Experiment: B-glucan from yeast 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1181_RS07780 and HMPREF1181_RS07785 are separated by 76 nucleotides HMPREF1181_RS07785 and HMPREF1181_RS07790 are separated by 261 nucleotides HMPREF1181_RS07790 and HMPREF1181_RS07795 are separated by 136 nucleotides
HMPREF1181_RS07780: HMPREF1181_RS07780 - peptide-methionine (R)-S-oxide reductase MsrB, at 51,352 to 52,407
_RS07780
HMPREF1181_RS07785: HMPREF1181_RS07785 - antibiotic biosynthesis monooxygenase, at 52,484 to 52,759
_RS07785
HMPREF1181_RS07790: HMPREF1181_RS07790 - hypothetical protein, at 53,021 to 53,338
_RS07790
HMPREF1181_RS07795: HMPREF1181_RS07795 - uracil-DNA glycosylase, at 53,475 to 54,137
_RS07795
Position (kb) 52
53 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 51.527 kb on - strand, within HMPREF1181_RS07780 at 51.544 kb on - strand, within HMPREF1181_RS07780 at 51.651 kb on + strand, within HMPREF1181_RS07780 at 51.651 kb on + strand, within HMPREF1181_RS07780 at 51.651 kb on + strand, within HMPREF1181_RS07780 at 51.654 kb on + strand, within HMPREF1181_RS07780 at 51.662 kb on + strand, within HMPREF1181_RS07780 at 51.662 kb on + strand, within HMPREF1181_RS07780 at 51.662 kb on + strand, within HMPREF1181_RS07780 at 51.690 kb on - strand, within HMPREF1181_RS07780 at 51.737 kb on + strand, within HMPREF1181_RS07780 at 51.784 kb on - strand, within HMPREF1181_RS07780 at 51.894 kb on - strand, within HMPREF1181_RS07780 at 52.012 kb on - strand, within HMPREF1181_RS07780 at 52.016 kb on + strand, within HMPREF1181_RS07780 at 52.091 kb on + strand, within HMPREF1181_RS07780 at 52.134 kb on - strand, within HMPREF1181_RS07780 at 52.134 kb on - strand, within HMPREF1181_RS07780 at 52.168 kb on - strand, within HMPREF1181_RS07780 at 52.174 kb on - strand, within HMPREF1181_RS07780 at 52.188 kb on - strand, within HMPREF1181_RS07780 at 52.188 kb on - strand, within HMPREF1181_RS07780 at 52.191 kb on + strand, within HMPREF1181_RS07780 at 52.202 kb on - strand, within HMPREF1181_RS07780 at 52.204 kb on - strand, within HMPREF1181_RS07780 at 52.237 kb on + strand, within HMPREF1181_RS07780 at 52.238 kb on - strand, within HMPREF1181_RS07780 at 52.295 kb on + strand, within HMPREF1181_RS07780 at 52.372 kb on + strand at 52.373 kb on - strand at 52.373 kb on - strand at 52.407 kb on + strand at 52.407 kb on + strand at 52.419 kb on + strand at 52.421 kb on + strand at 52.422 kb on - strand at 52.422 kb on - strand at 52.422 kb on - strand at 52.472 kb on + strand at 52.482 kb on + strand at 52.647 kb on + strand, within HMPREF1181_RS07785 at 52.683 kb on - strand, within HMPREF1181_RS07785 at 52.753 kb on + strand at 52.760 kb on - strand at 52.765 kb on + strand at 52.766 kb on - strand at 52.832 kb on + strand at 52.858 kb on + strand at 52.859 kb on - strand at 52.868 kb on + strand at 52.968 kb on - strand at 52.998 kb on + strand at 52.999 kb on - strand at 52.999 kb on - strand at 53.044 kb on - strand at 53.055 kb on + strand, within HMPREF1181_RS07790 at 53.074 kb on - strand, within HMPREF1181_RS07790 at 53.091 kb on + strand, within HMPREF1181_RS07790 at 53.202 kb on - strand, within HMPREF1181_RS07790 at 53.217 kb on + strand, within HMPREF1181_RS07790 at 53.308 kb on - strand at 53.352 kb on + strand at 53.352 kb on + strand at 53.353 kb on - strand at 53.417 kb on + strand at 53.421 kb on + strand at 53.435 kb on - strand at 53.440 kb on + strand at 53.488 kb on + strand at 53.513 kb on - strand at 53.552 kb on - strand, within HMPREF1181_RS07795 at 53.726 kb on - strand, within HMPREF1181_RS07795
Per-strain Table
Position Strand Gene LocusTag Fraction B-glucan from yeast 2.5 mg/mL (C) remove 51,527 - HMPREF1181_RS07780 0.17 +0.6 51,544 - HMPREF1181_RS07780 0.18 +0.2 51,651 + HMPREF1181_RS07780 0.28 -0.9 51,651 + HMPREF1181_RS07780 0.28 -0.6 51,651 + HMPREF1181_RS07780 0.28 +0.0 51,654 + HMPREF1181_RS07780 0.29 -0.2 51,662 + HMPREF1181_RS07780 0.29 -0.7 51,662 + HMPREF1181_RS07780 0.29 -0.9 51,662 + HMPREF1181_RS07780 0.29 -0.8 51,690 - HMPREF1181_RS07780 0.32 +0.9 51,737 + HMPREF1181_RS07780 0.36 +1.0 51,784 - HMPREF1181_RS07780 0.41 -0.3 51,894 - HMPREF1181_RS07780 0.51 -0.0 52,012 - HMPREF1181_RS07780 0.62 +0.2 52,016 + HMPREF1181_RS07780 0.63 -0.4 52,091 + HMPREF1181_RS07780 0.70 -1.3 52,134 - HMPREF1181_RS07780 0.74 -1.4 52,134 - HMPREF1181_RS07780 0.74 +0.5 52,168 - HMPREF1181_RS07780 0.77 +0.2 52,174 - HMPREF1181_RS07780 0.78 +0.0 52,188 - HMPREF1181_RS07780 0.79 -1.4 52,188 - HMPREF1181_RS07780 0.79 +0.7 52,191 + HMPREF1181_RS07780 0.79 -0.0 52,202 - HMPREF1181_RS07780 0.80 -1.0 52,204 - HMPREF1181_RS07780 0.81 +0.5 52,237 + HMPREF1181_RS07780 0.84 -2.2 52,238 - HMPREF1181_RS07780 0.84 -0.0 52,295 + HMPREF1181_RS07780 0.89 -0.2 52,372 + +0.4 52,373 - -1.2 52,373 - -0.6 52,407 + -0.3 52,407 + +2.6 52,419 + -1.2 52,421 + -0.5 52,422 - -1.8 52,422 - +0.3 52,422 - -0.1 52,472 + -0.2 52,482 + +0.8 52,647 + HMPREF1181_RS07785 0.59 +1.0 52,683 - HMPREF1181_RS07785 0.72 -0.6 52,753 + -1.3 52,760 - +0.3 52,765 + -0.0 52,766 - +0.2 52,832 + -0.2 52,858 + -1.0 52,859 - +0.4 52,868 + +0.3 52,968 - -0.9 52,998 + -0.2 52,999 - -0.9 52,999 - +0.6 53,044 - -0.5 53,055 + HMPREF1181_RS07790 0.11 +2.8 53,074 - HMPREF1181_RS07790 0.17 +0.8 53,091 + HMPREF1181_RS07790 0.22 +0.1 53,202 - HMPREF1181_RS07790 0.57 +0.3 53,217 + HMPREF1181_RS07790 0.62 -0.3 53,308 - +0.2 53,352 + +0.7 53,352 + -0.9 53,353 - -0.8 53,417 + -0.0 53,421 + -0.4 53,435 - -0.6 53,440 + -0.0 53,488 + +0.2 53,513 - -0.1 53,552 - HMPREF1181_RS07795 0.12 +1.4 53,726 - HMPREF1181_RS07795 0.38 +0.5
Or see this region's nucleotide sequence