Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS14845

Experiment: Experiment:TE2, Cucumber 4 Petiole 1 (TE2-S-C4-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Petiole 1 (TE2-S-C4-P1)
2,819,846	-	plsX	LU632_RS14835	0.39	-0.3
2,819,846	-	plsX	LU632_RS14835	0.39	-1.5
2,819,846	-	plsX	LU632_RS14835	0.39	+0.2
2,819,925	-	plsX	LU632_RS14835	0.47	-2.8
2,819,952	-	plsX	LU632_RS14835	0.49	-2.2
2,820,124	-	plsX	LU632_RS14835	0.66	-3.1
2,820,124	-	plsX	LU632_RS14835	0.66	-0.8
2,820,124	-	plsX	LU632_RS14835	0.66	-2.8
2,820,168	-	plsX	LU632_RS14835	0.70	-1.1
2,820,330	-	plsX	LU632_RS14835	0.86	+0.4
2,820,506	-				+1.2
2,820,891	-	yceD	LU632_RS14845	0.39	-1.8
2,821,131	-	yceD	LU632_RS14845	0.85	-1.9
2,821,330	+				-1.9
2,821,485	+		LU632_RS14850	0.23	-1.1
2,821,486	-		LU632_RS14850	0.23	+4.5
2,821,540	+		LU632_RS14850	0.33	+2.8
2,821,541	-		LU632_RS14850	0.33	-2.1
2,821,541	-		LU632_RS14850	0.33	+0.2
2,821,560	+		LU632_RS14850	0.36	+1.7
2,821,561	-		LU632_RS14850	0.36	+1.3
2,821,614	-		LU632_RS14850	0.45	-1.2
2,821,623	+		LU632_RS14850	0.47	+0.5
2,821,696	+		LU632_RS14850	0.59	+0.2
2,821,697	-		LU632_RS14850	0.59	+0.9
2,821,760	+		LU632_RS14850	0.70	+2.8
2,821,760	+		LU632_RS14850	0.70	+2.0
2,821,760	+		LU632_RS14850	0.70	+0.7
2,821,761	-		LU632_RS14850	0.70	+0.4
2,821,801	+		LU632_RS14850	0.77	+1.6
2,821,879	+				+1.2
2,821,931	+				+0.2
2,821,935	+				+0.6
2,821,935	+				-2.3
2,821,936	-				+2.4
2,821,965	+				+1.2
2,821,977	+				-2.7
2,822,045	+				-1.1
2,822,197	+	rluC	LU632_RS14855	0.23	+1.2
2,822,201	+	rluC	LU632_RS14855	0.23	-2.3
2,822,201	+	rluC	LU632_RS14855	0.23	+1.7
2,822,202	-	rluC	LU632_RS14855	0.23	+0.5
2,822,202	-	rluC	LU632_RS14855	0.23	-1.6
2,822,202	-	rluC	LU632_RS14855	0.23	+0.9