Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_04150

Experiment: K5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOHPLBJKB_04148 and OHPLBJKB_04149 are separated by 9 nucleotidesOHPLBJKB_04149 and OHPLBJKB_04150 are separated by 300 nucleotidesOHPLBJKB_04150 and OHPLBJKB_04151 are separated by 10 nucleotides OHPLBJKB_04148: OHPLBJKB_04148 - Rhamnulose-1-phosphate aldolase, at 4,363,534 to 4,364,358 _04148 OHPLBJKB_04149: OHPLBJKB_04149 - L-rhamnose mutarotase, at 4,364,368 to 4,364,682 _04149 OHPLBJKB_04150: OHPLBJKB_04150 - PTS system fructose-specific EIIABC component, at 4,364,983 to 4,365,429 _04150 OHPLBJKB_04151: OHPLBJKB_04151 - PTS system mannose-specific EIIBCA component, at 4,365,440 to 4,366,891 _04151 Position (kb) 4364 4365 4366Strain fitness (log2 ratio) -2 -1 0 1at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.987 kb on + strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.988 kb on - strand, within OHPLBJKB_04148at 4363.991 kb on + strand, within OHPLBJKB_04148at 4363.991 kb on + strand, within OHPLBJKB_04148at 4363.992 kb on - strand, within OHPLBJKB_04148at 4363.992 kb on - strand, within OHPLBJKB_04148at 4363.992 kb on - strand, within OHPLBJKB_04148at 4363.992 kb on - strand, within OHPLBJKB_04148at 4364.057 kb on + strand, within OHPLBJKB_04148at 4364.243 kb on + strand, within OHPLBJKB_04148at 4364.243 kb on + strand, within OHPLBJKB_04148at 4364.244 kb on - strand, within OHPLBJKB_04148at 4364.244 kb on - strand, within OHPLBJKB_04148at 4364.244 kb on - strand, within OHPLBJKB_04148at 4364.244 kb on - strand, within OHPLBJKB_04148at 4364.244 kb on - strand, within OHPLBJKB_04148at 4364.356 kb on + strandat 4364.420 kb on - strand, within OHPLBJKB_04149at 4364.420 kb on - strand, within OHPLBJKB_04149at 4364.484 kb on + strand, within OHPLBJKB_04149at 4364.484 kb on + strand, within OHPLBJKB_04149at 4364.485 kb on - strand, within OHPLBJKB_04149at 4364.485 kb on - strand, within OHPLBJKB_04149at 4364.488 kb on + strand, within OHPLBJKB_04149at 4364.488 kb on + strand, within OHPLBJKB_04149at 4364.489 kb on - strand, within OHPLBJKB_04149at 4364.497 kb on + strand, within OHPLBJKB_04149at 4364.497 kb on + strand, within OHPLBJKB_04149at 4364.602 kb on + strand, within OHPLBJKB_04149at 4364.602 kb on + strand, within OHPLBJKB_04149at 4364.602 kb on + strand, within OHPLBJKB_04149at 4364.603 kb on - strand, within OHPLBJKB_04149at 4364.603 kb on - strand, within OHPLBJKB_04149at 4364.603 kb on - strand, within OHPLBJKB_04149at 4364.603 kb on - strand, within OHPLBJKB_04149at 4364.603 kb on - strand, within OHPLBJKB_04149at 4364.604 kb on + strand, within OHPLBJKB_04149at 4364.604 kb on + strand, within OHPLBJKB_04149at 4364.605 kb on - strand, within OHPLBJKB_04149at 4364.747 kb on + strandat 4364.748 kb on - strandat 4364.770 kb on - strandat 4364.792 kb on - strandat 4364.836 kb on + strandat 4364.836 kb on + strandat 4364.841 kb on - strandat 4364.851 kb on + strandat 4364.914 kb on + strandat 4364.995 kb on - strandat 4365.085 kb on - strand, within OHPLBJKB_04150at 4365.206 kb on + strand, within OHPLBJKB_04150at 4365.232 kb on - strand, within OHPLBJKB_04150at 4365.407 kb on + strandat 4365.408 kb on - strandat 4365.408 kb on - strandat 4365.408 kb on - strandat 4365.453 kb on + strandat 4365.454 kb on - strandat 4365.454 kb on - strandat 4365.457 kb on + strandat 4365.457 kb on + strandat 4365.457 kb on + strandat 4365.457 kb on + strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.458 kb on - strandat 4365.500 kb on + strandat 4365.500 kb on + strandat 4365.500 kb on + strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.501 kb on - strandat 4365.547 kb on + strandat 4365.552 kb on + strandat 4365.552 kb on + strandat 4365.552 kb on + strandat 4365.552 kb on + strandat 4365.623 kb on + strand, within OHPLBJKB_04151at 4365.623 kb on + strand, within OHPLBJKB_04151at 4365.881 kb on - strand, within OHPLBJKB_04151at 4365.927 kb on - strand, within OHPLBJKB_04151at 4365.927 kb on - strand, within OHPLBJKB_04151at 4365.935 kb on - strand, within OHPLBJKB_04151at 4365.966 kb on + strand, within OHPLBJKB_04151at 4365.967 kb on - strand, within OHPLBJKB_04151at 4366.022 kb on + strand, within OHPLBJKB_04151at 4366.022 kb on + strand, within OHPLBJKB_04151at 4366.022 kb on + strand, within OHPLBJKB_04151at 4366.022 kb on + strand, within OHPLBJKB_04151at 4366.022 kb on + strand, within OHPLBJKB_04151at 4366.023 kb on - strand, within OHPLBJKB_04151at 4366.023 kb on - strand, within OHPLBJKB_04151at 4366.023 kb on - strand, within OHPLBJKB_04151at 4366.023 kb on - strand, within OHPLBJKB_04151at 4366.024 kb on + strand, within OHPLBJKB_04151at 4366.024 kb on + strand, within OHPLBJKB_04151at 4366.025 kb on - strand, within OHPLBJKB_04151at 4366.206 kb on + strand, within OHPLBJKB_04151at 4366.206 kb on + strand, within OHPLBJKB_04151at 4366.207 kb on - strand, within OHPLBJKB_04151at 4366.207 kb on - strand, within OHPLBJKB_04151at 4366.207 kb on - strand, within OHPLBJKB_04151at 4366.207 kb on - strand, within OHPLBJKB_04151at 4366.271 kb on + strand, within OHPLBJKB_04151at 4366.274 kb on + strand, within OHPLBJKB_04151at 4366.274 kb on + strand, within OHPLBJKB_04151at 4366.274 kb on + strand, within OHPLBJKB_04151at 4366.274 kb on + strand, within OHPLBJKB_04151at 4366.274 kb on + strand, within OHPLBJKB_04151at 4366.274 kb on + strand, within OHPLBJKB_04151at 4366.274 kb on + strand, within OHPLBJKB_04151at 4366.275 kb on - strand, within OHPLBJKB_04151at 4366.275 kb on - strand, within OHPLBJKB_04151at 4366.275 kb on - strand, within OHPLBJKB_04151at 4366.275 kb on - strand, within OHPLBJKB_04151at 4366.330 kb on + strand, within OHPLBJKB_04151

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Per-strain Table

Position Strand Gene LocusTag Fraction K5
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4,363,987 + OHPLBJKB_04148 0.55 -1.1
4,363,987 + OHPLBJKB_04148 0.55 -1.0
4,363,987 + OHPLBJKB_04148 0.55 -0.2
4,363,987 + OHPLBJKB_04148 0.55 +0.5
4,363,987 + OHPLBJKB_04148 0.55 -0.3
4,363,987 + OHPLBJKB_04148 0.55 -0.0
4,363,987 + OHPLBJKB_04148 0.55 -0.3
4,363,987 + OHPLBJKB_04148 0.55 +1.3
4,363,987 + OHPLBJKB_04148 0.55 +0.1
4,363,987 + OHPLBJKB_04148 0.55 -0.4
4,363,987 + OHPLBJKB_04148 0.55 +0.3
4,363,987 + OHPLBJKB_04148 0.55 +0.4
4,363,987 + OHPLBJKB_04148 0.55 +0.9
4,363,987 + OHPLBJKB_04148 0.55 -0.3
4,363,988 - OHPLBJKB_04148 0.55 +0.3
4,363,988 - OHPLBJKB_04148 0.55 +0.0
4,363,988 - OHPLBJKB_04148 0.55 -0.7
4,363,988 - OHPLBJKB_04148 0.55 +0.2
4,363,988 - OHPLBJKB_04148 0.55 +1.7
4,363,988 - OHPLBJKB_04148 0.55 +0.7
4,363,988 - OHPLBJKB_04148 0.55 -1.0
4,363,988 - OHPLBJKB_04148 0.55 +0.5
4,363,991 + OHPLBJKB_04148 0.55 -0.3
4,363,991 + OHPLBJKB_04148 0.55 -0.9
4,363,992 - OHPLBJKB_04148 0.56 +0.1
4,363,992 - OHPLBJKB_04148 0.56 -0.9
4,363,992 - OHPLBJKB_04148 0.56 +0.5
4,363,992 - OHPLBJKB_04148 0.56 -0.7
4,364,057 + OHPLBJKB_04148 0.63 -0.5
4,364,243 + OHPLBJKB_04148 0.86 -0.1
4,364,243 + OHPLBJKB_04148 0.86 +0.8
4,364,244 - OHPLBJKB_04148 0.86 -1.5
4,364,244 - OHPLBJKB_04148 0.86 -0.1
4,364,244 - OHPLBJKB_04148 0.86 -0.1
4,364,244 - OHPLBJKB_04148 0.86 -0.6
4,364,244 - OHPLBJKB_04148 0.86 -1.1
4,364,356 + +0.5
4,364,420 - OHPLBJKB_04149 0.17 -1.0
4,364,420 - OHPLBJKB_04149 0.17 +0.3
4,364,484 + OHPLBJKB_04149 0.37 +0.7
4,364,484 + OHPLBJKB_04149 0.37 -0.4
4,364,485 - OHPLBJKB_04149 0.37 -0.6
4,364,485 - OHPLBJKB_04149 0.37 +0.5
4,364,488 + OHPLBJKB_04149 0.38 -0.4
4,364,488 + OHPLBJKB_04149 0.38 -1.1
4,364,489 - OHPLBJKB_04149 0.38 -0.1
4,364,497 + OHPLBJKB_04149 0.41 +1.1
4,364,497 + OHPLBJKB_04149 0.41 -0.3
4,364,602 + OHPLBJKB_04149 0.74 +0.2
4,364,602 + OHPLBJKB_04149 0.74 +0.1
4,364,602 + OHPLBJKB_04149 0.74 -0.4
4,364,603 - OHPLBJKB_04149 0.75 +0.5
4,364,603 - OHPLBJKB_04149 0.75 -0.5
4,364,603 - OHPLBJKB_04149 0.75 +1.0
4,364,603 - OHPLBJKB_04149 0.75 -0.2
4,364,603 - OHPLBJKB_04149 0.75 +0.4
4,364,604 + OHPLBJKB_04149 0.75 -0.9
4,364,604 + OHPLBJKB_04149 0.75 +0.4
4,364,605 - OHPLBJKB_04149 0.75 -0.7
4,364,747 + -0.5
4,364,748 - +1.6
4,364,770 - -0.7
4,364,792 - -0.1
4,364,836 + -0.3
4,364,836 + -0.2
4,364,841 - -1.2
4,364,851 + -0.6
4,364,914 + -2.0
4,364,995 - +0.9
4,365,085 - OHPLBJKB_04150 0.23 +0.6
4,365,206 + OHPLBJKB_04150 0.50 -1.3
4,365,232 - OHPLBJKB_04150 0.56 +1.1
4,365,407 + +0.4
4,365,408 - +0.5
4,365,408 - +0.7
4,365,408 - -0.7
4,365,453 + -0.6
4,365,454 - +0.5
4,365,454 - -0.2
4,365,457 + +0.0
4,365,457 + -0.4
4,365,457 + -0.4
4,365,457 + +0.3
4,365,458 - +0.5
4,365,458 - -0.4
4,365,458 - -0.9
4,365,458 - +1.5
4,365,458 - -0.3
4,365,458 - +0.6
4,365,458 - +1.7
4,365,458 - -2.1
4,365,458 - -0.0
4,365,458 - +0.4
4,365,500 + -0.3
4,365,500 + +0.5
4,365,500 + +0.3
4,365,501 - +0.6
4,365,501 - +0.1
4,365,501 - -0.1
4,365,501 - -0.8
4,365,501 - +0.1
4,365,501 - -0.7
4,365,501 - -0.1
4,365,501 - +0.1
4,365,501 - +0.7
4,365,501 - -1.2
4,365,547 + -0.2
4,365,552 + -0.0
4,365,552 + -0.1
4,365,552 + -0.4
4,365,552 + -0.1
4,365,623 + OHPLBJKB_04151 0.13 +0.6
4,365,623 + OHPLBJKB_04151 0.13 -0.1
4,365,881 - OHPLBJKB_04151 0.30 +0.8
4,365,927 - OHPLBJKB_04151 0.34 -0.1
4,365,927 - OHPLBJKB_04151 0.34 +0.0
4,365,935 - OHPLBJKB_04151 0.34 +0.3
4,365,966 + OHPLBJKB_04151 0.36 +0.3
4,365,967 - OHPLBJKB_04151 0.36 -0.1
4,366,022 + OHPLBJKB_04151 0.40 +0.3
4,366,022 + OHPLBJKB_04151 0.40 +1.2
4,366,022 + OHPLBJKB_04151 0.40 -0.5
4,366,022 + OHPLBJKB_04151 0.40 -0.6
4,366,022 + OHPLBJKB_04151 0.40 +0.7
4,366,023 - OHPLBJKB_04151 0.40 -0.1
4,366,023 - OHPLBJKB_04151 0.40 +1.7
4,366,023 - OHPLBJKB_04151 0.40 +0.1
4,366,023 - OHPLBJKB_04151 0.40 +0.7
4,366,024 + OHPLBJKB_04151 0.40 -0.3
4,366,024 + OHPLBJKB_04151 0.40 -1.6
4,366,025 - OHPLBJKB_04151 0.40 +0.7
4,366,206 + OHPLBJKB_04151 0.53 -0.9
4,366,206 + OHPLBJKB_04151 0.53 -0.5
4,366,207 - OHPLBJKB_04151 0.53 +0.2
4,366,207 - OHPLBJKB_04151 0.53 +0.2
4,366,207 - OHPLBJKB_04151 0.53 +0.5
4,366,207 - OHPLBJKB_04151 0.53 +1.1
4,366,271 + OHPLBJKB_04151 0.57 -1.2
4,366,274 + OHPLBJKB_04151 0.57 +0.4
4,366,274 + OHPLBJKB_04151 0.57 -0.7
4,366,274 + OHPLBJKB_04151 0.57 -0.6
4,366,274 + OHPLBJKB_04151 0.57 -0.0
4,366,274 + OHPLBJKB_04151 0.57 -1.1
4,366,274 + OHPLBJKB_04151 0.57 -0.4
4,366,274 + OHPLBJKB_04151 0.57 +0.6
4,366,275 - OHPLBJKB_04151 0.58 +0.3
4,366,275 - OHPLBJKB_04151 0.58 +1.1
4,366,275 - OHPLBJKB_04151 0.58 +0.4
4,366,275 - OHPLBJKB_04151 0.58 -0.4
4,366,330 + OHPLBJKB_04151 0.61 +0.7

Or see this region's nucleotide sequence