Strain Fitness in Escherichia coli HS(pFamp)R (ATCC 700891) around OHPLBJKB_03395

Experiment: HSDP5

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	HSDP5
3,548,472	+		OHPLBJKB_03393	0.76	-0.0
3,548,527	+		OHPLBJKB_03393	0.84	+0.7
3,548,552	-		OHPLBJKB_03393	0.88	+2.9
3,548,651	+				+0.4
3,548,668	+				+0.1
3,548,668	+				+0.1
3,548,734	+				-0.7
3,548,741	+				-0.0
3,548,742	-				+0.7
3,548,742	-				+1.6
3,548,742	-				-0.6
3,548,742	-				+1.4
3,548,742	-				+0.6
3,548,742	-				-2.8
3,548,773	-				+0.1
3,548,831	-				-0.4
3,548,918	-		OHPLBJKB_03394	0.30	-1.8
3,548,918	-		OHPLBJKB_03394	0.30	-0.4
3,548,921	+		OHPLBJKB_03394	0.30	-1.0
3,548,921	+		OHPLBJKB_03394	0.30	-0.8
3,548,921	+		OHPLBJKB_03394	0.30	-1.3
3,548,921	+		OHPLBJKB_03394	0.30	-0.5
3,548,921	+		OHPLBJKB_03394	0.30	-0.0
3,548,921	+		OHPLBJKB_03394	0.30	-0.7
3,548,921	+		OHPLBJKB_03394	0.30	+1.1
3,548,921	+		OHPLBJKB_03394	0.30	-0.9
3,548,921	+		OHPLBJKB_03394	0.30	-1.0
3,548,921	+		OHPLBJKB_03394	0.30	-0.4
3,548,922	-		OHPLBJKB_03394	0.31	+1.6
3,548,922	-		OHPLBJKB_03394	0.31	+0.7
3,548,922	-		OHPLBJKB_03394	0.31	-0.0
3,548,922	-		OHPLBJKB_03394	0.31	-1.4
3,548,922	-		OHPLBJKB_03394	0.31	+0.3
3,548,922	-		OHPLBJKB_03394	0.31	-1.0
3,548,922	-		OHPLBJKB_03394	0.31	+0.1
3,548,922	-		OHPLBJKB_03394	0.31	-0.1
3,549,147	+				+1.0
3,549,147	+				-0.4
3,549,217	-				-0.9
3,549,217	-				-0.6
3,549,295	+				+1.6
3,549,308	+				-0.6
3,549,368	+				+0.2
3,549,369	-				+0.8
3,549,369	-				+0.2
3,549,414	-				+0.7
3,549,465	-				-0.1
3,549,535	+				-1.2
3,549,536	-				-1.1
3,549,660	+		OHPLBJKB_03395	0.16	+0.5
3,549,715	+		OHPLBJKB_03395	0.21	+1.3
3,549,715	+		OHPLBJKB_03395	0.21	+2.5
3,549,715	+		OHPLBJKB_03395	0.21	-1.4
3,549,715	+		OHPLBJKB_03395	0.21	-1.4
3,549,715	+		OHPLBJKB_03395	0.21	+0.4
3,549,715	+		OHPLBJKB_03395	0.21	-1.4
3,549,715	+		OHPLBJKB_03395	0.21	-2.6
3,549,716	-		OHPLBJKB_03395	0.21	+0.8
3,549,716	-		OHPLBJKB_03395	0.21	+0.2
3,549,716	-		OHPLBJKB_03395	0.21	-1.0
3,549,716	-		OHPLBJKB_03395	0.21	+0.1
3,549,716	-		OHPLBJKB_03395	0.21	-1.0
3,549,716	-		OHPLBJKB_03395	0.21	-0.0
3,549,716	-		OHPLBJKB_03395	0.21	+0.2
3,549,717	+		OHPLBJKB_03395	0.21	+0.2
3,549,717	+		OHPLBJKB_03395	0.21	-0.9
3,549,762	+		OHPLBJKB_03395	0.25	+0.5
3,549,762	+		OHPLBJKB_03395	0.25	+0.2
3,549,762	+		OHPLBJKB_03395	0.25	-0.3
3,549,763	-		OHPLBJKB_03395	0.25	-1.0
3,549,875	+		OHPLBJKB_03395	0.35	+0.2
3,549,875	+		OHPLBJKB_03395	0.35	+0.1
3,549,878	-		OHPLBJKB_03395	0.35	-0.1
3,549,924	+		OHPLBJKB_03395	0.39	-0.5
3,549,925	-		OHPLBJKB_03395	0.39	-1.6
3,550,024	+		OHPLBJKB_03395	0.48	+0.0
3,550,025	-		OHPLBJKB_03395	0.48	-1.2
3,550,025	-		OHPLBJKB_03395	0.48	+0.8
3,550,240	-		OHPLBJKB_03395	0.66	+0.5
3,550,420	+		OHPLBJKB_03395	0.82	+1.0
3,550,420	+		OHPLBJKB_03395	0.82	+0.4
3,550,421	-		OHPLBJKB_03395	0.82	-2.2
3,550,421	-		OHPLBJKB_03395	0.82	+0.2
3,550,421	-		OHPLBJKB_03395	0.82	+0.5
3,550,468	+		OHPLBJKB_03395	0.86	-0.6
3,550,469	-		OHPLBJKB_03395	0.86	-0.9
3,550,511	+		OHPLBJKB_03395	0.90	-0.5
3,550,511	+		OHPLBJKB_03395	0.90	-0.9
3,550,567	+				+0.1
3,550,568	-				+1.1
3,550,569	+				-2.5
3,550,569	+				-1.0
3,550,570	-				-1.5
3,550,570	-				+1.5
3,550,570	-				+1.4
3,550,641	+				+0.7
3,550,701	-		OHPLBJKB_03396	0.74	+0.5
3,550,712	+		OHPLBJKB_03396	0.88	+0.5
3,550,712	+		OHPLBJKB_03396	0.88	-0.3
3,550,713	-				-0.8
3,550,713	-				+0.2
3,550,713	-				-0.8
3,550,812	-				-0.6
3,550,833	-				-1.9
3,550,851	+				-0.0
3,550,875	+				-1.0
3,550,875	+				-0.5
3,550,876	-				-1.7
3,550,876	-				-0.1
3,550,876	-				-0.9
3,550,876	-				+0.2
3,550,876	-				-1.0
3,550,996	-		OHPLBJKB_03397	0.13	-2.0
3,551,092	+		OHPLBJKB_03397	0.20	+1.3
3,551,238	-		OHPLBJKB_03397	0.32	+1.2
3,551,238	-		OHPLBJKB_03397	0.32	-1.0
3,551,270	+		OHPLBJKB_03397	0.35	-0.9
3,551,329	+		OHPLBJKB_03397	0.39	-0.7
3,551,329	+		OHPLBJKB_03397	0.39	-0.0
3,551,329	+		OHPLBJKB_03397	0.39	-1.7
3,551,329	+		OHPLBJKB_03397	0.39	-0.5
3,551,329	+		OHPLBJKB_03397	0.39	+1.0
3,551,329	+		OHPLBJKB_03397	0.39	+1.5
3,551,329	+		OHPLBJKB_03397	0.39	+0.5
3,551,329	+		OHPLBJKB_03397	0.39	-0.2
3,551,329	+		OHPLBJKB_03397	0.39	-0.1
3,551,330	-		OHPLBJKB_03397	0.39	-0.0
3,551,330	-		OHPLBJKB_03397	0.39	+0.5
3,551,330	-		OHPLBJKB_03397	0.39	-0.5
3,551,330	-		OHPLBJKB_03397	0.39	-0.6
3,551,330	-		OHPLBJKB_03397	0.39	+0.8
3,551,330	-		OHPLBJKB_03397	0.39	-1.0
3,551,330	-		OHPLBJKB_03397	0.39	+0.2
3,551,330	-		OHPLBJKB_03397	0.39	-1.2
3,551,330	-		OHPLBJKB_03397	0.39	+0.4
3,551,330	-		OHPLBJKB_03397	0.39	+0.1
3,551,330	-		OHPLBJKB_03397	0.39	+0.8
3,551,372	+		OHPLBJKB_03397	0.43	+1.2
3,551,373	-		OHPLBJKB_03397	0.43	-0.6
3,551,390	+		OHPLBJKB_03397	0.44	-0.9
3,551,406	+		OHPLBJKB_03397	0.46	+1.4
3,551,407	-		OHPLBJKB_03397	0.46	+0.2
3,551,407	-		OHPLBJKB_03397	0.46	-0.7
3,551,407	-		OHPLBJKB_03397	0.46	+0.5
3,551,407	-		OHPLBJKB_03397	0.46	-0.1
3,551,407	-		OHPLBJKB_03397	0.46	-1.0
3,551,410	+		OHPLBJKB_03397	0.46	-1.0
3,551,417	+		OHPLBJKB_03397	0.46	-1.8
3,551,425	+		OHPLBJKB_03397	0.47	+1.5
3,551,425	+		OHPLBJKB_03397	0.47	+0.2
3,551,470	+		OHPLBJKB_03397	0.51	-0.0
3,551,471	-		OHPLBJKB_03397	0.51	-0.1
3,551,511	+		OHPLBJKB_03397	0.54	-0.8
3,551,511	+		OHPLBJKB_03397	0.54	+0.7
3,551,511	+		OHPLBJKB_03397	0.54	+0.7
3,551,511	+		OHPLBJKB_03397	0.54	-0.6
3,551,511	+		OHPLBJKB_03397	0.54	-2.1
3,551,512	-		OHPLBJKB_03397	0.54	+2.0
3,551,512	-		OHPLBJKB_03397	0.54	-1.2
3,551,512	-		OHPLBJKB_03397	0.54	+0.2
3,551,512	-		OHPLBJKB_03397	0.54	-0.3
3,551,512	-		OHPLBJKB_03397	0.54	+1.1
3,551,557	+		OHPLBJKB_03397	0.58	-0.5