.9 964,198 - OHPLBJKB_00935 0.79 -0.4 964,240 - OHPLBJKB_00935 0.83 -0.5 964,293 - OHPLBJKB_00935 0.87 -0.6 964,419 - -0.4 964,465 + +1.1 964,466 - +1.4 964,466 - -0.6 964,466 - +0.1 964,466 - -0.4 964,489 - -0.5 964,489 - -1.1 964,489 - -0.6 964,489 - -0.8 964,564 - -0.4 964,571 + +0.0 964,582 + +0.1 964,612 + -0.8 964,613 - +0.8 964,613 - +0.3 964,617 - -1.2 964,617 - -1.6 964,617 - -0.7 964,620 + +0.9 964,620 + +0.7 964,643 - +0.1 964,647 + +0.4 964,721 - +1.1 964,765 - -0.9 964,766 + -0.9 964,766 + +0.6 964,907 + -0.6 964,940 + +0.7 964,942 + -0.5 964,942 + -0.6 964,966 + +1.4 964,966 + -0.8 964,966 + -1.1 964,966 + -0.1 964,966 + +0.2 964,966 + +0.0 964,967 - +0.3 964,967 - +0.3 964,967 - +0.1 964,967 - +0.3 965,021 + -0.4 965,022 - +0.1 965,022 - -0.6 965,022 - -0.7 965,037 - +1.1 965,049 - +0.2 965,049 - +0.7 965,049 - -0.0 965,070 + +0.9 965,071 - -1.0 965,071 - +0.3 965,095 + -0.7 965,095 + +0.4 965,096 - +1.3 965,109 + +1.1 965,109 + -0.0 965,109 + -0.2 965,109 + +0.2 965,118 + -0.2 965,119 - +0.1 965,185 + OHPLBJKB_00936 0.12 -0.8 965,185 + OHPLBJKB_00936 0.12 +0.2 965,185 + OHPLBJKB_00936 0.12 -0.4 965,185 + OHPLBJKB_00936 0.12 -0.6 965,186 - OHPLBJKB_00936 0.12 -0.4 965,186 - OHPLBJKB_00936 0.12 +0.2 965,278 - OHPLBJKB_00936 0.19 -1.6 965,337 + OHPLBJKB_00936 0.23 +1.6 965,337 + OHPLBJKB_00936 0.23 +0.3 965,337 + OHPLBJKB_00936 0.23 -0.5 965,338 - OHPLBJKB_00936 0.23 -0.7 965,338 - OHPLBJKB_00936 0.23 -0.4
Or see this region's nucleotide sequence