Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS04255

Experiment: Experiment:TE2, Cucumber 4 Petiole 1 (TE2-S-C4-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 4 Petiole 1 (TE2-S-C4-P1)
845,454	+				-1.1
845,563	+	yiaK	LU632_RS04250	0.16	-0.9
845,564	-	yiaK	LU632_RS04250	0.16	-2.9
845,699	-	yiaK	LU632_RS04250	0.29	-3.7
845,923	+	yiaK	LU632_RS04250	0.52	-0.9
846,021	-	yiaK	LU632_RS04250	0.61	-1.9
846,097	+	yiaK	LU632_RS04250	0.69	-2.1
846,130	+	yiaK	LU632_RS04250	0.72	-3.6
846,434	+				-2.3
846,489	+		LU632_RS04255	0.15	-0.1
846,490	-		LU632_RS04255	0.15	-1.9
846,636	+		LU632_RS04255	0.46	-0.3
846,636	+		LU632_RS04255	0.46	-2.1
846,821	+		LU632_RS04255	0.86	+0.5
846,821	+		LU632_RS04255	0.86	+0.5
846,901	+				-0.5
846,901	+				+0.8
846,902	-				-0.4
846,913	-				-0.9
846,985	+				-0.1
846,995	-				-3.1
847,002	-				-1.2
847,578	+		LU632_RS04260	0.52	-2.2
847,579	-		LU632_RS04260	0.52	-2.2
847,646	-		LU632_RS04260	0.57	-2.1
847,664	+		LU632_RS04260	0.59	+1.5
847,688	-		LU632_RS04260	0.61	-3.1