Strain Fitness in Bacteroides stercoris CC31F around HMPREF1181_RS00675

Experiment: Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Rhamnogalacturonan I from potato pectic fiber 2.5 mg/mL (C)
151,881	-				-0.5
151,961	-				-0.2
151,971	+				+0.3
151,971	+				+0.0
151,978	-				+0.1
152,087	+		HMPREF1181_RS00675	0.19	-0.5
152,087	+		HMPREF1181_RS00675	0.19	+0.2
152,226	+		HMPREF1181_RS00675	0.43	-0.3
152,227	-		HMPREF1181_RS00675	0.43	-0.7
152,227	-		HMPREF1181_RS00675	0.43	-0.4
152,240	-		HMPREF1181_RS00675	0.46	-0.6
152,276	+		HMPREF1181_RS00675	0.52	+0.0
152,277	-		HMPREF1181_RS00675	0.52	-0.6
152,277	-		HMPREF1181_RS00675	0.52	-0.3
152,334	+		HMPREF1181_RS00675	0.62	-0.5
152,519	+				+0.3
152,520	-				-0.5
152,520	-				-0.0
152,526	-				-0.7
152,531	-				-0.5
152,562	+				+0.3
152,585	+				-0.2
152,732	-				+0.4
152,736	-				-0.9
152,736	-				-0.6
152,748	+				+0.2
152,748	+				+0.2
152,749	-				-0.3
152,899	+				-0.1
152,900	-				+0.5
152,901	+				+0.6
152,901	+				+0.2
152,901	+				-0.5
152,901	+				+0.7
152,901	+				+1.1
152,902	-				-0.3
152,902	-				-0.2
152,902	-				-0.0
152,943	+				+0.1
153,026	+				+0.3
153,036	+				+0.6
153,157	-				-0.2
153,225	+				+0.8
153,226	-				-0.2
153,241	+				+0.5
153,304	-				+0.4
153,433	-		HMPREF1181_RS00680	0.27	+0.7
153,461	+		HMPREF1181_RS00680	0.33	+0.5
153,465	+		HMPREF1181_RS00680	0.34	+0.1
153,489	+		HMPREF1181_RS00680	0.39	+0.5
153,511	-		HMPREF1181_RS00680	0.43	-0.9
153,543	-		HMPREF1181_RS00680	0.50	-0.3
153,543	-		HMPREF1181_RS00680	0.50	-0.1