Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS23445

Experiment: Experiment:TE2, Cucumber 4 Petiole 1 (TE2-S-C4-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Petiole 1 (TE2-S-C4-P1)
4,473,727	+		LU632_RS23440	0.60	-0.3
4,473,727	+		LU632_RS23440	0.60	-0.2
4,473,727	+		LU632_RS23440	0.60	-0.1
4,473,866	-				-1.2
4,473,866	-				-0.2
4,474,222	+		LU632_RS23445	0.56	-2.9
4,474,286	-		LU632_RS23445	0.72	-2.3
4,474,570	+				+3.3
4,474,570	+				-1.1
4,474,571	-				+1.1
4,474,571	-				-2.2
4,474,581	-				-0.5
4,474,581	-				-2.2
4,474,678	-				-1.0
4,474,679	+				+1.0
4,474,680	-				-0.3
4,474,820	+				-2.2
4,474,821	-				+1.8
4,474,821	-				-0.3
4,474,855	+				+1.7
4,474,860	+				-1.8
4,474,860	+				-0.3
4,474,873	+				-1.3
4,474,886	+				+0.7
4,474,901	-				-1.5
4,474,959	+				+2.2
4,474,960	-				-0.3
4,474,967	+				+0.9
4,475,038	+				+0.8
4,475,039	-				-1.8
4,475,058	+				-0.8
4,475,058	+				+0.3
4,475,059	-				+1.0
4,475,059	-				+1.2