Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00263 and OHPLBJKB_00264 are separated by 223 nucleotides OHPLBJKB_00264 and OHPLBJKB_00265 are separated by 138 nucleotides OHPLBJKB_00265 and OHPLBJKB_00266 are separated by 3 nucleotides
OHPLBJKB_00263: OHPLBJKB_00263 - Quercetin 2,3-dioxygenase, at 284,220 to 284,915
_00263
OHPLBJKB_00264: OHPLBJKB_00264 - HTH-type transcriptional regulator GntR, at 285,139 to 286,134
_00264
OHPLBJKB_00265: OHPLBJKB_00265 - Thermoresistant gluconokinase, at 286,273 to 286,800
_00265
OHPLBJKB_00266: OHPLBJKB_00266 - Low-affinity gluconate transporter, at 286,804 to 288,144
_00266
Position (kb) 285
286
287 Strain fitness (log2 ratio) -2
-1
0
1
2 at 284.158 kb on - strand at 284.185 kb on + strand at 284.186 kb on - strand at 284.215 kb on + strand at 284.216 kb on - strand at 284.226 kb on + strand at 284.226 kb on + strand at 284.227 kb on - strand at 284.227 kb on - strand at 284.230 kb on + strand at 284.230 kb on + strand at 284.231 kb on - strand at 284.285 kb on + strand at 284.285 kb on + strand at 284.285 kb on + strand at 284.286 kb on - strand at 284.304 kb on + strand, within OHPLBJKB_00263 at 284.304 kb on + strand, within OHPLBJKB_00263 at 284.304 kb on + strand, within OHPLBJKB_00263 at 284.304 kb on + strand, within OHPLBJKB_00263 at 284.305 kb on - strand, within OHPLBJKB_00263 at 284.305 kb on - strand, within OHPLBJKB_00263 at 284.305 kb on - strand, within OHPLBJKB_00263 at 284.307 kb on + strand, within OHPLBJKB_00263 at 284.308 kb on - strand, within OHPLBJKB_00263 at 284.396 kb on + strand, within OHPLBJKB_00263 at 284.396 kb on + strand, within OHPLBJKB_00263 at 284.397 kb on - strand, within OHPLBJKB_00263 at 284.397 kb on - strand, within OHPLBJKB_00263 at 284.397 kb on - strand, within OHPLBJKB_00263 at 284.397 kb on - strand, within OHPLBJKB_00263 at 284.402 kb on + strand, within OHPLBJKB_00263 at 284.418 kb on + strand, within OHPLBJKB_00263 at 284.418 kb on + strand, within OHPLBJKB_00263 at 284.418 kb on + strand, within OHPLBJKB_00263 at 284.418 kb on + strand, within OHPLBJKB_00263 at 284.419 kb on - strand, within OHPLBJKB_00263 at 284.419 kb on - strand, within OHPLBJKB_00263 at 284.419 kb on - strand, within OHPLBJKB_00263 at 284.433 kb on - strand, within OHPLBJKB_00263 at 284.462 kb on + strand, within OHPLBJKB_00263 at 284.495 kb on + strand, within OHPLBJKB_00263 at 284.529 kb on + strand, within OHPLBJKB_00263 at 284.529 kb on + strand, within OHPLBJKB_00263 at 284.529 kb on + strand, within OHPLBJKB_00263 at 284.529 kb on + strand, within OHPLBJKB_00263 at 284.530 kb on - strand, within OHPLBJKB_00263 at 284.597 kb on + strand, within OHPLBJKB_00263 at 284.633 kb on - strand, within OHPLBJKB_00263 at 284.890 kb on + strand at 284.984 kb on + strand at 284.984 kb on + strand at 284.984 kb on + strand at 284.985 kb on - strand at 284.985 kb on - strand at 285.035 kb on + strand at 285.036 kb on - strand at 285.036 kb on - strand at 285.036 kb on - strand at 285.036 kb on - strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.040 kb on + strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.041 kb on - strand at 285.042 kb on + strand at 285.042 kb on + strand at 285.042 kb on + strand at 285.046 kb on + strand at 285.046 kb on + strand at 285.047 kb on - strand at 285.116 kb on - strand at 285.158 kb on + strand at 285.159 kb on - strand at 285.183 kb on - strand at 285.246 kb on - strand, within OHPLBJKB_00264 at 285.283 kb on + strand, within OHPLBJKB_00264 at 285.284 kb on - strand, within OHPLBJKB_00264 at 285.286 kb on - strand, within OHPLBJKB_00264 at 285.348 kb on - strand, within OHPLBJKB_00264 at 285.381 kb on - strand, within OHPLBJKB_00264 at 285.439 kb on + strand, within OHPLBJKB_00264 at 285.445 kb on + strand, within OHPLBJKB_00264 at 285.447 kb on + strand, within OHPLBJKB_00264 at 285.522 kb on + strand, within OHPLBJKB_00264 at 285.542 kb on + strand, within OHPLBJKB_00264 at 285.542 kb on + strand, within OHPLBJKB_00264 at 285.542 kb on + strand, within OHPLBJKB_00264 at 285.717 kb on + strand, within OHPLBJKB_00264 at 285.717 kb on + strand, within OHPLBJKB_00264 at 285.717 kb on + strand, within OHPLBJKB_00264 at 285.717 kb on + strand, within OHPLBJKB_00264 at 285.717 kb on + strand, within OHPLBJKB_00264 at 285.718 kb on - strand, within OHPLBJKB_00264 at 285.718 kb on - strand, within OHPLBJKB_00264 at 285.718 kb on - strand, within OHPLBJKB_00264 at 285.718 kb on - strand, within OHPLBJKB_00264 at 285.720 kb on + strand, within OHPLBJKB_00264 at 285.720 kb on + strand, within OHPLBJKB_00264 at 285.720 kb on + strand, within OHPLBJKB_00264 at 285.721 kb on - strand, within OHPLBJKB_00264 at 285.777 kb on + strand, within OHPLBJKB_00264 at 285.777 kb on + strand, within OHPLBJKB_00264 at 285.778 kb on - strand, within OHPLBJKB_00264 at 285.778 kb on - strand, within OHPLBJKB_00264 at 285.805 kb on + strand, within OHPLBJKB_00264 at 285.806 kb on - strand, within OHPLBJKB_00264 at 285.873 kb on + strand, within OHPLBJKB_00264 at 286.100 kb on + strand at 286.128 kb on + strand at 286.128 kb on + strand at 286.151 kb on + strand at 286.151 kb on + strand at 286.151 kb on + strand at 286.152 kb on - strand at 286.162 kb on + strand at 286.162 kb on + strand at 286.162 kb on + strand at 286.162 kb on + strand at 286.163 kb on - strand at 286.163 kb on - strand at 286.163 kb on - strand at 286.164 kb on + strand at 286.164 kb on + strand at 286.165 kb on - strand at 286.165 kb on - strand at 286.165 kb on - strand at 286.170 kb on + strand at 286.171 kb on - strand at 286.256 kb on - strand at 286.303 kb on + strand at 286.303 kb on + strand at 286.303 kb on + strand at 286.303 kb on + strand at 286.303 kb on + strand at 286.303 kb on + strand at 286.304 kb on - strand at 286.304 kb on - strand at 286.304 kb on - strand at 286.304 kb on - strand at 286.304 kb on - strand at 286.304 kb on - strand at 286.509 kb on + strand, within OHPLBJKB_00265 at 286.512 kb on + strand, within OHPLBJKB_00265 at 286.512 kb on + strand, within OHPLBJKB_00265 at 286.512 kb on + strand, within OHPLBJKB_00265 at 286.513 kb on - strand, within OHPLBJKB_00265 at 286.513 kb on - strand, within OHPLBJKB_00265 at 286.513 kb on - strand, within OHPLBJKB_00265 at 286.513 kb on - strand, within OHPLBJKB_00265 at 286.553 kb on - strand, within OHPLBJKB_00265 at 286.575 kb on + strand, within OHPLBJKB_00265 at 286.597 kb on + strand, within OHPLBJKB_00265 at 286.724 kb on + strand, within OHPLBJKB_00265 at 286.724 kb on + strand, within OHPLBJKB_00265 at 286.725 kb on - strand, within OHPLBJKB_00265 at 286.725 kb on - strand, within OHPLBJKB_00265 at 286.725 kb on - strand, within OHPLBJKB_00265 at 286.725 kb on - strand, within OHPLBJKB_00265 at 286.725 kb on - strand, within OHPLBJKB_00265 at 286.798 kb on + strand at 286.798 kb on + strand at 286.799 kb on - strand at 286.799 kb on - strand at 286.799 kb on - strand at 286.802 kb on + strand at 286.802 kb on + strand at 286.802 kb on + strand at 286.809 kb on + strand at 286.809 kb on + strand at 286.810 kb on - strand at 286.810 kb on - strand at 286.836 kb on - strand at 286.848 kb on - strand at 286.848 kb on - strand at 286.862 kb on + strand at 286.862 kb on + strand at 286.863 kb on - strand at 286.863 kb on - strand at 286.879 kb on - strand at 286.879 kb on - strand at 287.022 kb on + strand, within OHPLBJKB_00266 at 287.022 kb on + strand, within OHPLBJKB_00266 at 287.023 kb on - strand, within OHPLBJKB_00266 at 287.023 kb on - strand, within OHPLBJKB_00266 at 287.023 kb on - strand, within OHPLBJKB_00266 at 287.039 kb on + strand, within OHPLBJKB_00266 at 287.039 kb on + strand, within OHPLBJKB_00266 at 287.039 kb on + strand, within OHPLBJKB_00266 at 287.040 kb on - strand, within OHPLBJKB_00266 at 287.040 kb on - strand, within OHPLBJKB_00266 at 287.040 kb on - strand, within OHPLBJKB_00266 at 287.040 kb on - strand, within OHPLBJKB_00266 at 287.040 kb on - strand, within OHPLBJKB_00266 at 287.040 kb on - strand, within OHPLBJKB_00266
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 284,158 - -1.1 284,185 + -0.0 284,186 - +0.0 284,215 + +0.8 284,216 - -1.8 284,226 + -0.7 284,226 + -0.5 284,227 - +1.0 284,227 - -0.5 284,230 + -0.0 284,230 + -0.4 284,231 - -0.7 284,285 + +1.4 284,285 + +0.4 284,285 + +0.4 284,286 - -0.8 284,304 + OHPLBJKB_00263 0.12 +0.0 284,304 + OHPLBJKB_00263 0.12 -0.4 284,304 + OHPLBJKB_00263 0.12 -0.7 284,304 + OHPLBJKB_00263 0.12 -0.1 284,305 - OHPLBJKB_00263 0.12 -1.4 284,305 - OHPLBJKB_00263 0.12 -1.0 284,305 - OHPLBJKB_00263 0.12 -2.0 284,307 + OHPLBJKB_00263 0.12 -1.6 284,308 - OHPLBJKB_00263 0.13 -0.9 284,396 + OHPLBJKB_00263 0.25 -1.0 284,396 + OHPLBJKB_00263 0.25 -0.8 284,397 - OHPLBJKB_00263 0.25 -0.2 284,397 - OHPLBJKB_00263 0.25 +0.7 284,397 - OHPLBJKB_00263 0.25 +1.3 284,397 - OHPLBJKB_00263 0.25 +0.3 284,402 + OHPLBJKB_00263 0.26 -0.2 284,418 + OHPLBJKB_00263 0.28 +0.2 284,418 + OHPLBJKB_00263 0.28 -0.0 284,418 + OHPLBJKB_00263 0.28 +0.3 284,418 + OHPLBJKB_00263 0.28 +0.1 284,419 - OHPLBJKB_00263 0.29 +0.4 284,419 - OHPLBJKB_00263 0.29 -1.3 284,419 - OHPLBJKB_00263 0.29 -0.7 284,433 - OHPLBJKB_00263 0.31 -0.4 284,462 + OHPLBJKB_00263 0.35 +0.3 284,495 + OHPLBJKB_00263 0.40 -0.7 284,529 + OHPLBJKB_00263 0.44 -0.4 284,529 + OHPLBJKB_00263 0.44 -0.6 284,529 + OHPLBJKB_00263 0.44 -1.2 284,529 + OHPLBJKB_00263 0.44 -0.0 284,530 - OHPLBJKB_00263 0.45 +0.1 284,597 + OHPLBJKB_00263 0.54 +0.1 284,633 - OHPLBJKB_00263 0.59 +1.3 284,890 + -0.7 284,984 + +1.5 284,984 + -0.3 284,984 + -0.5 284,985 - +1.0 284,985 - -0.8 285,035 + -0.4 285,036 - -2.4 285,036 - -0.0 285,036 - +0.4 285,036 - +0.3 285,040 + +0.1 285,040 + +1.1 285,040 + +1.1 285,040 + -0.7 285,040 + +0.2 285,040 + +0.7 285,040 + +2.2 285,040 + +2.0 285,040 + +1.3 285,040 + -1.0 285,041 - -1.3 285,041 - -0.7 285,041 - +0.8 285,041 - -1.2 285,041 - -0.3 285,041 - +1.3 285,041 - +0.0 285,041 - +0.3 285,041 - +0.5 285,041 - +0.5 285,041 - +0.3 285,041 - -0.9 285,042 + +0.3 285,042 + -1.0 285,042 + -0.3 285,046 + -0.1 285,046 + +1.0 285,047 - -1.5 285,116 - -0.3 285,158 + -2.0 285,159 - +1.1 285,183 - -0.4 285,246 - OHPLBJKB_00264 0.11 -1.8 285,283 + OHPLBJKB_00264 0.14 -0.1 285,284 - OHPLBJKB_00264 0.15 +0.3 285,286 - OHPLBJKB_00264 0.15 -0.0 285,348 - OHPLBJKB_00264 0.21 -0.2 285,381 - OHPLBJKB_00264 0.24 -0.8 285,439 + OHPLBJKB_00264 0.30 -0.8 285,445 + OHPLBJKB_00264 0.31 -0.3 285,447 + OHPLBJKB_00264 0.31 -1.3 285,522 + OHPLBJKB_00264 0.38 -1.2 285,542 + OHPLBJKB_00264 0.40 -1.0 285,542 + OHPLBJKB_00264 0.40 +0.1 285,542 + OHPLBJKB_00264 0.40 -0.2 285,717 + OHPLBJKB_00264 0.58 -0.9 285,717 + OHPLBJKB_00264 0.58 -1.4 285,717 + OHPLBJKB_00264 0.58 -0.3 285,717 + OHPLBJKB_00264 0.58 -0.5 285,717 + OHPLBJKB_00264 0.58 +0.7 285,718 - OHPLBJKB_00264 0.58 -1.0 285,718 - OHPLBJKB_00264 0.58 -0.9 285,718 - OHPLBJKB_00264 0.58 +0.2 285,718 - OHPLBJKB_00264 0.58 +0.4 285,720 + OHPLBJKB_00264 0.58 +1.9 285,720 + OHPLBJKB_00264 0.58 +0.3 285,720 + OHPLBJKB_00264 0.58 -1.7 285,721 - OHPLBJKB_00264 0.58 -1.1 285,777 + OHPLBJKB_00264 0.64 -2.5 285,777 + OHPLBJKB_00264 0.64 -0.5 285,778 - OHPLBJKB_00264 0.64 -0.3 285,778 - OHPLBJKB_00264 0.64 +0.2 285,805 + OHPLBJKB_00264 0.67 -2.0 285,806 - OHPLBJKB_00264 0.67 -0.0 285,873 + OHPLBJKB_00264 0.74 -1.5 286,100 + -1.4 286,128 + +0.2 286,128 + -0.8 286,151 + -0.5 286,151 + -0.2 286,151 + +0.1 286,152 - +0.9 286,162 + +0.4 286,162 + -0.9 286,162 + -0.9 286,162 + -0.4 286,163 - -0.5 286,163 - +0.1 286,163 - -0.9 286,164 + -0.3 286,164 + -0.5 286,165 - -0.4 286,165 - -1.6 286,165 - -1.4 286,170 + +0.2 286,171 - -0.0 286,256 - +0.8 286,303 + -1.1 286,303 + +2.3 286,303 + -0.7 286,303 + -0.8 286,303 + -0.5 286,303 + -0.2 286,304 - +1.3 286,304 - +0.3 286,304 - -1.7 286,304 - +0.3 286,304 - -2.1 286,304 - -0.1 286,509 + OHPLBJKB_00265 0.45 -1.4 286,512 + OHPLBJKB_00265 0.45 -1.9 286,512 + OHPLBJKB_00265 0.45 -1.2 286,512 + OHPLBJKB_00265 0.45 +0.5 286,513 - OHPLBJKB_00265 0.45 +1.3 286,513 - OHPLBJKB_00265 0.45 +1.1 286,513 - OHPLBJKB_00265 0.45 -0.7 286,513 - OHPLBJKB_00265 0.45 -0.3 286,553 - OHPLBJKB_00265 0.53 +1.7 286,575 + OHPLBJKB_00265 0.57 -0.6 286,597 + OHPLBJKB_00265 0.61 +0.6 286,724 + OHPLBJKB_00265 0.85 +0.5 286,724 + OHPLBJKB_00265 0.85 -0.7 286,725 - OHPLBJKB_00265 0.86 -0.5 286,725 - OHPLBJKB_00265 0.86 -0.7 286,725 - OHPLBJKB_00265 0.86 +1.3 286,725 - OHPLBJKB_00265 0.86 +0.7 286,725 - OHPLBJKB_00265 0.86 +1.4 286,798 + -0.1 286,798 + -0.7 286,799 - +0.4 286,799 - +1.7 286,799 - -0.8 286,802 + +0.9 286,802 + +0.0 286,802 + +0.7 286,809 + +0.3 286,809 + +0.2 286,810 - +0.6 286,810 - +1.1 286,836 - -0.5 286,848 - -0.9 286,848 - +0.3 286,862 + -1.1 286,862 + +0.9 286,863 - -0.6 286,863 - +1.3 286,879 - +1.0 286,879 - +0.9 287,022 + OHPLBJKB_00266 0.16 -2.3 287,022 + OHPLBJKB_00266 0.16 +0.0 287,023 - OHPLBJKB_00266 0.16 -0.4 287,023 - OHPLBJKB_00266 0.16 +0.7 287,023 - OHPLBJKB_00266 0.16 -2.4 287,039 + OHPLBJKB_00266 0.18 -0.9 287,039 + OHPLBJKB_00266 0.18 +0.2 287,039 + OHPLBJKB_00266 0.18 -0.2 287,040 - OHPLBJKB_00266 0.18 -1.6 287,040 - OHPLBJKB_00266 0.18 -1.7 287,040 - OHPLBJKB_00266 0.18 +0.4 287,040 - OHPLBJKB_00266 0.18 -1.5 287,040 - OHPLBJKB_00266 0.18 -1.6 287,040 - OHPLBJKB_00266 0.18 -0.0
Or see this region's nucleotide sequence