Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00983 and OHPLBJKB_00984 are separated by 49 nucleotides OHPLBJKB_00984 and OHPLBJKB_00985 are separated by 193 nucleotides OHPLBJKB_00985 and OHPLBJKB_00986 are separated by 18 nucleotides OHPLBJKB_00986 and OHPLBJKB_00987 overlap by 1 nucleotides OHPLBJKB_00987 and OHPLBJKB_00988 overlap by 4 nucleotides
OHPLBJKB_00983: OHPLBJKB_00983 - Adenylyl-sulfate kinase, at 1,019,490 to 1,020,095
_00983
OHPLBJKB_00984: OHPLBJKB_00984 - Inner membrane protein YgbE, at 1,020,145 to 1,020,468
_00984
OHPLBJKB_00985: OHPLBJKB_00985 - Cell division protein FtsB, at 1,020,662 to 1,020,973
_00985
OHPLBJKB_00986: OHPLBJKB_00986 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 1,020,992 to 1,021,702
_00986
OHPLBJKB_00987: OHPLBJKB_00987 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, at 1,021,702 to 1,022,181
_00987
OHPLBJKB_00988: OHPLBJKB_00988 - tRNA pseudouridine synthase D, at 1,022,178 to 1,023,227
_00988
Position (kb)
1020
1021
1022 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1020.031 kb on + strand, within OHPLBJKB_00983 at 1020.032 kb on - strand, within OHPLBJKB_00983 at 1020.032 kb on - strand, within OHPLBJKB_00983 at 1020.056 kb on - strand at 1020.056 kb on - strand at 1020.058 kb on + strand at 1020.059 kb on - strand at 1020.081 kb on - strand at 1020.081 kb on - strand at 1020.084 kb on - strand at 1020.084 kb on - strand at 1020.132 kb on - strand at 1020.145 kb on - strand at 1020.145 kb on - strand at 1020.151 kb on - strand at 1020.153 kb on + strand at 1020.165 kb on + strand at 1020.166 kb on - strand at 1020.166 kb on - strand at 1020.166 kb on - strand at 1020.189 kb on + strand, within OHPLBJKB_00984 at 1020.240 kb on + strand, within OHPLBJKB_00984 at 1020.251 kb on + strand, within OHPLBJKB_00984 at 1020.281 kb on - strand, within OHPLBJKB_00984 at 1020.289 kb on - strand, within OHPLBJKB_00984 at 1020.289 kb on - strand, within OHPLBJKB_00984 at 1020.306 kb on + strand, within OHPLBJKB_00984 at 1020.307 kb on - strand, within OHPLBJKB_00984 at 1020.310 kb on + strand, within OHPLBJKB_00984 at 1020.310 kb on + strand, within OHPLBJKB_00984 at 1020.310 kb on + strand, within OHPLBJKB_00984 at 1020.310 kb on + strand, within OHPLBJKB_00984 at 1020.311 kb on - strand, within OHPLBJKB_00984 at 1020.311 kb on - strand, within OHPLBJKB_00984 at 1020.311 kb on - strand, within OHPLBJKB_00984 at 1020.311 kb on - strand, within OHPLBJKB_00984 at 1020.392 kb on + strand, within OHPLBJKB_00984 at 1020.393 kb on - strand, within OHPLBJKB_00984 at 1020.402 kb on + strand, within OHPLBJKB_00984 at 1020.402 kb on + strand, within OHPLBJKB_00984 at 1020.403 kb on - strand, within OHPLBJKB_00984 at 1020.403 kb on - strand, within OHPLBJKB_00984 at 1020.425 kb on + strand, within OHPLBJKB_00984 at 1020.426 kb on - strand, within OHPLBJKB_00984 at 1020.432 kb on + strand, within OHPLBJKB_00984 at 1020.433 kb on - strand, within OHPLBJKB_00984 at 1020.433 kb on - strand, within OHPLBJKB_00984 at 1020.433 kb on - strand, within OHPLBJKB_00984 at 1020.433 kb on - strand, within OHPLBJKB_00984 at 1020.433 kb on - strand, within OHPLBJKB_00984 at 1020.433 kb on - strand, within OHPLBJKB_00984 at 1020.433 kb on - strand, within OHPLBJKB_00984 at 1020.450 kb on + strand at 1020.450 kb on + strand at 1020.451 kb on - strand at 1020.458 kb on + strand at 1020.466 kb on + strand at 1020.473 kb on + strand at 1020.497 kb on - strand at 1020.497 kb on - strand at 1020.512 kb on + strand at 1020.512 kb on + strand at 1020.512 kb on + strand at 1020.512 kb on + strand at 1020.512 kb on + strand at 1020.512 kb on + strand at 1020.513 kb on - strand at 1020.513 kb on - strand at 1020.513 kb on - strand at 1020.513 kb on - strand at 1020.513 kb on - strand at 1020.513 kb on - strand at 1020.516 kb on - strand at 1020.524 kb on + strand at 1020.524 kb on + strand at 1020.524 kb on + strand at 1020.524 kb on + strand at 1020.524 kb on + strand at 1020.525 kb on - strand at 1020.525 kb on - strand at 1020.525 kb on - strand at 1020.525 kb on - strand at 1020.525 kb on - strand at 1020.525 kb on - strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.546 kb on + strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.547 kb on - strand at 1020.550 kb on + strand at 1020.550 kb on + strand at 1020.551 kb on - strand at 1020.551 kb on - strand at 1020.551 kb on - strand at 1020.551 kb on - strand at 1020.551 kb on - strand at 1020.551 kb on - strand at 1020.551 kb on - strand at 1020.569 kb on + strand at 1020.569 kb on + strand at 1020.610 kb on + strand at 1020.610 kb on + strand at 1020.610 kb on + strand at 1020.610 kb on + strand at 1020.610 kb on + strand at 1020.610 kb on + strand at 1021.696 kb on + strand at 1021.696 kb on + strand at 1021.696 kb on + strand at 1021.696 kb on + strand at 1021.696 kb on + strand at 1021.696 kb on + strand at 1021.696 kb on + strand at 1021.696 kb on + strand at 1022.203 kb on - strand at 1022.203 kb on - strand at 1022.306 kb on + strand, within OHPLBJKB_00988 at 1022.306 kb on + strand, within OHPLBJKB_00988 at 1022.306 kb on + strand, within OHPLBJKB_00988 at 1022.307 kb on - strand, within OHPLBJKB_00988 at 1022.307 kb on - strand, within OHPLBJKB_00988 at 1022.316 kb on - strand, within OHPLBJKB_00988 at 1022.444 kb on - strand, within OHPLBJKB_00988 at 1022.517 kb on + strand, within OHPLBJKB_00988 at 1022.517 kb on + strand, within OHPLBJKB_00988 at 1022.518 kb on - strand, within OHPLBJKB_00988 at 1022.518 kb on - strand, within OHPLBJKB_00988 at 1022.562 kb on - strand, within OHPLBJKB_00988 at 1022.627 kb on + strand, within OHPLBJKB_00988 at 1022.627 kb on + strand, within OHPLBJKB_00988 at 1022.635 kb on + strand, within OHPLBJKB_00988 at 1022.644 kb on + strand, within OHPLBJKB_00988
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 1,020,031 + OHPLBJKB_00983 0.89 -0.6 1,020,032 - OHPLBJKB_00983 0.89 +0.7 1,020,032 - OHPLBJKB_00983 0.89 +0.1 1,020,056 - -0.6 1,020,056 - -0.1 1,020,058 + +0.6 1,020,059 - +0.4 1,020,081 - -0.2 1,020,081 - -0.3 1,020,084 - +0.4 1,020,084 - +0.3 1,020,132 - +2.3 1,020,145 - -0.6 1,020,145 - -0.5 1,020,151 - -0.1 1,020,153 + -1.0 1,020,165 + +1.1 1,020,166 - +0.9 1,020,166 - -0.9 1,020,166 - +0.4 1,020,189 + OHPLBJKB_00984 0.14 +0.4 1,020,240 + OHPLBJKB_00984 0.29 -0.2 1,020,251 + OHPLBJKB_00984 0.33 +0.3 1,020,281 - OHPLBJKB_00984 0.42 -1.4 1,020,289 - OHPLBJKB_00984 0.44 -1.6 1,020,289 - OHPLBJKB_00984 0.44 -1.1 1,020,306 + OHPLBJKB_00984 0.50 -0.2 1,020,307 - OHPLBJKB_00984 0.50 -0.5 1,020,310 + OHPLBJKB_00984 0.51 -0.3 1,020,310 + OHPLBJKB_00984 0.51 +0.0 1,020,310 + OHPLBJKB_00984 0.51 +0.1 1,020,310 + OHPLBJKB_00984 0.51 -1.3 1,020,311 - OHPLBJKB_00984 0.51 -0.1 1,020,311 - OHPLBJKB_00984 0.51 +0.2 1,020,311 - OHPLBJKB_00984 0.51 -0.5 1,020,311 - OHPLBJKB_00984 0.51 -0.8 1,020,392 + OHPLBJKB_00984 0.76 -0.2 1,020,393 - OHPLBJKB_00984 0.77 -1.8 1,020,402 + OHPLBJKB_00984 0.79 +0.3 1,020,402 + OHPLBJKB_00984 0.79 -0.3 1,020,403 - OHPLBJKB_00984 0.80 +0.3 1,020,403 - OHPLBJKB_00984 0.80 -0.5 1,020,425 + OHPLBJKB_00984 0.86 +0.5 1,020,426 - OHPLBJKB_00984 0.87 +0.4 1,020,432 + OHPLBJKB_00984 0.89 +1.5 1,020,433 - OHPLBJKB_00984 0.89 -1.8 1,020,433 - OHPLBJKB_00984 0.89 +0.4 1,020,433 - OHPLBJKB_00984 0.89 +0.1 1,020,433 - OHPLBJKB_00984 0.89 -0.1 1,020,433 - OHPLBJKB_00984 0.89 -0.5 1,020,433 - OHPLBJKB_00984 0.89 +0.1 1,020,433 - OHPLBJKB_00984 0.89 -0.3 1,020,450 + +0.5 1,020,450 + -0.6 1,020,451 - +0.5 1,020,458 + +0.5 1,020,466 + -1.3 1,020,473 + -1.0 1,020,497 - +0.3 1,020,497 - -1.0 1,020,512 + -0.3 1,020,512 + +0.0 1,020,512 + -0.7 1,020,512 + -0.5 1,020,512 + -2.1 1,020,512 + -0.2 1,020,513 - -0.5 1,020,513 - -0.1 1,020,513 - +0.1 1,020,513 - -0.3 1,020,513 - -1.1 1,020,513 - -1.4 1,020,516 - -0.4 1,020,524 + -0.4 1,020,524 + +0.9 1,020,524 + +0.5 1,020,524 + -0.2 1,020,524 + -1.1 1,020,525 - -1.0 1,020,525 - +0.4 1,020,525 - -0.1 1,020,525 - +0.3 1,020,525 - -0.5 1,020,525 - -0.6 1,020,546 + +1.1 1,020,546 + -0.6 1,020,546 + -0.6 1,020,546 + -1.7 1,020,546 + +0.4 1,020,546 + -1.1 1,020,546 + -0.8 1,020,546 + +0.3 1,020,546 + -1.2 1,020,546 + +0.9 1,020,546 + +0.3 1,020,547 - -0.8 1,020,547 - -0.1 1,020,547 - +0.1 1,020,547 - -0.1 1,020,547 - -0.2 1,020,547 - -0.1 1,020,547 - +0.5 1,020,547 - +0.7 1,020,547 - -0.5 1,020,547 - +1.2 1,020,547 - +1.1 1,020,547 - +0.2 1,020,547 - +0.2 1,020,547 - -0.1 1,020,547 - -0.3 1,020,550 + -0.8 1,020,550 + -0.2 1,020,551 - -2.3 1,020,551 - -0.6 1,020,551 - +0.5 1,020,551 - -0.3 1,020,551 - -1.3 1,020,551 - +0.7 1,020,551 - -0.5 1,020,569 + +0.8 1,020,569 + +0.4 1,020,610 + -0.5 1,020,610 + +0.9 1,020,610 + -2.7 1,020,610 + +0.3 1,020,610 + -0.3 1,020,610 + -0.3 1,021,696 + -1.3 1,021,696 + -0.8 1,021,696 + +0.5 1,021,696 + -1.1 1,021,696 + -0.6 1,021,696 + -1.9 1,021,696 + +0.5 1,021,696 + +0.9 1,022,203 - -0.3 1,022,203 - +0.5 1,022,306 + OHPLBJKB_00988 0.12 +1.1 1,022,306 + OHPLBJKB_00988 0.12 +0.5 1,022,306 + OHPLBJKB_00988 0.12 -1.3 1,022,307 - OHPLBJKB_00988 0.12 -0.1 1,022,307 - OHPLBJKB_00988 0.12 -1.5 1,022,316 - OHPLBJKB_00988 0.13 +1.5 1,022,444 - OHPLBJKB_00988 0.25 +0.4 1,022,517 + OHPLBJKB_00988 0.32 -0.8 1,022,517 + OHPLBJKB_00988 0.32 +0.1 1,022,518 - OHPLBJKB_00988 0.32 +0.1 1,022,518 - OHPLBJKB_00988 0.32 -0.7 1,022,562 - OHPLBJKB_00988 0.37 -0.1 1,022,627 + OHPLBJKB_00988 0.43 -0.4 1,022,627 + OHPLBJKB_00988 0.43 -0.6 1,022,635 + OHPLBJKB_00988 0.44 +0.4 1,022,644 + OHPLBJKB_00988 0.44 +0.1
Or see this region's nucleotide sequence