Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00676 and OHPLBJKB_00677 overlap by 4 nucleotides OHPLBJKB_00677 and OHPLBJKB_00678 are separated by 151 nucleotides OHPLBJKB_00678 and OHPLBJKB_00679 are separated by 52 nucleotides OHPLBJKB_00679 and OHPLBJKB_00680 are separated by 204 nucleotides
OHPLBJKB_00676: OHPLBJKB_00676 - Sensor protein QseC, at 694,237 to 695,586
_00676
OHPLBJKB_00677: OHPLBJKB_00677 - Transcriptional regulatory protein QseB, at 695,583 to 696,242
_00677
OHPLBJKB_00678: OHPLBJKB_00678 - Protein YgiW, at 696,394 to 696,786
_00678
OHPLBJKB_00679: OHPLBJKB_00679 - DNA gyrase inhibitor, at 696,839 to 697,321
_00679
OHPLBJKB_00680: OHPLBJKB_00680 - mRNA interferase toxin MqsR, at 697,526 to 697,822
_00680
Position (kb) 696
697 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 695.419 kb on - strand, within OHPLBJKB_00676 at 695.595 kb on + strand at 695.595 kb on + strand at 695.595 kb on + strand at 695.595 kb on + strand at 695.596 kb on - strand at 695.596 kb on - strand at 695.596 kb on - strand at 695.596 kb on - strand at 695.603 kb on - strand at 695.681 kb on + strand, within OHPLBJKB_00677 at 695.705 kb on + strand, within OHPLBJKB_00677 at 695.706 kb on - strand, within OHPLBJKB_00677 at 695.707 kb on + strand, within OHPLBJKB_00677 at 695.708 kb on - strand, within OHPLBJKB_00677 at 695.708 kb on - strand, within OHPLBJKB_00677 at 695.708 kb on - strand, within OHPLBJKB_00677 at 695.708 kb on - strand, within OHPLBJKB_00677 at 695.799 kb on + strand, within OHPLBJKB_00677 at 695.925 kb on + strand, within OHPLBJKB_00677 at 695.926 kb on - strand, within OHPLBJKB_00677 at 695.943 kb on - strand, within OHPLBJKB_00677 at 695.979 kb on + strand, within OHPLBJKB_00677 at 695.979 kb on + strand, within OHPLBJKB_00677 at 695.980 kb on - strand, within OHPLBJKB_00677 at 695.980 kb on - strand, within OHPLBJKB_00677 at 696.109 kb on + strand, within OHPLBJKB_00677 at 696.110 kb on - strand, within OHPLBJKB_00677 at 696.110 kb on - strand, within OHPLBJKB_00677 at 696.110 kb on - strand, within OHPLBJKB_00677 at 696.110 kb on - strand, within OHPLBJKB_00677 at 696.120 kb on - strand, within OHPLBJKB_00677 at 696.120 kb on - strand, within OHPLBJKB_00677 at 696.121 kb on + strand, within OHPLBJKB_00677 at 696.121 kb on + strand, within OHPLBJKB_00677 at 696.121 kb on + strand, within OHPLBJKB_00677 at 696.122 kb on - strand, within OHPLBJKB_00677 at 696.122 kb on - strand, within OHPLBJKB_00677 at 696.179 kb on + strand at 696.180 kb on - strand at 696.180 kb on - strand at 696.180 kb on - strand at 696.180 kb on - strand at 696.266 kb on - strand at 696.278 kb on + strand at 696.291 kb on - strand at 696.291 kb on - strand at 696.303 kb on - strand at 696.348 kb on + strand at 696.348 kb on + strand at 696.349 kb on - strand at 696.377 kb on + strand at 696.377 kb on + strand at 696.377 kb on + strand at 696.389 kb on + strand at 696.390 kb on - strand at 696.390 kb on - strand at 696.390 kb on - strand at 696.390 kb on - strand at 696.390 kb on - strand at 696.539 kb on + strand, within OHPLBJKB_00678 at 696.539 kb on + strand, within OHPLBJKB_00678 at 696.540 kb on - strand, within OHPLBJKB_00678 at 696.540 kb on - strand, within OHPLBJKB_00678 at 696.540 kb on - strand, within OHPLBJKB_00678 at 696.619 kb on + strand, within OHPLBJKB_00678 at 696.619 kb on + strand, within OHPLBJKB_00678 at 696.620 kb on - strand, within OHPLBJKB_00678 at 696.620 kb on - strand, within OHPLBJKB_00678 at 696.620 kb on - strand, within OHPLBJKB_00678 at 696.620 kb on - strand, within OHPLBJKB_00678 at 696.620 kb on - strand, within OHPLBJKB_00678 at 696.645 kb on + strand, within OHPLBJKB_00678 at 696.645 kb on + strand, within OHPLBJKB_00678 at 696.776 kb on + strand at 696.791 kb on + strand at 696.861 kb on + strand at 696.861 kb on + strand at 696.861 kb on + strand at 696.861 kb on + strand at 696.862 kb on - strand at 696.862 kb on - strand at 696.862 kb on - strand at 696.886 kb on - strand at 696.932 kb on + strand, within OHPLBJKB_00679 at 696.932 kb on + strand, within OHPLBJKB_00679 at 696.932 kb on + strand, within OHPLBJKB_00679 at 696.932 kb on + strand, within OHPLBJKB_00679 at 696.932 kb on + strand, within OHPLBJKB_00679 at 696.933 kb on - strand, within OHPLBJKB_00679 at 696.933 kb on - strand, within OHPLBJKB_00679 at 696.933 kb on - strand, within OHPLBJKB_00679 at 697.133 kb on + strand, within OHPLBJKB_00679 at 697.168 kb on + strand, within OHPLBJKB_00679 at 697.231 kb on + strand, within OHPLBJKB_00679 at 697.231 kb on + strand, within OHPLBJKB_00679 at 697.253 kb on + strand, within OHPLBJKB_00679 at 697.254 kb on - strand, within OHPLBJKB_00679 at 697.304 kb on + strand at 697.304 kb on + strand at 697.304 kb on + strand at 697.304 kb on + strand at 697.304 kb on + strand at 697.304 kb on + strand at 697.305 kb on - strand at 697.305 kb on - strand at 697.305 kb on - strand at 697.305 kb on - strand at 697.305 kb on - strand at 697.342 kb on + strand at 697.344 kb on + strand at 697.345 kb on - strand at 697.371 kb on + strand at 697.371 kb on + strand at 697.372 kb on - strand at 697.387 kb on + strand at 697.387 kb on + strand at 697.387 kb on + strand at 697.387 kb on + strand at 697.387 kb on + strand at 697.387 kb on + strand at 697.387 kb on + strand at 697.388 kb on - strand at 697.389 kb on + strand at 697.389 kb on + strand at 697.389 kb on + strand at 697.389 kb on + strand at 697.389 kb on + strand at 697.389 kb on + strand at 697.390 kb on - strand at 697.390 kb on - strand at 697.390 kb on - strand at 697.415 kb on + strand at 697.415 kb on + strand at 697.441 kb on + strand at 697.447 kb on + strand at 697.447 kb on + strand at 697.448 kb on - strand at 697.479 kb on + strand at 697.546 kb on + strand at 697.546 kb on + strand at 697.546 kb on + strand at 697.546 kb on + strand at 697.546 kb on + strand at 697.546 kb on + strand at 697.546 kb on + strand at 697.546 kb on + strand at 697.547 kb on - strand at 697.547 kb on - strand at 697.547 kb on - strand at 697.547 kb on - strand at 697.547 kb on - strand at 697.547 kb on - strand at 697.594 kb on + strand, within OHPLBJKB_00680 at 697.594 kb on + strand, within OHPLBJKB_00680 at 697.595 kb on - strand, within OHPLBJKB_00680 at 697.603 kb on + strand, within OHPLBJKB_00680 at 697.603 kb on + strand, within OHPLBJKB_00680 at 697.603 kb on + strand, within OHPLBJKB_00680 at 697.604 kb on - strand, within OHPLBJKB_00680 at 697.615 kb on - strand, within OHPLBJKB_00680 at 697.629 kb on + strand, within OHPLBJKB_00680 at 697.648 kb on + strand, within OHPLBJKB_00680 at 697.648 kb on + strand, within OHPLBJKB_00680 at 697.648 kb on + strand, within OHPLBJKB_00680 at 697.648 kb on + strand, within OHPLBJKB_00680 at 697.649 kb on - strand, within OHPLBJKB_00680 at 697.649 kb on - strand, within OHPLBJKB_00680 at 697.654 kb on + strand, within OHPLBJKB_00680 at 697.688 kb on + strand, within OHPLBJKB_00680 at 697.690 kb on + strand, within OHPLBJKB_00680 at 697.691 kb on - strand, within OHPLBJKB_00680 at 697.706 kb on + strand, within OHPLBJKB_00680 at 697.706 kb on + strand, within OHPLBJKB_00680 at 697.717 kb on + strand, within OHPLBJKB_00680 at 697.717 kb on + strand, within OHPLBJKB_00680 at 697.718 kb on - strand, within OHPLBJKB_00680 at 697.720 kb on + strand, within OHPLBJKB_00680 at 697.721 kb on - strand, within OHPLBJKB_00680 at 697.721 kb on - strand, within OHPLBJKB_00680 at 697.753 kb on + strand, within OHPLBJKB_00680
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 695,419 - OHPLBJKB_00676 0.88 -1.0 695,595 + +0.6 695,595 + +0.2 695,595 + -1.3 695,595 + +0.1 695,596 - -1.4 695,596 - +1.0 695,596 - -0.2 695,596 - +0.2 695,603 - +0.0 695,681 + OHPLBJKB_00677 0.15 -0.6 695,705 + OHPLBJKB_00677 0.18 +0.5 695,706 - OHPLBJKB_00677 0.19 -0.2 695,707 + OHPLBJKB_00677 0.19 -0.1 695,708 - OHPLBJKB_00677 0.19 +0.1 695,708 - OHPLBJKB_00677 0.19 -0.3 695,708 - OHPLBJKB_00677 0.19 +1.0 695,708 - OHPLBJKB_00677 0.19 +0.6 695,799 + OHPLBJKB_00677 0.33 -0.0 695,925 + OHPLBJKB_00677 0.52 -0.3 695,926 - OHPLBJKB_00677 0.52 -0.4 695,943 - OHPLBJKB_00677 0.55 +1.1 695,979 + OHPLBJKB_00677 0.60 -0.6 695,979 + OHPLBJKB_00677 0.60 -1.3 695,980 - OHPLBJKB_00677 0.60 +1.0 695,980 - OHPLBJKB_00677 0.60 +0.6 696,109 + OHPLBJKB_00677 0.80 -0.2 696,110 - OHPLBJKB_00677 0.80 -1.0 696,110 - OHPLBJKB_00677 0.80 -0.0 696,110 - OHPLBJKB_00677 0.80 +0.6 696,110 - OHPLBJKB_00677 0.80 +0.8 696,120 - OHPLBJKB_00677 0.81 -0.9 696,120 - OHPLBJKB_00677 0.81 +0.4 696,121 + OHPLBJKB_00677 0.82 +0.6 696,121 + OHPLBJKB_00677 0.82 +0.4 696,121 + OHPLBJKB_00677 0.82 -0.2 696,122 - OHPLBJKB_00677 0.82 -0.5 696,122 - OHPLBJKB_00677 0.82 -1.0 696,179 + -0.3 696,180 - +0.1 696,180 - +0.6 696,180 - -0.9 696,180 - +0.1 696,266 - +0.6 696,278 + +1.6 696,291 - +0.0 696,291 - +0.9 696,303 - -0.2 696,348 + +0.1 696,348 + +0.6 696,349 - +0.1 696,377 + -0.6 696,377 + +1.1 696,377 + +1.8 696,389 + -1.2 696,390 - +1.1 696,390 - +0.3 696,390 - +0.0 696,390 - +0.6 696,390 - -0.2 696,539 + OHPLBJKB_00678 0.37 -0.8 696,539 + OHPLBJKB_00678 0.37 +0.8 696,540 - OHPLBJKB_00678 0.37 -0.4 696,540 - OHPLBJKB_00678 0.37 +0.9 696,540 - OHPLBJKB_00678 0.37 -1.8 696,619 + OHPLBJKB_00678 0.57 +0.8 696,619 + OHPLBJKB_00678 0.57 +0.1 696,620 - OHPLBJKB_00678 0.58 -1.0 696,620 - OHPLBJKB_00678 0.58 +0.1 696,620 - OHPLBJKB_00678 0.58 +1.0 696,620 - OHPLBJKB_00678 0.58 +0.1 696,620 - OHPLBJKB_00678 0.58 +0.1 696,645 + OHPLBJKB_00678 0.64 +0.0 696,645 + OHPLBJKB_00678 0.64 +0.2 696,776 + +0.6 696,791 + -0.9 696,861 + +0.2 696,861 + +1.4 696,861 + -1.0 696,861 + +1.4 696,862 - -0.7 696,862 - -0.6 696,862 - -1.2 696,886 - -1.5 696,932 + OHPLBJKB_00679 0.19 -0.0 696,932 + OHPLBJKB_00679 0.19 -0.2 696,932 + OHPLBJKB_00679 0.19 -2.2 696,932 + OHPLBJKB_00679 0.19 -0.5 696,932 + OHPLBJKB_00679 0.19 +0.4 696,933 - OHPLBJKB_00679 0.19 +0.8 696,933 - OHPLBJKB_00679 0.19 +1.4 696,933 - OHPLBJKB_00679 0.19 +0.4 697,133 + OHPLBJKB_00679 0.61 +0.8 697,168 + OHPLBJKB_00679 0.68 -0.7 697,231 + OHPLBJKB_00679 0.81 +0.3 697,231 + OHPLBJKB_00679 0.81 +0.9 697,253 + OHPLBJKB_00679 0.86 +0.6 697,254 - OHPLBJKB_00679 0.86 -0.2 697,304 + -0.4 697,304 + +0.4 697,304 + +0.4 697,304 + +1.1 697,304 + -0.6 697,304 + +0.2 697,305 - -0.5 697,305 - -0.1 697,305 - -0.1 697,305 - -2.7 697,305 - +0.3 697,342 + +0.8 697,344 + -0.6 697,345 - -0.2 697,371 + +0.5 697,371 + -0.4 697,372 - +0.6 697,387 + +0.6 697,387 + -1.3 697,387 + -0.7 697,387 + -0.3 697,387 + +0.0 697,387 + -0.3 697,387 + -0.2 697,388 - +0.6 697,389 + +0.6 697,389 + -0.7 697,389 + -1.1 697,389 + -1.2 697,389 + +0.4 697,389 + -0.9 697,390 - +0.5 697,390 - +1.3 697,390 - -0.2 697,415 + +0.6 697,415 + -0.3 697,441 + +0.4 697,447 + +0.1 697,447 + +0.1 697,448 - -1.7 697,479 + -1.4 697,546 + +0.9 697,546 + +0.0 697,546 + -1.2 697,546 + -1.2 697,546 + +0.8 697,546 + +1.3 697,546 + -1.1 697,546 + +0.1 697,547 - -0.2 697,547 - -0.1 697,547 - -0.9 697,547 - +0.6 697,547 - -0.6 697,547 - -1.1 697,594 + OHPLBJKB_00680 0.23 -0.5 697,594 + OHPLBJKB_00680 0.23 +0.2 697,595 - OHPLBJKB_00680 0.23 -1.4 697,603 + OHPLBJKB_00680 0.26 +0.9 697,603 + OHPLBJKB_00680 0.26 -0.1 697,603 + OHPLBJKB_00680 0.26 +1.1 697,604 - OHPLBJKB_00680 0.26 +0.1 697,615 - OHPLBJKB_00680 0.30 -2.9 697,629 + OHPLBJKB_00680 0.35 +0.1 697,648 + OHPLBJKB_00680 0.41 -0.7 697,648 + OHPLBJKB_00680 0.41 +1.6 697,648 + OHPLBJKB_00680 0.41 -0.3 697,648 + OHPLBJKB_00680 0.41 +0.1 697,649 - OHPLBJKB_00680 0.41 +0.3 697,649 - OHPLBJKB_00680 0.41 -1.0 697,654 + OHPLBJKB_00680 0.43 -0.3 697,688 + OHPLBJKB_00680 0.55 +0.3 697,690 + OHPLBJKB_00680 0.55 +1.1 697,691 - OHPLBJKB_00680 0.56 +1.6 697,706 + OHPLBJKB_00680 0.61 -0.8 697,706 + OHPLBJKB_00680 0.61 +1.1 697,717 + OHPLBJKB_00680 0.64 +1.4 697,717 + OHPLBJKB_00680 0.64 -0.2 697,718 - OHPLBJKB_00680 0.65 -1.0 697,720 + OHPLBJKB_00680 0.65 -1.4 697,721 - OHPLBJKB_00680 0.66 +0.7 697,721 - OHPLBJKB_00680 0.66 +0.6 697,753 + OHPLBJKB_00680 0.76 -0.4
Or see this region's nucleotide sequence