Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS00635

Experiment: Experiment:TE2, Cucumber 2 Petiole 1 (TE2-S-C2-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 2 Petiole 1 (TE2-S-C2-P1)
130,095	-	adhP	LU632_RS00630	0.44	-0.9
130,146	-	adhP	LU632_RS00630	0.50	-0.8
130,146	-	adhP	LU632_RS00630	0.50	-0.1
130,165	+	adhP	LU632_RS00630	0.51	-1.7
130,181	+	adhP	LU632_RS00630	0.53	-0.2
130,225	+	adhP	LU632_RS00630	0.57	-0.9
130,226	-	adhP	LU632_RS00630	0.57	-0.1
130,226	-	adhP	LU632_RS00630	0.57	-0.8
130,275	+	adhP	LU632_RS00630	0.62	-0.6
130,370	-	adhP	LU632_RS00630	0.72	-2.1
130,585	+				+0.9
130,586	-				-1.6
130,588	+				+1.3
130,656	-				-1.0
130,730	-				+1.2
130,855	+				+1.9
130,867	-				-2.9
130,943	+				+1.3
131,001	-				+0.2
131,022	+				-3.7
131,137	-		LU632_RS00635	0.32	+0.3
131,156	+		LU632_RS00635	0.43	-0.0
131,204	+		LU632_RS00635	0.69	-1.6
131,303	+				+1.8
131,304	-				-0.2
131,308	+				+2.7
131,309	-				+1.5
131,309	-				+0.1
131,331	-				+0.1
131,365	+				+1.4
131,365	+				+6.3
131,366	-				-1.1
131,366	-				+0.6
131,369	-				-1.3
131,396	+				+0.4
131,427	-				+0.8
131,437	-				-0.6
131,683	+				-0.9
131,846	+				+0.9