Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_01816 and OHPLBJKB_01817 are separated by 56 nucleotides OHPLBJKB_01817 and OHPLBJKB_01818 are separated by 151 nucleotides OHPLBJKB_01818 and OHPLBJKB_01819 are separated by 54 nucleotides OHPLBJKB_01819 and OHPLBJKB_01820 are separated by 12 nucleotides OHPLBJKB_01820 and OHPLBJKB_01821 are separated by 195 nucleotides
OHPLBJKB_01816: OHPLBJKB_01816 - UvrABC system protein C, at 1,896,293 to 1,898,125
_01816
OHPLBJKB_01817: OHPLBJKB_01817 - CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, at 1,898,182 to 1,898,730
_01817
OHPLBJKB_01818: OHPLBJKB_01818 - tRNA-Gly, at 1,898,882 to 1,898,957
_01818
OHPLBJKB_01819: OHPLBJKB_01819 - tRNA-Cys, at 1,899,012 to 1,899,085
_01819
OHPLBJKB_01820: OHPLBJKB_01820 - tRNA-Leu, at 1,899,098 to 1,899,184
_01820
OHPLBJKB_01821: OHPLBJKB_01821 - hypothetical protein, at 1,899,380 to 1,900,045
_01821
Position (kb)
1898
1899 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1897.202 kb on + strand, within OHPLBJKB_01816 at 1897.206 kb on + strand, within OHPLBJKB_01816 at 1897.206 kb on + strand, within OHPLBJKB_01816 at 1897.206 kb on + strand, within OHPLBJKB_01816 at 1897.207 kb on - strand, within OHPLBJKB_01816 at 1897.231 kb on - strand, within OHPLBJKB_01816 at 1897.267 kb on + strand, within OHPLBJKB_01816 at 1897.316 kb on - strand, within OHPLBJKB_01816 at 1897.353 kb on - strand, within OHPLBJKB_01816 at 1897.415 kb on - strand, within OHPLBJKB_01816 at 1897.433 kb on - strand, within OHPLBJKB_01816 at 1897.433 kb on - strand, within OHPLBJKB_01816 at 1897.498 kb on + strand, within OHPLBJKB_01816 at 1897.544 kb on - strand, within OHPLBJKB_01816 at 1897.575 kb on - strand, within OHPLBJKB_01816 at 1897.575 kb on - strand, within OHPLBJKB_01816 at 1897.576 kb on + strand, within OHPLBJKB_01816 at 1897.663 kb on + strand, within OHPLBJKB_01816 at 1897.663 kb on + strand, within OHPLBJKB_01816 at 1897.664 kb on - strand, within OHPLBJKB_01816 at 1897.680 kb on + strand, within OHPLBJKB_01816 at 1897.680 kb on + strand, within OHPLBJKB_01816 at 1897.681 kb on - strand, within OHPLBJKB_01816 at 1897.685 kb on - strand, within OHPLBJKB_01816 at 1897.753 kb on + strand, within OHPLBJKB_01816 at 1897.770 kb on + strand, within OHPLBJKB_01816 at 1897.798 kb on + strand, within OHPLBJKB_01816 at 1898.015 kb on + strand at 1898.016 kb on - strand at 1898.016 kb on - strand at 1898.016 kb on - strand at 1898.016 kb on - strand at 1898.017 kb on + strand at 1898.037 kb on + strand at 1898.037 kb on + strand at 1898.148 kb on + strand at 1899.194 kb on + strand at 1899.315 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.338 kb on + strand at 1899.339 kb on - strand at 1899.339 kb on - strand at 1899.339 kb on - strand at 1899.339 kb on - strand at 1899.339 kb on - strand at 1899.339 kb on - strand at 1899.344 kb on - strand at 1899.344 kb on - strand at 1899.440 kb on + strand at 1899.563 kb on + strand, within OHPLBJKB_01821 at 1899.564 kb on - strand, within OHPLBJKB_01821 at 1899.564 kb on - strand, within OHPLBJKB_01821 at 1899.564 kb on - strand, within OHPLBJKB_01821 at 1899.604 kb on + strand, within OHPLBJKB_01821 at 1899.625 kb on + strand, within OHPLBJKB_01821 at 1899.626 kb on - strand, within OHPLBJKB_01821
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 1,897,202 + OHPLBJKB_01816 0.50 -1.5 1,897,206 + OHPLBJKB_01816 0.50 +1.8 1,897,206 + OHPLBJKB_01816 0.50 +0.4 1,897,206 + OHPLBJKB_01816 0.50 -0.1 1,897,207 - OHPLBJKB_01816 0.50 -0.5 1,897,231 - OHPLBJKB_01816 0.51 +0.7 1,897,267 + OHPLBJKB_01816 0.53 -0.7 1,897,316 - OHPLBJKB_01816 0.56 +1.2 1,897,353 - OHPLBJKB_01816 0.58 -0.7 1,897,415 - OHPLBJKB_01816 0.61 -0.1 1,897,433 - OHPLBJKB_01816 0.62 +0.6 1,897,433 - OHPLBJKB_01816 0.62 -0.5 1,897,498 + OHPLBJKB_01816 0.66 -1.5 1,897,544 - OHPLBJKB_01816 0.68 +0.5 1,897,575 - OHPLBJKB_01816 0.70 -0.6 1,897,575 - OHPLBJKB_01816 0.70 -0.5 1,897,576 + OHPLBJKB_01816 0.70 -0.2 1,897,663 + OHPLBJKB_01816 0.75 +0.9 1,897,663 + OHPLBJKB_01816 0.75 +1.5 1,897,664 - OHPLBJKB_01816 0.75 -0.9 1,897,680 + OHPLBJKB_01816 0.76 -0.3 1,897,680 + OHPLBJKB_01816 0.76 -0.3 1,897,681 - OHPLBJKB_01816 0.76 +0.5 1,897,685 - OHPLBJKB_01816 0.76 -0.7 1,897,753 + OHPLBJKB_01816 0.80 +0.2 1,897,770 + OHPLBJKB_01816 0.81 +0.2 1,897,798 + OHPLBJKB_01816 0.82 -0.9 1,898,015 + +0.7 1,898,016 - -0.4 1,898,016 - +0.9 1,898,016 - +0.1 1,898,016 - -1.7 1,898,017 + -0.5 1,898,037 + -0.7 1,898,037 + +0.2 1,898,148 + +0.9 1,899,194 + +0.6 1,899,315 + -0.3 1,899,338 + +0.3 1,899,338 + -0.3 1,899,338 + +0.8 1,899,338 + -1.3 1,899,338 + +0.6 1,899,338 + -0.2 1,899,338 + +0.5 1,899,338 + +2.5 1,899,338 + +0.7 1,899,338 + -0.2 1,899,338 + -0.5 1,899,339 - -0.6 1,899,339 - +0.1 1,899,339 - -0.2 1,899,339 - +1.1 1,899,339 - +0.1 1,899,339 - +1.5 1,899,344 - -0.6 1,899,344 - -0.3 1,899,440 + -2.1 1,899,563 + OHPLBJKB_01821 0.27 +0.7 1,899,564 - OHPLBJKB_01821 0.28 -0.9 1,899,564 - OHPLBJKB_01821 0.28 +1.0 1,899,564 - OHPLBJKB_01821 0.28 +0.2 1,899,604 + OHPLBJKB_01821 0.34 -0.5 1,899,625 + OHPLBJKB_01821 0.37 -0.8 1,899,626 - OHPLBJKB_01821 0.37 +0.6
Or see this region's nucleotide sequence