Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_03042 and OHPLBJKB_03043 are separated by 380 nucleotides OHPLBJKB_03043 and OHPLBJKB_03044 are separated by 8 nucleotides OHPLBJKB_03044 and OHPLBJKB_03045 are separated by 23 nucleotides OHPLBJKB_03045 and OHPLBJKB_03046 are separated by 34 nucleotides OHPLBJKB_03046 and OHPLBJKB_03047 are separated by 15 nucleotides OHPLBJKB_03047 and OHPLBJKB_03048 are separated by 47 nucleotides OHPLBJKB_03048 and OHPLBJKB_03049 are separated by 37 nucleotides OHPLBJKB_03049 and OHPLBJKB_03050 are separated by 153 nucleotides
OHPLBJKB_03042: OHPLBJKB_03042 - Asparagine synthetase B [glutamine-hydrolyzing], at 3,174,451 to 3,176,115
_03042
OHPLBJKB_03043: OHPLBJKB_03043 - tRNA-Met, at 3,176,496 to 3,176,572
_03043
OHPLBJKB_03044: OHPLBJKB_03044 - tRNA-Leu, at 3,176,581 to 3,176,665
_03044
OHPLBJKB_03045: OHPLBJKB_03045 - tRNA-Gln, at 3,176,689 to 3,176,763
_03045
OHPLBJKB_03046: OHPLBJKB_03046 - tRNA-Gln, at 3,176,798 to 3,176,872
_03046
OHPLBJKB_03047: OHPLBJKB_03047 - tRNA-Met, at 3,176,888 to 3,176,964
_03047
OHPLBJKB_03048: OHPLBJKB_03048 - tRNA-Gln, at 3,177,012 to 3,177,086
_03048
OHPLBJKB_03049: OHPLBJKB_03049 - tRNA-Gln, at 3,177,124 to 3,177,198
_03049
OHPLBJKB_03050: OHPLBJKB_03050 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase, at 3,177,352 to 3,178,527
_03050
Position (kb)
3176
3177 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3175.596 kb on + strand, within OHPLBJKB_03042 at 3175.596 kb on + strand, within OHPLBJKB_03042 at 3175.596 kb on + strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.597 kb on - strand, within OHPLBJKB_03042 at 3175.600 kb on + strand, within OHPLBJKB_03042 at 3175.600 kb on + strand, within OHPLBJKB_03042 at 3175.600 kb on + strand, within OHPLBJKB_03042 at 3175.600 kb on + strand, within OHPLBJKB_03042 at 3175.600 kb on + strand, within OHPLBJKB_03042 at 3175.600 kb on + strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.601 kb on - strand, within OHPLBJKB_03042 at 3175.768 kb on + strand, within OHPLBJKB_03042 at 3175.769 kb on - strand, within OHPLBJKB_03042 at 3175.769 kb on - strand, within OHPLBJKB_03042 at 3175.769 kb on - strand, within OHPLBJKB_03042 at 3175.769 kb on - strand, within OHPLBJKB_03042 at 3175.825 kb on + strand, within OHPLBJKB_03042 at 3175.910 kb on - strand, within OHPLBJKB_03042 at 3175.936 kb on + strand, within OHPLBJKB_03042 at 3175.937 kb on - strand, within OHPLBJKB_03042 at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.107 kb on + strand at 3176.108 kb on - strand at 3176.108 kb on - strand at 3176.108 kb on - strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.109 kb on + strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.110 kb on - strand at 3176.114 kb on - strand at 3176.159 kb on - strand at 3176.239 kb on + strand at 3176.239 kb on + strand at 3176.239 kb on + strand at 3176.240 kb on - strand at 3176.248 kb on - strand at 3176.255 kb on - strand at 3176.255 kb on - strand at 3176.260 kb on - strand at 3176.274 kb on - strand at 3176.274 kb on - strand at 3176.319 kb on + strand at 3176.319 kb on + strand at 3176.319 kb on + strand at 3176.320 kb on - strand at 3176.343 kb on - strand at 3176.343 kb on - strand at 3176.363 kb on - strand at 3176.363 kb on - strand at 3177.110 kb on + strand at 3177.110 kb on + strand at 3177.110 kb on + strand at 3177.110 kb on + strand at 3177.110 kb on + strand at 3177.110 kb on + strand at 3177.203 kb on - strand at 3177.319 kb on + strand at 3177.347 kb on + strand at 3177.347 kb on + strand at 3177.347 kb on + strand at 3177.347 kb on + strand at 3177.347 kb on + strand at 3177.348 kb on - strand at 3177.348 kb on - strand at 3177.348 kb on - strand at 3177.354 kb on - strand at 3177.368 kb on + strand at 3177.369 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 3,175,596 + OHPLBJKB_03042 0.69 +1.3 3,175,596 + OHPLBJKB_03042 0.69 +0.5 3,175,596 + OHPLBJKB_03042 0.69 +0.5 3,175,597 - OHPLBJKB_03042 0.69 +1.2 3,175,597 - OHPLBJKB_03042 0.69 -0.4 3,175,597 - OHPLBJKB_03042 0.69 -0.4 3,175,597 - OHPLBJKB_03042 0.69 -2.3 3,175,597 - OHPLBJKB_03042 0.69 +0.5 3,175,597 - OHPLBJKB_03042 0.69 -0.3 3,175,597 - OHPLBJKB_03042 0.69 +0.9 3,175,597 - OHPLBJKB_03042 0.69 -0.4 3,175,597 - OHPLBJKB_03042 0.69 -0.1 3,175,600 + OHPLBJKB_03042 0.69 +0.2 3,175,600 + OHPLBJKB_03042 0.69 +0.6 3,175,600 + OHPLBJKB_03042 0.69 +0.2 3,175,600 + OHPLBJKB_03042 0.69 -0.3 3,175,600 + OHPLBJKB_03042 0.69 -0.8 3,175,600 + OHPLBJKB_03042 0.69 +0.3 3,175,601 - OHPLBJKB_03042 0.69 -0.2 3,175,601 - OHPLBJKB_03042 0.69 -0.7 3,175,601 - OHPLBJKB_03042 0.69 +0.9 3,175,601 - OHPLBJKB_03042 0.69 -1.9 3,175,601 - OHPLBJKB_03042 0.69 +1.0 3,175,601 - OHPLBJKB_03042 0.69 +0.3 3,175,601 - OHPLBJKB_03042 0.69 +0.1 3,175,601 - OHPLBJKB_03042 0.69 -0.4 3,175,601 - OHPLBJKB_03042 0.69 +0.2 3,175,768 + OHPLBJKB_03042 0.79 -0.0 3,175,769 - OHPLBJKB_03042 0.79 -0.5 3,175,769 - OHPLBJKB_03042 0.79 -0.3 3,175,769 - OHPLBJKB_03042 0.79 -1.1 3,175,769 - OHPLBJKB_03042 0.79 -0.1 3,175,825 + OHPLBJKB_03042 0.83 +0.1 3,175,910 - OHPLBJKB_03042 0.88 -0.2 3,175,936 + OHPLBJKB_03042 0.89 +0.4 3,175,937 - OHPLBJKB_03042 0.89 -0.6 3,176,107 + -0.2 3,176,107 + -0.5 3,176,107 + -0.3 3,176,107 + +0.6 3,176,107 + +1.7 3,176,107 + +0.9 3,176,107 + -0.6 3,176,107 + +0.0 3,176,107 + -1.4 3,176,108 - +0.2 3,176,108 - -1.3 3,176,108 - +0.7 3,176,109 + -0.3 3,176,109 + -0.2 3,176,109 + +0.5 3,176,109 + -0.1 3,176,109 + +0.3 3,176,109 + +0.5 3,176,109 + -1.0 3,176,109 + +1.2 3,176,109 + -0.7 3,176,110 - -0.2 3,176,110 - +0.1 3,176,110 - -0.3 3,176,110 - -0.3 3,176,110 - +0.6 3,176,110 - +1.0 3,176,110 - +0.7 3,176,110 - +1.2 3,176,110 - +1.1 3,176,110 - -0.8 3,176,114 - +1.0 3,176,159 - -0.0 3,176,239 + -1.6 3,176,239 + +1.1 3,176,239 + +1.0 3,176,240 - -0.0 3,176,248 - -0.6 3,176,255 - -0.6 3,176,255 - +0.1 3,176,260 - -0.4 3,176,274 - +0.5 3,176,274 - +0.2 3,176,319 + -0.3 3,176,319 + +0.3 3,176,319 + +0.7 3,176,320 - -0.0 3,176,343 - -0.4 3,176,343 - +0.3 3,176,363 - -0.8 3,176,363 - +0.3 3,177,110 + -0.5 3,177,110 + +0.5 3,177,110 + -0.2 3,177,110 + -0.1 3,177,110 + +0.1 3,177,110 + -0.7 3,177,203 - +0.1 3,177,319 + +0.7 3,177,347 + -0.4 3,177,347 + -1.6 3,177,347 + -0.5 3,177,347 + -0.3 3,177,347 + -0.4 3,177,348 - +0.4 3,177,348 - -0.0 3,177,348 - +0.9 3,177,354 - +0.6 3,177,368 + -2.9 3,177,369 - -0.9
Or see this region's nucleotide sequence