Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03627
Experiment: K5
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | K5 |
---|---|---|---|---|---|
remove | |||||
3,810,922 | - | +0.9 | |||
3,810,922 | - | -0.5 | |||
3,811,068 | + | +0.2 | |||
3,811,069 | - | +0.4 | |||
3,811,069 | - | +0.2 | |||
3,811,174 | - | OHPLBJKB_03627 | 0.19 | +0.2 | |
3,811,304 | + | OHPLBJKB_03627 | 0.34 | -0.1 | |
3,811,304 | + | OHPLBJKB_03627 | 0.34 | -0.2 | |
3,811,305 | - | OHPLBJKB_03627 | 0.34 | -0.4 | |
3,811,313 | - | OHPLBJKB_03627 | 0.35 | -0.2 | |
3,811,326 | + | OHPLBJKB_03627 | 0.36 | -0.6 | |
3,811,326 | + | OHPLBJKB_03627 | 0.36 | +1.6 | |
3,811,326 | + | OHPLBJKB_03627 | 0.36 | -2.7 | |
3,811,326 | + | OHPLBJKB_03627 | 0.36 | +0.9 | |
3,811,436 | + | OHPLBJKB_03627 | 0.48 | -0.7 | |
3,811,484 | + | OHPLBJKB_03627 | 0.53 | +0.8 | |
3,811,486 | + | OHPLBJKB_03627 | 0.54 | +0.8 | |
3,811,486 | + | OHPLBJKB_03627 | 0.54 | -0.3 | |
3,811,487 | - | OHPLBJKB_03627 | 0.54 | +1.0 | |
3,811,487 | - | OHPLBJKB_03627 | 0.54 | -0.0 | |
3,811,487 | - | OHPLBJKB_03627 | 0.54 | -1.1 | |
3,811,698 | + | OHPLBJKB_03627 | 0.77 | -0.1 |
Or see this region's nucleotide sequence