Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03472

Experiment: K5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	K5
3,628,489	+		OHPLBJKB_03470	0.23	-1.3
3,628,489	+		OHPLBJKB_03470	0.23	+0.8
3,628,490	-		OHPLBJKB_03470	0.23	+0.4
3,628,490	-		OHPLBJKB_03470	0.23	-1.0
3,628,493	+		OHPLBJKB_03470	0.23	-0.9
3,628,494	-		OHPLBJKB_03470	0.24	-1.6
3,628,574	-		OHPLBJKB_03470	0.35	-0.8
3,628,579	+		OHPLBJKB_03470	0.36	-0.5
3,628,580	-		OHPLBJKB_03470	0.36	-0.8
3,628,580	-		OHPLBJKB_03470	0.36	-0.5
3,628,580	-		OHPLBJKB_03470	0.36	-1.0
3,628,607	+		OHPLBJKB_03470	0.40	-0.9
3,628,608	-		OHPLBJKB_03470	0.40	-1.4
3,628,608	-		OHPLBJKB_03470	0.40	+0.3
3,628,612	-		OHPLBJKB_03470	0.40	-0.5
3,628,637	+		OHPLBJKB_03470	0.44	-0.8
3,628,638	-		OHPLBJKB_03470	0.44	-0.1
3,628,640	-		OHPLBJKB_03470	0.44	-0.3
3,628,640	-		OHPLBJKB_03470	0.44	-1.8
3,628,640	-		OHPLBJKB_03470	0.44	-0.2
3,628,711	+		OHPLBJKB_03470	0.54	+2.0
3,628,741	-		OHPLBJKB_03470	0.58	-0.5
3,628,769	+		OHPLBJKB_03470	0.62	+0.7
3,628,769	+		OHPLBJKB_03470	0.62	-0.5
3,628,770	-		OHPLBJKB_03470	0.62	-0.3
3,628,970	+				+0.4
3,628,970	+				-0.9
3,628,973	+				+1.0
3,628,973	+				+0.3
3,628,974	-				-0.4
3,628,974	-				-1.1
3,629,038	+				-0.6
3,629,038	+				-0.4
3,629,038	+				-0.0
3,629,068	+				-1.0
3,629,068	+				-0.7
3,629,069	-				-0.7
3,629,180	-		OHPLBJKB_03471	0.31	-0.1
3,629,180	-		OHPLBJKB_03471	0.31	+0.6
3,629,322	-		OHPLBJKB_03471	0.64	+0.7
3,629,322	-		OHPLBJKB_03471	0.64	-0.3
3,629,379	+		OHPLBJKB_03471	0.78	+0.1
3,629,379	+		OHPLBJKB_03471	0.78	+1.1
3,629,382	+		OHPLBJKB_03471	0.78	-0.2
3,629,383	-		OHPLBJKB_03471	0.79	-0.5
3,629,383	-		OHPLBJKB_03471	0.79	+1.1
3,629,510	+				-0.0
3,629,571	-		OHPLBJKB_03472	0.19	-0.6
3,629,571	-		OHPLBJKB_03472	0.19	-0.3
3,629,589	+		OHPLBJKB_03472	0.22	-0.1
3,629,590	-		OHPLBJKB_03472	0.22	+0.0
3,629,590	-		OHPLBJKB_03472	0.22	-1.4
3,629,690	+		OHPLBJKB_03472	0.40	+1.0
3,629,690	+		OHPLBJKB_03472	0.40	-1.0
3,629,690	+		OHPLBJKB_03472	0.40	-0.3
3,629,693	+		OHPLBJKB_03472	0.41	-0.5
3,629,693	+		OHPLBJKB_03472	0.41	-0.4
3,629,693	+		OHPLBJKB_03472	0.41	+0.7
3,629,693	+		OHPLBJKB_03472	0.41	-0.6
3,629,694	-		OHPLBJKB_03472	0.41	+0.4
3,629,694	-		OHPLBJKB_03472	0.41	-0.5
3,629,694	-		OHPLBJKB_03472	0.41	-0.4
3,629,695	+		OHPLBJKB_03472	0.41	+1.0
3,629,695	+		OHPLBJKB_03472	0.41	+0.5
3,629,695	+		OHPLBJKB_03472	0.41	-0.1
3,629,695	+		OHPLBJKB_03472	0.41	-1.8
3,629,695	+		OHPLBJKB_03472	0.41	-0.4
3,629,696	-		OHPLBJKB_03472	0.42	+0.3
3,629,696	-		OHPLBJKB_03472	0.42	-1.4
3,629,696	-		OHPLBJKB_03472	0.42	-0.8
3,629,867	-		OHPLBJKB_03472	0.73	-0.3
3,629,867	-		OHPLBJKB_03472	0.73	-0.5
3,630,014	+				+0.3
3,630,048	-				+0.8
3,630,055	+				+0.1
3,630,055	+				+0.5
3,630,055	+				+0.9
3,630,055	+				-1.8
3,630,056	-				-0.1
3,630,076	+				-0.1
3,630,096	+				-1.2
3,630,096	+				-0.3
3,630,097	-				-0.0
3,630,097	-				+0.5
3,630,097	-				+0.2
3,630,098	+				-0.2
3,630,098	+				+0.4
3,630,099	-				-0.6
3,630,130	-				-1.6
3,630,135	+				+1.4
3,630,135	+				-2.4
3,630,135	+				-0.8
3,630,136	-				-0.1
3,630,154	-				-0.8
3,630,189	+				-0.2
3,630,199	+				-0.5
3,630,199	+				+0.5
3,630,203	-		OHPLBJKB_03473	0.11	-0.9
3,630,238	+		OHPLBJKB_03473	0.29	-0.2
3,630,243	+		OHPLBJKB_03473	0.31	-0.6
3,630,336	+		OHPLBJKB_03473	0.78	-1.0
3,630,336	+		OHPLBJKB_03473	0.78	+0.2
3,630,336	+		OHPLBJKB_03473	0.78	-0.1
3,630,337	-		OHPLBJKB_03473	0.78	-1.5
3,630,352	+		OHPLBJKB_03473	0.86	+0.1
3,630,353	-		OHPLBJKB_03473	0.86	-1.3
3,630,366	+				-0.1
3,630,382	-				+1.5
3,630,385	+				-0.3
3,630,385	+				-0.5
3,630,385	+				-0.5
3,630,385	+				-0.2
3,630,385	+				+0.8
3,630,386	-				-1.3
3,630,386	-				-0.3
3,630,386	-				+0.4
3,630,386	-				+0.3
3,630,410	-		OHPLBJKB_03474	0.16	-0.0
3,630,410	-		OHPLBJKB_03474	0.16	+0.5
3,630,443	+		OHPLBJKB_03474	0.29	-0.8
3,630,444	-		OHPLBJKB_03474	0.30	-0.8
3,630,444	-		OHPLBJKB_03474	0.30	+0.9
3,630,560	+		OHPLBJKB_03474	0.74	+0.1
3,630,560	+		OHPLBJKB_03474	0.74	-0.0
3,630,576	+		OHPLBJKB_03474	0.80	-1.5
3,630,585	+		OHPLBJKB_03474	0.84	-0.9
3,630,677	+				-1.5
3,630,682	-				-0.7