Experiment: K5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OHPLBJKB_00696 and OHPLBJKB_00697 are separated by 190 nucleotides OHPLBJKB_00697 and OHPLBJKB_00698 are separated by 39 nucleotides
OHPLBJKB_00696: OHPLBJKB_00696 - putative oxidoreductase YghA, at 715,524 to 716,408
_00696
OHPLBJKB_00697: OHPLBJKB_00697 - hypothetical protein, at 716,599 to 717,093
_00697
OHPLBJKB_00698: OHPLBJKB_00698 - L-glyceraldehyde 3-phosphate reductase, at 717,133 to 718,173
_00698
Position (kb) 716
717
718 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.603 kb on + strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.604 kb on - strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.605 kb on + strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.606 kb on - strand at 715.674 kb on - strand, within OHPLBJKB_00696 at 715.674 kb on - strand, within OHPLBJKB_00696 at 715.733 kb on + strand, within OHPLBJKB_00696 at 715.733 kb on + strand, within OHPLBJKB_00696 at 715.734 kb on - strand, within OHPLBJKB_00696 at 715.783 kb on + strand, within OHPLBJKB_00696 at 715.783 kb on + strand, within OHPLBJKB_00696 at 715.814 kb on - strand, within OHPLBJKB_00696 at 715.821 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.868 kb on + strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 715.869 kb on - strand, within OHPLBJKB_00696 at 716.015 kb on + strand, within OHPLBJKB_00696 at 716.016 kb on - strand, within OHPLBJKB_00696 at 716.170 kb on + strand, within OHPLBJKB_00696 at 716.170 kb on + strand, within OHPLBJKB_00696 at 716.226 kb on + strand, within OHPLBJKB_00696 at 716.227 kb on - strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.287 kb on + strand, within OHPLBJKB_00696 at 716.288 kb on - strand, within OHPLBJKB_00696 at 716.288 kb on - strand, within OHPLBJKB_00696 at 716.288 kb on - strand, within OHPLBJKB_00696 at 716.374 kb on + strand at 716.374 kb on + strand at 716.375 kb on - strand at 716.375 kb on - strand at 716.375 kb on - strand at 716.375 kb on - strand at 716.378 kb on - strand at 716.378 kb on - strand at 716.397 kb on + strand at 716.398 kb on - strand at 716.500 kb on + strand at 716.520 kb on + strand at 716.520 kb on + strand at 716.520 kb on + strand at 716.520 kb on + strand at 716.521 kb on - strand at 716.521 kb on - strand at 716.521 kb on - strand at 716.521 kb on - strand at 716.522 kb on + strand at 716.523 kb on - strand at 716.565 kb on - strand at 716.565 kb on - strand at 716.565 kb on - strand at 716.565 kb on - strand at 716.579 kb on + strand at 716.580 kb on - strand at 716.583 kb on + strand at 716.584 kb on - strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.598 kb on + strand at 716.599 kb on - strand at 716.599 kb on - strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.626 kb on + strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.627 kb on - strand at 716.657 kb on - strand, within OHPLBJKB_00697 at 716.731 kb on - strand, within OHPLBJKB_00697 at 716.731 kb on - strand, within OHPLBJKB_00697 at 716.924 kb on + strand, within OHPLBJKB_00697 at 716.924 kb on + strand, within OHPLBJKB_00697 at 716.925 kb on - strand, within OHPLBJKB_00697 at 716.925 kb on - strand, within OHPLBJKB_00697 at 716.925 kb on - strand, within OHPLBJKB_00697 at 717.013 kb on + strand, within OHPLBJKB_00697 at 717.013 kb on + strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.014 kb on - strand, within OHPLBJKB_00697 at 717.062 kb on - strand at 717.085 kb on - strand at 717.085 kb on - strand at 717.127 kb on - strand at 717.127 kb on - strand at 717.139 kb on - strand at 717.139 kb on - strand at 717.213 kb on + strand at 717.213 kb on + strand at 717.251 kb on - strand, within OHPLBJKB_00698 at 717.426 kb on + strand, within OHPLBJKB_00698 at 717.426 kb on + strand, within OHPLBJKB_00698 at 717.427 kb on - strand, within OHPLBJKB_00698 at 717.508 kb on - strand, within OHPLBJKB_00698 at 717.508 kb on - strand, within OHPLBJKB_00698 at 717.517 kb on - strand, within OHPLBJKB_00698 at 717.517 kb on - strand, within OHPLBJKB_00698 at 717.562 kb on - strand, within OHPLBJKB_00698 at 717.581 kb on - strand, within OHPLBJKB_00698 at 717.604 kb on + strand, within OHPLBJKB_00698 at 717.605 kb on - strand, within OHPLBJKB_00698 at 717.683 kb on + strand, within OHPLBJKB_00698 at 717.683 kb on + strand, within OHPLBJKB_00698 at 717.684 kb on - strand, within OHPLBJKB_00698 at 717.684 kb on - strand, within OHPLBJKB_00698 at 717.684 kb on - strand, within OHPLBJKB_00698 at 717.782 kb on + strand, within OHPLBJKB_00698 at 717.782 kb on + strand, within OHPLBJKB_00698 at 717.783 kb on - strand, within OHPLBJKB_00698 at 717.783 kb on - strand, within OHPLBJKB_00698 at 717.783 kb on - strand, within OHPLBJKB_00698 at 717.830 kb on + strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.831 kb on - strand, within OHPLBJKB_00698 at 717.834 kb on + strand, within OHPLBJKB_00698 at 717.834 kb on + strand, within OHPLBJKB_00698 at 717.835 kb on - strand, within OHPLBJKB_00698 at 717.835 kb on - strand, within OHPLBJKB_00698 at 717.870 kb on + strand, within OHPLBJKB_00698 at 717.871 kb on - strand, within OHPLBJKB_00698 at 717.889 kb on - strand, within OHPLBJKB_00698 at 717.894 kb on + strand, within OHPLBJKB_00698 at 717.895 kb on - strand, within OHPLBJKB_00698 at 717.895 kb on - strand, within OHPLBJKB_00698 at 717.988 kb on + strand, within OHPLBJKB_00698 at 718.023 kb on + strand, within OHPLBJKB_00698 at 718.078 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction K5 remove 715,603 + +0.2 715,603 + +0.3 715,603 + +0.1 715,603 + -1.2 715,603 + +1.2 715,603 + +0.0 715,603 + +0.0 715,604 - -0.2 715,604 - -1.4 715,604 - -0.1 715,604 - -0.9 715,604 - +0.3 715,604 - +0.6 715,604 - +0.0 715,604 - -0.5 715,605 + +0.2 715,605 + -0.4 715,605 + -0.1 715,605 + +1.0 715,605 + +0.9 715,605 + -0.3 715,605 + -1.6 715,605 + +3.2 715,605 + -0.8 715,605 + +0.0 715,605 + -1.1 715,605 + -0.0 715,606 - +0.0 715,606 - +0.0 715,606 - -0.5 715,606 - -0.5 715,606 - +0.3 715,606 - +0.0 715,606 - -0.2 715,606 - -0.5 715,606 - -1.0 715,606 - +0.6 715,674 - OHPLBJKB_00696 0.17 -0.9 715,674 - OHPLBJKB_00696 0.17 -0.1 715,733 + OHPLBJKB_00696 0.24 -1.1 715,733 + OHPLBJKB_00696 0.24 +0.2 715,734 - OHPLBJKB_00696 0.24 -1.3 715,783 + OHPLBJKB_00696 0.29 +0.6 715,783 + OHPLBJKB_00696 0.29 -1.2 715,814 - OHPLBJKB_00696 0.33 -0.1 715,821 + OHPLBJKB_00696 0.34 -0.5 715,868 + OHPLBJKB_00696 0.39 -2.2 715,868 + OHPLBJKB_00696 0.39 +0.3 715,868 + OHPLBJKB_00696 0.39 +0.9 715,868 + OHPLBJKB_00696 0.39 -1.2 715,868 + OHPLBJKB_00696 0.39 +1.6 715,868 + OHPLBJKB_00696 0.39 -1.3 715,869 - OHPLBJKB_00696 0.39 +0.1 715,869 - OHPLBJKB_00696 0.39 -0.7 715,869 - OHPLBJKB_00696 0.39 -0.1 715,869 - OHPLBJKB_00696 0.39 -2.9 715,869 - OHPLBJKB_00696 0.39 -0.2 716,015 + OHPLBJKB_00696 0.55 +0.4 716,016 - OHPLBJKB_00696 0.56 -0.4 716,170 + OHPLBJKB_00696 0.73 -1.6 716,170 + OHPLBJKB_00696 0.73 +0.1 716,226 + OHPLBJKB_00696 0.79 -0.0 716,227 - OHPLBJKB_00696 0.79 -0.9 716,287 + OHPLBJKB_00696 0.86 +0.2 716,287 + OHPLBJKB_00696 0.86 +0.7 716,287 + OHPLBJKB_00696 0.86 +0.2 716,287 + OHPLBJKB_00696 0.86 +0.4 716,288 - OHPLBJKB_00696 0.86 -0.4 716,288 - OHPLBJKB_00696 0.86 -1.9 716,288 - OHPLBJKB_00696 0.86 +0.3 716,374 + +1.6 716,374 + +0.0 716,375 - -0.3 716,375 - -0.8 716,375 - -1.3 716,375 - -0.0 716,378 - -0.3 716,378 - -1.0 716,397 + -0.9 716,398 - +0.9 716,500 + +0.5 716,520 + +0.6 716,520 + +0.3 716,520 + -0.9 716,520 + +0.4 716,521 - -2.3 716,521 - -0.0 716,521 - +0.1 716,521 - +0.3 716,522 + -0.2 716,523 - -0.3 716,565 - +0.4 716,565 - -0.4 716,565 - -0.3 716,565 - -0.3 716,579 + -0.2 716,580 - +1.2 716,583 + -0.5 716,584 - +0.2 716,598 + +0.9 716,598 + +0.3 716,598 + +0.0 716,598 + +0.3 716,598 + +1.3 716,599 - -2.0 716,599 - -2.0 716,626 + -0.7 716,626 + +0.6 716,626 + +0.9 716,626 + +0.1 716,626 + +0.3 716,626 + -0.3 716,626 + +0.3 716,627 - -1.3 716,627 - -0.1 716,627 - -1.1 716,627 - -0.2 716,627 - +0.5 716,627 - +0.9 716,627 - +1.0 716,627 - -0.9 716,657 - OHPLBJKB_00697 0.12 -0.7 716,731 - OHPLBJKB_00697 0.27 -0.3 716,731 - OHPLBJKB_00697 0.27 -0.6 716,924 + OHPLBJKB_00697 0.66 -0.1 716,924 + OHPLBJKB_00697 0.66 +1.0 716,925 - OHPLBJKB_00697 0.66 -0.6 716,925 - OHPLBJKB_00697 0.66 -1.4 716,925 - OHPLBJKB_00697 0.66 +0.5 717,013 + OHPLBJKB_00697 0.84 -0.1 717,013 + OHPLBJKB_00697 0.84 +0.3 717,014 - OHPLBJKB_00697 0.84 +0.2 717,014 - OHPLBJKB_00697 0.84 +0.8 717,014 - OHPLBJKB_00697 0.84 +0.4 717,014 - OHPLBJKB_00697 0.84 -1.2 717,014 - OHPLBJKB_00697 0.84 -0.4 717,014 - OHPLBJKB_00697 0.84 +0.4 717,062 - +1.4 717,085 - -1.2 717,085 - -0.3 717,127 - +0.7 717,127 - +1.0 717,139 - -2.4 717,139 - +2.1 717,213 + -0.3 717,213 + -0.5 717,251 - OHPLBJKB_00698 0.11 +0.9 717,426 + OHPLBJKB_00698 0.28 -1.1 717,426 + OHPLBJKB_00698 0.28 +0.2 717,427 - OHPLBJKB_00698 0.28 +0.8 717,508 - OHPLBJKB_00698 0.36 -1.1 717,508 - OHPLBJKB_00698 0.36 +0.2 717,517 - OHPLBJKB_00698 0.37 -0.6 717,517 - OHPLBJKB_00698 0.37 +0.6 717,562 - OHPLBJKB_00698 0.41 -0.6 717,581 - OHPLBJKB_00698 0.43 +0.4 717,604 + OHPLBJKB_00698 0.45 -0.2 717,605 - OHPLBJKB_00698 0.45 +0.2 717,683 + OHPLBJKB_00698 0.53 -0.1 717,683 + OHPLBJKB_00698 0.53 +0.2 717,684 - OHPLBJKB_00698 0.53 +0.0 717,684 - OHPLBJKB_00698 0.53 -1.4 717,684 - OHPLBJKB_00698 0.53 +0.7 717,782 + OHPLBJKB_00698 0.62 -0.3 717,782 + OHPLBJKB_00698 0.62 +0.6 717,783 - OHPLBJKB_00698 0.62 +2.3 717,783 - OHPLBJKB_00698 0.62 -1.0 717,783 - OHPLBJKB_00698 0.62 +0.3 717,830 + OHPLBJKB_00698 0.67 -0.4 717,831 - OHPLBJKB_00698 0.67 +0.3 717,831 - OHPLBJKB_00698 0.67 -0.5 717,831 - OHPLBJKB_00698 0.67 -0.2 717,831 - OHPLBJKB_00698 0.67 +0.2 717,834 + OHPLBJKB_00698 0.67 +0.2 717,834 + OHPLBJKB_00698 0.67 -0.3 717,835 - OHPLBJKB_00698 0.67 +1.3 717,835 - OHPLBJKB_00698 0.67 -1.5 717,870 + OHPLBJKB_00698 0.71 -0.5 717,871 - OHPLBJKB_00698 0.71 +0.7 717,889 - OHPLBJKB_00698 0.73 -0.5 717,894 + OHPLBJKB_00698 0.73 -0.7 717,895 - OHPLBJKB_00698 0.73 -0.9 717,895 - OHPLBJKB_00698 0.73 +0.6 717,988 + OHPLBJKB_00698 0.82 -1.6 718,023 + OHPLBJKB_00698 0.85 -0.1 718,078 + +0.0
Or see this region's nucleotide sequence